Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1496 and GFF1497 are separated by 65 nucleotides GFF1497 and GFF1498 are separated by 102 nucleotides GFF1498 and GFF1499 are separated by 168 nucleotides
GFF1496 - Histidinol-phosphate aminotransferase, at 134,842 to 135,975
GFF1496
GFF1497 - NADPH-dependent reductase BacG, at 136,041 to 136,820
GFF1497
GFF1498 - putative D-xylose utilization operon transcriptional repressor, at 136,923 to 137,636
GFF1498
GFF1499 - Taurine import ATP-binding protein TauB, at 137,805 to 138,719
GFF1499
Position (kb) 136
137
138 Strain fitness (log2 ratio) -1
0
1 at 135.943 kb on + strand at 135.944 kb on - strand at 135.947 kb on + strand at 135.948 kb on - strand at 136.103 kb on - strand at 136.177 kb on + strand, within GFF1497 at 136.178 kb on - strand, within GFF1497 at 136.375 kb on + strand, within GFF1497 at 136.375 kb on + strand, within GFF1497 at 136.375 kb on + strand, within GFF1497 at 136.376 kb on - strand, within GFF1497 at 136.376 kb on - strand, within GFF1497 at 136.450 kb on + strand, within GFF1497 at 136.450 kb on + strand, within GFF1497 at 136.453 kb on + strand, within GFF1497 at 136.453 kb on + strand, within GFF1497 at 136.454 kb on - strand, within GFF1497 at 136.489 kb on - strand, within GFF1497 at 136.489 kb on - strand, within GFF1497 at 136.636 kb on + strand, within GFF1497 at 136.636 kb on + strand, within GFF1497 at 136.650 kb on + strand, within GFF1497 at 137.161 kb on + strand, within GFF1498 at 137.194 kb on + strand, within GFF1498 at 137.194 kb on + strand, within GFF1498 at 137.195 kb on - strand, within GFF1498 at 137.195 kb on - strand, within GFF1498 at 137.722 kb on - strand at 137.722 kb on - strand at 137.722 kb on - strand at 137.755 kb on + strand at 137.755 kb on + strand at 137.755 kb on + strand at 137.756 kb on - strand at 137.756 kb on - strand at 137.756 kb on - strand at 137.756 kb on - strand at 137.756 kb on - strand at 137.756 kb on - strand at 137.765 kb on + strand at 137.765 kb on + strand at 137.766 kb on - strand at 137.846 kb on + strand at 137.994 kb on + strand, within GFF1499
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 135,943 + -0.3 135,944 - -0.1 135,947 + -0.3 135,948 - +1.5 136,103 - -0.3 136,177 + GFF1497 0.17 -0.3 136,178 - GFF1497 0.18 +0.6 136,375 + GFF1497 0.43 -0.2 136,375 + GFF1497 0.43 +0.2 136,375 + GFF1497 0.43 -1.1 136,376 - GFF1497 0.43 +0.9 136,376 - GFF1497 0.43 -0.2 136,450 + GFF1497 0.52 +0.7 136,450 + GFF1497 0.52 -1.0 136,453 + GFF1497 0.53 +0.1 136,453 + GFF1497 0.53 +0.4 136,454 - GFF1497 0.53 +0.2 136,489 - GFF1497 0.57 +1.5 136,489 - GFF1497 0.57 -0.2 136,636 + GFF1497 0.76 -0.3 136,636 + GFF1497 0.76 -0.6 136,650 + GFF1497 0.78 -0.4 137,161 + GFF1498 0.33 +0.3 137,194 + GFF1498 0.38 -0.2 137,194 + GFF1498 0.38 -0.8 137,195 - GFF1498 0.38 +0.7 137,195 - GFF1498 0.38 -0.4 137,722 - +0.1 137,722 - +0.1 137,722 - +0.3 137,755 + -0.1 137,755 + +0.3 137,755 + +0.6 137,756 - +0.5 137,756 - +0.5 137,756 - +0.6 137,756 - -0.8 137,756 - +0.3 137,756 - +0.7 137,765 + -0.0 137,765 + -0.4 137,766 - +0.1 137,846 + +0.8 137,994 + GFF1499 0.21 +0.2
Or see this region's nucleotide sequence