Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2603 and GFF2604 are separated by 384 nucleotides GFF2604 and GFF2605 are separated by 137 nucleotides GFF2605 and GFF2606 are separated by 459 nucleotides GFF2606 and GFF2607 are separated by 57 nucleotides
GFF2603 - hypothetical protein, at 289,791 to 290,714
GFF2603
GFF2604 - hypothetical protein, at 291,099 to 291,266
GFF2604
GFF2605 - hypothetical protein, at 291,404 to 291,820
GFF2605
GFF2606 - hypothetical protein, at 292,280 to 292,606
GFF2606
GFF2607 - hypothetical protein, at 292,664 to 292,882
GFF2607
Position (kb) 291
292 Strain fitness (log2 ratio) -1
0
1 at 290.795 kb on - strand at 291.264 kb on + strand at 291.264 kb on + strand at 291.265 kb on - strand at 291.265 kb on - strand at 291.265 kb on - strand at 291.270 kb on - strand at 291.275 kb on + strand at 291.275 kb on + strand at 291.275 kb on + strand at 291.275 kb on + strand at 291.275 kb on + strand at 291.276 kb on - strand at 291.276 kb on - strand at 291.276 kb on - strand at 291.276 kb on - strand at 291.333 kb on + strand at 291.333 kb on + strand at 291.334 kb on - strand at 291.338 kb on + strand at 291.447 kb on + strand, within GFF2605 at 291.448 kb on - strand, within GFF2605 at 291.467 kb on - strand, within GFF2605 at 291.524 kb on + strand, within GFF2605 at 291.524 kb on + strand, within GFF2605 at 291.524 kb on + strand, within GFF2605 at 291.525 kb on - strand, within GFF2605 at 291.684 kb on - strand, within GFF2605 at 291.684 kb on - strand, within GFF2605 at 291.760 kb on + strand, within GFF2605 at 291.760 kb on + strand, within GFF2605 at 291.760 kb on + strand, within GFF2605 at 291.760 kb on + strand, within GFF2605 at 291.761 kb on - strand, within GFF2605 at 292.277 kb on - strand at 292.277 kb on - strand at 292.527 kb on - strand, within GFF2606 at 292.527 kb on - strand, within GFF2606 at 292.552 kb on + strand, within GFF2606 at 292.552 kb on + strand, within GFF2606 at 292.646 kb on + strand at 292.646 kb on + strand at 292.646 kb on + strand at 292.646 kb on + strand at 292.647 kb on - strand at 292.728 kb on + strand, within GFF2607 at 292.728 kb on + strand, within GFF2607 at 292.777 kb on + strand, within GFF2607 at 292.777 kb on + strand, within GFF2607 at 292.777 kb on + strand, within GFF2607 at 292.777 kb on + strand, within GFF2607 at 292.778 kb on - strand, within GFF2607 at 292.778 kb on - strand, within GFF2607 at 292.778 kb on - strand, within GFF2607 at 292.779 kb on + strand, within GFF2607 at 292.779 kb on + strand, within GFF2607 at 292.779 kb on + strand, within GFF2607 at 292.779 kb on + strand, within GFF2607 at 292.780 kb on - strand, within GFF2607
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 290,795 - -0.7 291,264 + -0.5 291,264 + -0.0 291,265 - -0.3 291,265 - +0.6 291,265 - -0.5 291,270 - -0.7 291,275 + -0.3 291,275 + -0.7 291,275 + -1.0 291,275 + -0.1 291,275 + -0.3 291,276 - +0.3 291,276 - -0.7 291,276 - -0.3 291,276 - -0.2 291,333 + +0.4 291,333 + +0.5 291,334 - -0.5 291,338 + -0.3 291,447 + GFF2605 0.10 -0.4 291,448 - GFF2605 0.11 +0.0 291,467 - GFF2605 0.15 -0.1 291,524 + GFF2605 0.29 +0.4 291,524 + GFF2605 0.29 -0.3 291,524 + GFF2605 0.29 +1.1 291,525 - GFF2605 0.29 -0.4 291,684 - GFF2605 0.67 +1.5 291,684 - GFF2605 0.67 -0.2 291,760 + GFF2605 0.85 +0.4 291,760 + GFF2605 0.85 -0.2 291,760 + GFF2605 0.85 +0.3 291,760 + GFF2605 0.85 -0.8 291,761 - GFF2605 0.86 +0.9 292,277 - -0.5 292,277 - -0.5 292,527 - GFF2606 0.76 -0.2 292,527 - GFF2606 0.76 -0.5 292,552 + GFF2606 0.83 -0.2 292,552 + GFF2606 0.83 +0.3 292,646 + -0.3 292,646 + -0.9 292,646 + +0.2 292,646 + -1.1 292,647 - +0.0 292,728 + GFF2607 0.29 +0.3 292,728 + GFF2607 0.29 -1.5 292,777 + GFF2607 0.52 +1.1 292,777 + GFF2607 0.52 -0.4 292,777 + GFF2607 0.52 +0.9 292,777 + GFF2607 0.52 +0.1 292,778 - GFF2607 0.52 -0.6 292,778 - GFF2607 0.52 +0.6 292,778 - GFF2607 0.52 +0.2 292,779 + GFF2607 0.53 +0.8 292,779 + GFF2607 0.53 -0.2 292,779 + GFF2607 0.53 -0.4 292,779 + GFF2607 0.53 +0.8 292,780 - GFF2607 0.53 +1.2
Or see this region's nucleotide sequence