Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2621 and GFF2622 are separated by 468 nucleotides GFF2622 and GFF2623 are separated by 117 nucleotides
GFF2621 - hypothetical protein, at 304,329 to 306,665
GFF2621
GFF2622 - hypothetical protein, at 307,134 to 308,654
GFF2622
GFF2623 - hypothetical protein, at 308,772 to 309,563
GFF2623
Position (kb) 307
308
309 Strain fitness (log2 ratio) -1
0
1
2 at 306.235 kb on - strand, within GFF2621 at 306.235 kb on - strand, within GFF2621 at 306.541 kb on + strand at 306.541 kb on + strand at 306.541 kb on + strand at 306.541 kb on + strand at 306.541 kb on + strand at 306.541 kb on + strand at 306.542 kb on - strand at 306.542 kb on - strand at 306.542 kb on - strand at 306.542 kb on - strand at 306.542 kb on - strand at 306.542 kb on - strand at 306.542 kb on - strand at 306.593 kb on + strand at 306.645 kb on + strand at 306.645 kb on + strand at 306.661 kb on + strand at 306.665 kb on + strand at 306.665 kb on + strand at 306.665 kb on + strand at 306.665 kb on + strand at 306.665 kb on + strand at 306.665 kb on + strand at 306.666 kb on - strand at 306.666 kb on - strand at 306.666 kb on - strand at 306.666 kb on - strand at 306.666 kb on - strand at 306.666 kb on - strand at 306.666 kb on - strand at 306.666 kb on - strand at 306.689 kb on + strand at 306.689 kb on + strand at 306.690 kb on - strand at 306.690 kb on - strand at 306.690 kb on - strand at 306.714 kb on - strand at 306.744 kb on - strand at 306.801 kb on - strand at 306.801 kb on - strand at 306.801 kb on - strand at 306.869 kb on - strand at 306.881 kb on + strand at 306.881 kb on + strand at 306.881 kb on + strand at 306.881 kb on + strand at 306.881 kb on + strand at 306.881 kb on + strand at 306.882 kb on - strand at 306.882 kb on - strand at 306.882 kb on - strand at 306.882 kb on - strand at 306.982 kb on + strand at 306.982 kb on + strand at 306.982 kb on + strand at 307.014 kb on - strand at 307.041 kb on - strand at 307.041 kb on - strand at 307.130 kb on + strand at 307.130 kb on + strand at 307.130 kb on + strand at 307.130 kb on + strand at 307.130 kb on + strand at 307.130 kb on + strand at 307.131 kb on - strand at 307.131 kb on - strand at 307.131 kb on - strand at 307.131 kb on - strand at 307.131 kb on - strand at 307.159 kb on - strand at 307.159 kb on - strand at 307.159 kb on - strand at 307.159 kb on - strand at 307.159 kb on - strand at 307.159 kb on - strand at 307.159 kb on - strand at 307.159 kb on - strand at 307.194 kb on - strand at 307.214 kb on + strand at 307.215 kb on - strand at 307.231 kb on - strand at 307.231 kb on - strand at 307.231 kb on - strand at 307.274 kb on + strand at 307.274 kb on + strand at 307.275 kb on - strand at 307.280 kb on + strand at 307.281 kb on - strand at 307.281 kb on - strand at 307.367 kb on - strand, within GFF2622 at 307.367 kb on - strand, within