Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF222 and GFF223 are separated by 163 nucleotides GFF223 and GFF224 are separated by 10 nucleotides GFF224 and GFF225 are separated by 7 nucleotides
GFF222 - hypothetical protein, at 232,876 to 233,271
GFF222
GFF223 - hypothetical protein, at 233,435 to 233,974
GFF223
GFF224 - hypothetical protein, at 233,985 to 235,814
GFF224
GFF225 - hypothetical protein, at 235,822 to 237,033
GFF225
Position (kb) 233
234
235
236 Strain fitness (log2 ratio) -2
-1
0
1 at 233.387 kb on - strand at 233.510 kb on + strand, within GFF223 at 233.598 kb on - strand, within GFF223 at 233.624 kb on - strand, within GFF223 at 233.856 kb on - strand, within GFF223 at 233.871 kb on - strand, within GFF223 at 233.888 kb on + strand, within GFF223 at 233.889 kb on - strand, within GFF223 at 234.060 kb on + strand at 234.060 kb on + strand at 234.061 kb on - strand at 234.061 kb on - strand at 235.098 kb on - strand, within GFF224 at 235.482 kb on + strand, within GFF224 at 235.599 kb on + strand, within GFF224 at 235.599 kb on + strand, within GFF224 at 235.600 kb on - strand, within GFF224 at 235.675 kb on + strand at 235.823 kb on + strand at 235.823 kb on + strand at 235.846 kb on + strand at 235.846 kb on + strand at 235.847 kb on - strand at 235.944 kb on - strand, within GFF225 at 236.009 kb on + strand, within GFF225 at 236.009 kb on + strand, within GFF225 at 236.009 kb on + strand, within GFF225 at 236.010 kb on - strand, within GFF225 at 236.010 kb on - strand, within GFF225 at 236.010 kb on - strand, within GFF225 at 236.010 kb on - strand, within GFF225 at 236.058 kb on + strand, within GFF225 at 236.162 kb on + strand, within GFF225 at 236.162 kb on + strand, within GFF225 at 236.163 kb on - strand, within GFF225 at 236.163 kb on - strand, within GFF225 at 236.417 kb on + strand, within GFF225 at 236.798 kb on + strand, within GFF225 at 236.798 kb on + strand, within GFF225 at 236.798 kb on + strand, within GFF225 at 236.798 kb on + strand, within GFF225 at 236.799 kb on - strand, within GFF225 at 236.799 kb on - strand, within GFF225
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 233,387 - +0.1 233,510 + GFF223 0.14 -0.2 233,598 - GFF223 0.30 -0.7 233,624 - GFF223 0.35 -0.4 233,856 - GFF223 0.78 -0.0 233,871 - GFF223 0.81 -0.3 233,888 + GFF223 0.84 +0.0 233,889 - GFF223 0.84 +0.3 234,060 + +0.3 234,060 + +0.3 234,061 - -0.4 234,061 - -0.4 235,098 - GFF224 0.61 -1.9 235,482 + GFF224 0.82 +1.1 235,599 + GFF224 0.88 +0.8 235,599 + GFF224 0.88 +0.4 235,600 - GFF224 0.88 -0.1 235,675 + -0.4 235,823 + +0.8 235,823 + -0.2 235,846 + -0.1 235,846 + -0.2 235,847 - -0.4 235,944 - GFF225 0.10 +0.1 236,009 + GFF225 0.15 +0.0 236,009 + GFF225 0.15 -0.1 236,009 + GFF225 0.15 -1.4 236,010 - GFF225 0.16 +0.1 236,010 - GFF225 0.16 +0.8 236,010 - GFF225 0.16 -0.8 236,010 - GFF225 0.16 -1.0 236,058 + GFF225 0.19 +0.5 236,162 + GFF225 0.28 +0.6 236,162 + GFF225 0.28 +0.0 236,163 - GFF225 0.28 -0.9 236,163 - GFF225 0.28 +0.1 236,417 + GFF225 0.49 -0.3 236,798 + GFF225 0.81 -0.3 236,798 + GFF225 0.81 +1.0 236,798 + GFF225 0.81 -0.1 236,798 + GFF225 0.81 +0.5 236,799 - GFF225 0.81 -1.2 236,799 - GFF225 0.81 +0.3
Or see this region's nucleotide sequence