Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2152 and GFF2153 are separated by 403 nucleotides GFF2153 and GFF2154 are separated by 123 nucleotides
GFF2152 - hypothetical protein, at 841,708 to 842,748
GFF2152
GFF2153 - hypothetical protein, at 843,152 to 844,057
GFF2153
GFF2154 - Chaperone protein DnaK, at 844,181 to 845,431
GFF2154
Position (kb) 843
844
845 Strain fitness (log2 ratio) -1
0
1
2 at 842.318 kb on + strand, within GFF2152 at 842.318 kb on + strand, within GFF2152 at 842.318 kb on + strand, within GFF2152 at 842.319 kb on - strand, within GFF2152 at 842.319 kb on - strand, within GFF2152 at 842.319 kb on - strand, within GFF2152 at 842.319 kb on - strand, within GFF2152 at 842.436 kb on - strand, within GFF2152 at 842.436 kb on - strand, within GFF2152 at 842.725 kb on + strand at 842.726 kb on - strand at 842.790 kb on - strand at 843.041 kb on - strand at 843.077 kb on + strand at 843.078 kb on - strand at 843.152 kb on - strand at 843.369 kb on - strand, within GFF2153 at 843.383 kb on + strand, within GFF2153 at 843.384 kb on - strand, within GFF2153 at 843.384 kb on - strand, within GFF2153 at 843.384 kb on - strand, within GFF2153 at 843.641 kb on + strand, within GFF2153 at 843.915 kb on - strand, within GFF2153 at 843.915 kb on - strand, within GFF2153 at 843.963 kb on - strand, within GFF2153 at 843.963 kb on - strand, within GFF2153 at 844.008 kb on - strand at 844.136 kb on + strand at 844.136 kb on + strand at 844.136 kb on + strand at 844.137 kb on - strand at 844.141 kb on - strand at 844.163 kb on + strand at 844.279 kb on + strand at 844.298 kb on + strand at 844.349 kb on + strand, within GFF2154 at 844.350 kb on - strand, within GFF2154 at 844.350 kb on - strand, within GFF2154 at 844.350 kb on - strand, within GFF2154 at 844.717 kb on + strand, within GFF2154 at 844.717 kb on + strand, within GFF2154 at 844.928 kb on + strand, within GFF2154 at 844.929 kb on - strand, within GFF2154 at 844.967 kb on + strand, within GFF2154 at 844.968 kb on - strand, within GFF2154 at 844.968 kb on - strand, within GFF2154 at 844.968 kb on - strand, within GFF2154 at 844.968 kb on - strand, within GFF2154 at 844.968 kb on - strand, within GFF2154
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 842,318 + GFF2152 0.59 +0.1 842,318 + GFF2152 0.59 +0.7 842,318 + GFF2152 0.59 +0.3 842,319 - GFF2152 0.59 +0.1 842,319 - GFF2152 0.59 +0.2 842,319 - GFF2152 0.59 -0.3 842,319 - GFF2152 0.59 -0.7 842,436 - GFF2152 0.70 -0.5 842,436 - GFF2152 0.70 -0.8 842,725 + +0.5 842,726 - -0.5 842,790 - +0.7 843,041 - +1.0 843,077 + -1.0 843,078 - +0.4 843,152 - -0.3 843,369 - GFF2153 0.24 +0.1 843,383 + GFF2153 0.25 -0.5 843,384 - GFF2153 0.26 +0.4 843,384 - GFF2153 0.26 +0.2 843,384 - GFF2153 0.26 +0.4 843,641 + GFF2153 0.54 +0.5 843,915 - GFF2153 0.84 -0.8 843,915 - GFF2153 0.84 -0.2 843,963 - GFF2153 0.90 -0.4 843,963 - GFF2153 0.90 +0.1 844,008 - +0.2 844,136 + -0.3 844,136 + -0.4 844,136 + +1.8 844,137 - -0.3 844,141 - +0.1 844,163 + -0.6 844,279 + -0.7 844,298 + -0.1 844,349 + GFF2154 0.13 +0.1 844,350 - GFF2154 0.14 +0.3 844,350 - GFF2154 0.14 +0.3 844,350 - GFF2154 0.14 -0.4 844,717 + GFF2154 0.43 -0.0 844,717 + GFF2154 0.43 -0.7 844,928 + GFF2154 0.60 +0.1 844,929 - GFF2154 0.60 +0.4 844,967 + GFF2154 0.63 -0.6 844,968 - GFF2154 0.63 -0.0 844,968 - GFF2154 0.63 +0.0 844,968 - GFF2154 0.63 -0.2 844,968 - GFF2154 0.63 -0.9 844,968 - GFF2154 0.63 +0.1
Or see this region's nucleotide sequence