GFF2622 at 307.560 kb on + strand, within GFF2622 at 307.560 kb on + strand, within GFF2622 at 307.560 kb on + strand, within GFF2622 at 307.560 kb on + strand, within GFF2622 at 307.560 kb on + strand, within GFF2622 at 307.561 kb on - strand, within GFF2622 at 307.561 kb on - strand, within GFF2622 at 307.561 kb on - strand, within GFF2622 at 307.561 kb on - strand, within GFF2622 at 307.609 kb on + strand, within GFF2622 at 307.609 kb on + strand, within GFF2622 at 307.609 kb on + strand, within GFF2622 at 307.610 kb on - strand, within GFF2622 at 307.610 kb on - strand, within GFF2622 at 307.610 kb on - strand, within GFF2622 at 307.610 kb on - strand, within GFF2622 at 307.796 kb on + strand, within GFF2622 at 307.797 kb on - strand, within GFF2622 at 307.886 kb on + strand, within GFF2622 at 307.886 kb on + strand, within GFF2622 at 307.899 kb on + strand, within GFF2622 at 307.899 kb on + strand, within GFF2622 at 307.899 kb on + strand, within GFF2622 at 307.900 kb on - strand, within GFF2622 at 307.900 kb on - strand, within GFF2622 at 307.900 kb on - strand, within GFF2622 at 307.939 kb on - strand, within GFF2622 at 307.948 kb on + strand, within GFF2622 at 307.949 kb on - strand, within GFF2622 at 307.949 kb on - strand, within GFF2622 at 308.065 kb on + strand, within GFF2622 at 308.065 kb on + strand, within GFF2622 at 308.066 kb on - strand, within GFF2622 at 308.066 kb on - strand, within GFF2622 at 308.066 kb on - strand, within GFF2622 at 308.120 kb on + strand, within GFF2622 at 308.295 kb on + strand, within GFF2622 at 308.340 kb on + strand, within GFF2622 at 308.341 kb on - strand, within GFF2622 at 308.341 kb on - strand, within GFF2622 at 308.413 kb on + strand, within GFF2622 at 308.413 kb on + strand, within GFF2622 at 308.413 kb on + strand, within GFF2622 at 308.413 kb on + strand, within GFF2622 at 308.414 kb on - strand, within GFF2622 at 308.461 kb on + strand, within GFF2622 at 308.471 kb on - strand, within GFF2622 at 308.471 kb on - strand, within GFF2622 at 308.471 kb on - strand, within GFF2622 at 308.556 kb on + strand at 308.556 kb on + strand at 308.557 kb on - strand at 308.653 kb on - strand at 308.773 kb on + strand at 308.773 kb on + strand at 308.773 kb on + strand at 308.773 kb on + strand at 308.773 kb on + strand at 308.774 kb on - strand at 308.774 kb on - strand at 308.774 kb on - strand at 308.774 kb on - strand at 308.774 kb on - strand at 308.774 kb on - strand at 308.839 kb on + strand at 308.839 kb on + strand at 308.840 kb on - strand at 308.935 kb on + strand, within GFF2623 at 308.935 kb on + strand, within GFF2623 at 308.935 kb on + strand, within GFF2623 at 308.935 kb on + strand, within GFF2623 at 308.935 kb on + strand, within GFF2623 at 308.935 kb on + strand, within GFF2623 at 308.936 kb on - strand, within GFF2623 at 308.936 kb on - strand, within GFF2623 at 308.936 