Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2743 and GFF2744 overlap by 4 nucleotides GFF2744 and GFF2745 overlap by 4 nucleotides
GFF2743 - hypothetical protein, at 442,488 to 443,591
GFF2743
GFF2744 - Vitamin B12 import system permease protein BtuC, at 443,588 to 444,682
GFF2744
GFF2745 - Iron(3+)-hydroxamate import ATP-binding protein FhuC, at 444,679 to 445,431
GFF2745
Position (kb) 443
444
445 Strain fitness (log2 ratio) -2
-1
0
1 at 442.890 kb on - strand, within GFF2743 at 442.890 kb on - strand, within GFF2743 at 442.890 kb on - strand, within GFF2743 at 442.918 kb on + strand, within GFF2743 at 442.918 kb on + strand, within GFF2743 at 443.020 kb on - strand, within GFF2743 at 443.020 kb on - strand, within GFF2743 at 443.022 kb on - strand, within GFF2743 at 443.467 kb on + strand, within GFF2743 at 443.468 kb on - strand, within GFF2743 at 443.468 kb on - strand, within GFF2743 at 443.559 kb on - strand at 443.663 kb on + strand at 443.663 kb on + strand at 443.762 kb on + strand, within GFF2744 at 443.763 kb on - strand, within GFF2744 at 443.763 kb on - strand, within GFF2744 at 444.029 kb on + strand, within GFF2744 at 444.029 kb on + strand, within GFF2744 at 444.029 kb on + strand, within GFF2744 at 444.029 kb on + strand, within GFF2744 at 444.030 kb on - strand, within GFF2744 at 444.030 kb on - strand, within GFF2744 at 444.030 kb on - strand, within GFF2744 at 444.030 kb on - strand, within GFF2744 at 444.030 kb on - strand, within GFF2744 at 444.592 kb on + strand at 444.592 kb on + strand at 444.901 kb on + strand, within GFF2745 at 444.944 kb on - strand, within GFF2745 at 445.273 kb on - strand, within GFF2745 at 445.335 kb on + strand, within GFF2745 at 445.335 kb on + strand, within GFF2745 at 445.335 kb on + strand, within GFF2745 at 445.336 kb on - strand, within GFF2745 at 445.362 kb on - strand at 445.537 kb on + strand at 445.537 kb on + strand at 445.537 kb on + strand at 445.537 kb on + strand at 445.538 kb on - strand at 445.538 kb on - strand at 445.538 kb on - strand at 445.538 kb on - strand at 445.538 kb on - strand at 445.538 kb on - strand at 445.612 kb on - strand at 445.662 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 442,890 - GFF2743 0.36 -0.5 442,890 - GFF2743 0.36 -0.6 442,890 - GFF2743 0.36 -0.4 442,918 + GFF2743 0.39 -0.4 442,918 + GFF2743 0.39 +0.1 443,020 - GFF2743 0.48 -0.3 443,020 - GFF2743 0.48 +0.3 443,022 - GFF2743 0.48 +0.9 443,467 + GFF2743 0.89 +0.1 443,468 - GFF2743 0.89 +0.1 443,468 - GFF2743 0.89 +1.4 443,559 - -0.5 443,663 + -1.0 443,663 + +0.2 443,762 + GFF2744 0.16 -1.1 443,763 - GFF2744 0.16 -0.2 443,763 - GFF2744 0.16 -0.8 444,029 + GFF2744 0.40 -0.3 444,029 + GFF2744 0.40 +0.3 444,029 + GFF2744 0.40 -0.1 444,029 + GFF2744 0.40 -0.0 444,030 - GFF2744 0.40 -1.0 444,030 - GFF2744 0.40 -2.0 444,030 - GFF2744 0.40 +0.4 444,030 - GFF2744 0.40 +0.2 444,030 - GFF2744 0.40 +0.1 444,592 + -1.3 444,592 + +1.2 444,901 + GFF2745 0.29 -0.1 444,944 - GFF2745 0.35 +0.5 445,273 - GFF2745 0.79 +0.0 445,335 + GFF2745 0.87 -0.6 445,335 + GFF2745 0.87 +1.0 445,335 + GFF2745 0.87 +0.3 445,336 - GFF2745 0.87 -0.1 445,362 - +1.1 445,537 + -0.7 445,537 + +0.3 445,537 + -0.0 445,537 + -0.3 445,538 - -0.2 445,538 - +0.3 445,538 - -0.0 445,538 - +0.5 445,538 - -0.1 445,538 - +0.3 445,612 - -0.1 445,662 - -0.3
Or see this region's nucleotide sequence