kb on - strand, within GFF2623 at 308.936 kb on - strand, within GFF2623 at 308.992 kb on + strand, within GFF2623 at 308.993 kb on - strand, within GFF2623 at 309.058 kb on - strand, within GFF2623 at 309.120 kb on + strand, within GFF2623 at 309.120 kb on + strand, within GFF2623 at 309.120 kb on + strand, within GFF2623 at 309.120 kb on + strand, within GFF2623 at 309.121 kb on - strand, within GFF2623 at 309.121 kb on - strand, within GFF2623 at 309.198 kb on + strand, within GFF2623 at 309.316 kb on + strand, within GFF2623 at 309.316 kb on + strand, within GFF2623 at 309.316 kb on + strand, within GFF2623 at 309.316 kb on + strand, within GFF2623 at 309.317 kb on - strand, within GFF2623 at 309.499 kb on + strand at 309.499 kb on + strand at 309.499 kb on + strand at 309.499 kb on + strand at 309.499 kb on + strand at 309.500 kb on - strand at 309.500 kb on - strand at 309.500 kb on - strand at 309.500 kb on - strand at 309.530 kb on + strand at 309.530 kb on + strand at 309.531 kb on - strand at 309.531 kb on - strand at 309.531 kb on - strand at 309.533 kb on + strand at 309.533 kb on + strand at 309.534 kb on - strand at 309.534 kb on - strand at 309.570 kb on + strand at 309.570 kb on + strand at 309.570 kb on + strand at 309.571 kb on - strand at 309.571 kb on - strand at 309.571 kb on - strand at 309.571 kb on - strand at 309.571 kb on - strand at 309.571 kb on - strand at 309.571 kb on - strand at 309.571 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 306,235 - GFF2621 0.82 -1.4 306,235 - GFF2621 0.82 +0.2 306,541 + +1.4 306,541 + +0.1 306,541 + -0.2 306,541 + -0.3 306,541 + -0.3 306,541 + +0.4 306,542 - -0.1 306,542 - -0.2 306,542 - +0.1 306,542 - -0.0 306,542 - +0.3 306,542 - -0.3 306,542 - +0.3 306,593 + -0.7 306,645 + +0.3 306,645 + +1.2 306,661 + +0.4 306,665 + +0.3 306,665 + -0.7 306,665 + -1.1 306,665 + -0.4 306,665 + +0.2 306,665 + -0.3 306,666 - -0.2 306,666 - -0.3 306,666 - -0.3 306,666 - -0.2 306,666 - -0.3 306,666 - -0.1 306,666 - -0.2 306,666 - -1.0 306,689 + +0.6 306,689 + +0.9 306,690 - -0.5 306,690 - +1.8 306,690 - -0.6 306,714 - -0.0 306,744 - -0.0 306,801 - -0.1 306,801 - -0.1 306,801 - -0.8 306,869 - +0.2 306,881 + -0.1 306,881 + +0.6 306,881 + -0.7 306,881 + -0.3 306,881 + -0.2 306,881 + -0.7 306,882 - -0.3 306,882 - +0.3 306,882 - +0.1 306,882 - -0.1 306,982 + -0.3 306,982 + +0.0 306,982 + +0.0 307,014 - -0.1 307,041 - -0.6 307,041 - +0.2 307,130 + -1.3 307,130 + +1.1 307,130 + -0.4 307,130 + +0.0 307,130 + -0.2 307,130 + -0.1 307,131 - +1.5 307,131 - +0.1 307,131 - -0.1 307,131 - -1.1 307,131 - -0.6 307,159 - +1.3 307,159 - +0.3 307,159 - +0.0 307,159 - -0.3 307,159 - -1.3 307,159 - -0.1 307,159 - +0.5 307,159 - +0.3 307,194 - -0.5 307,214 + +0.7 307,215 - -0.4 307,231 - +0.4 307,231 - +0.8 307,231 - -0.5 307,274 + +0.1 307,274 + +0.3 307,275 - -0.9 307,280 + +0.7 307,281 - +0.5 307,281 - +0.1 307,367 - GFF2622 0.15 -0.2 307,367 - GFF2622 0.15 -1.0 307,560 + GFF2622 0.28 +0.2 307,560 + GFF2622 0.28 +0.5 307,560 + GFF2622 0.28 -0.2 307,560 + GFF2622 0.28 -1.0 307,560 + GFF2622 0.28 +0.2 307,561 - GFF2622 0.28 +0.2 307,561 - GFF2622 0.28 +0.0 307,561 - GFF2622 0.28 +0.3 307,561 - GFF2622 0.28 -0.1 307,609 + GFF2622 0.31 -0.1 307,609 + GFF2622 0.31 -0.0 307,609 + GFF2622 0.31 -0.7 307,610 - GFF2622 0.31 +0.5 307,610 - GFF2622 0.31 +0.3 307,610 - GFF2622 0.31 -1.0 307,610 - GFF2622 0.31 -0.6 307,796 + GFF2622 0.44 -0.3 307,797 - GFF2622 0.44 -0.0 307,886 + GFF2622 0.49 -0.1 307,886 + GFF2622 0.49 -0.7 307,899 + GFF2622 0.50 -0.6 307,899 + GFF2622 0.50 -0.0 307,899 + GFF2622 0.50 +0.4 307,900 - GFF2622 0.50 -0.4 307,900 - GFF2622 0.50 +0.2 307,900 - GFF2622 0.50 +0.1 307,939 - GFF2622 0.53 -0.4 307,948 + GFF2622 0.54 +0.6 307,949 - GFF2622 0.54 -0.3 307,949 - GFF2622 0.54 +0.1 308,065 + GFF2622 0.61 +0.8 308,065 + GFF2622 0.61 -0.2 308,066 - GFF2622 0.61 +0.9 308,066 - GFF2622 0.61 +0.5 308,066 - GFF2622 0.61 -1.1 308,120 + GFF2622 0.65 +0.5 308,295 + GFF2622 0.76 +0.1 308,340 + GFF2622 0.79 +0.2 308,341 - GFF2622 0.79 -0.2 308,341 - GFF2622 0.79 +0.9 308,413 + GFF2622 0.84 -0.3 308,413 + GFF2622 0.84 -0.0 308,413 + GFF2622 0.84 -1.1 308,413 + GFF2622 0.84 +0.5 308,414 - GFF2622 0.84 +0.4 308,461 + GFF2622 0.87 -0.4 308,471 - GFF2622 0.88 +0.1 308,471 - GFF2622 0.88 +0.3 308,471 - GFF2622 0.88 +0.2 308,556 + -1.1 308,556 + -0.7 308,557 - +0.5 308,653 - +0.3 308,773 + -0.3 308,773 + -0.1 308,773 + -0.5 308,773 + +0.0 308,773 + +0.3 308,774 - +1.0 308,774 - -0.0 308,774 - +0.2 308,774 - +0.2 308,774 - +0.3 308,774 - -0.2 308,839 + +0.2 308,839 + -1.0 308,840 - -1.0 308,935 + GFF2623 0.21 +0.3 308,935 + GFF2623 0.21 -0.5 308,935 + GFF2623 0.21 -0.8 308,935 + GFF2623 0.21 -0.7 308,935 + GFF2623 0.21 -0.3 308,935 + GFF2623 0.21 -0.1 308,936 - GFF2623 0.21 +0.0 308,936 - GFF2623 0.21 +0.3 308,936 - GFF2623 0.21 +0.3 308,936 - GFF2623 0.21 -0.3 308,992 + GFF2623 0.28 -0.2 308,993 - GFF2623 0.28 +0.3 309,058 - GFF2623 0.36 -0.4 309,120 + GFF2623 0.44 +0.7 309,120 + GFF2623 0.44 +0.5 309,120 + GFF2623 0.44 -0.5 309,120 + GFF2623 0.44 -0.2 309,121 - GFF2623 0.44 -0.4 309,121 - GFF2623 0.44 +0.4 309,198 + GFF2623 0.54 +0.1 309,316 + GFF2623 0.69 +1.0 309,316 + GFF2623 0.69 -0.0 309,316 + GFF2623 0.69 -0.0 309,316 + GFF2623 0.69 -0.2 309,317 - GFF2623 0.69 +1.0 309,499 + +0.4 309,499 + -0.1 309,499 + -0.7 309,499 + +0.1 309,499 + +0.8 309,500 - +0.1 309,500 - -1.2 309,500 - +0.7 309,500 - +0.0 309,530 + -0.8 309,530 + -0.8 309,531 - -0.2 309,531 - +0.6 309,531 - +0.5 309,533 + +0.1 309,533 + -0.0 309,534 - +1.1 309,534 - +0.3 309,570 + -0.3 309,570 + +0.4 309,570 + -0.4 309,571 - +0.1 309,571 - -0.3 309,571 - +0.5 309,571 - -1.0 309,571 - +0.9 309,571 - -0.5 309,571 - -0.5 309,571 - +0.1
Or see this region's nucleotide sequence