Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1458 and GFF1459 overlap by 4 nucleotides GFF1459 and GFF1460 are separated by 3 nucleotides
GFF1458 - 4-alpha-glucanotransferase, at 94,495 to 96,528
GFF1458
GFF1459 - Maltooligosyl trehalose synthase, at 96,525 to 99,050
GFF1459
GFF1460 - hypothetical protein, at 99,054 to 100,241
GFF1460
Position (kb) 96
97
98
99
100 Strain fitness (log2 ratio) -2
-1
0
1 at 95.884 kb on + strand, within GFF1458 at 95.884 kb on + strand, within GFF1458 at 96.313 kb on + strand, within GFF1458 at 96.314 kb on - strand, within GFF1458 at 96.552 kb on + strand at 96.553 kb on - strand at 96.553 kb on - strand at 96.553 kb on - strand at 96.553 kb on - strand at 96.639 kb on + strand at 96.639 kb on + strand at 96.639 kb on + strand at 96.639 kb on + strand at 96.640 kb on - strand at 96.640 kb on - strand at 96.684 kb on + strand at 96.684 kb on + strand at 96.684 kb on + strand at 96.685 kb on - strand at 96.685 kb on - strand at 96.899 kb on + strand, within GFF1459 at 96.900 kb on - strand, within GFF1459 at 96.946 kb on - strand, within GFF1459 at 97.014 kb on + strand, within GFF1459 at 97.014 kb on + strand, within GFF1459 at 97.015 kb on - strand, within GFF1459 at 97.015 kb on - strand, within GFF1459 at 97.156 kb on - strand, within GFF1459 at 97.776 kb on + strand, within GFF1459 at 97.776 kb on + strand, within GFF1459 at 97.776 kb on + strand, within GFF1459 at 97.995 kb on - strand, within GFF1459 at 97.995 kb on - strand, within GFF1459 at 98.005 kb on - strand, within GFF1459 at 98.005 kb on - strand, within GFF1459 at 98.011 kb on - strand, within GFF1459 at 98.342 kb on - strand, within GFF1459 at 98.592 kb on + strand, within GFF1459 at 98.592 kb on + strand, within GFF1459 at 98.775 kb on + strand, within GFF1459 at 98.775 kb on + strand, within GFF1459 at 98.775 kb on + strand, within GFF1459 at 98.775 kb on + strand, within GFF1459 at 98.775 kb on + strand, within GFF1459 at 98.776 kb on - strand, within GFF1459 at 98.776 kb on - strand, within GFF1459 at 98.923 kb on + strand at 98.969 kb on - strand at 99.055 kb on + strand at 99.056 kb on - strand at 99.056 kb on - strand at 99.227 kb on - strand, within GFF1460 at 99.583 kb on + strand, within GFF1460 at 99.740 kb on + strand, within GFF1460 at 99.740 kb on + strand, within GFF1460 at 99.740 kb on + strand, within GFF1460 at 99.740 kb on + strand, within GFF1460 at 99.871 kb on + strand, within GFF1460 at 99.871 kb on + strand, within GFF1460 at 99.871 kb on + strand, within GFF1460 at 99.871 kb on + strand, within GFF1460 at 99.871 kb on + strand, within GFF1460 at 99.872 kb on - strand, within GFF1460 at 99.872 kb on - strand, within GFF1460 at 99.872 kb on - strand, within GFF1460
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 95,884 + GFF1458 0.68 -1.2 95,884 + GFF1458 0.68 -0.2 96,313 + GFF1458 0.89 -0.1 96,314 - GFF1458 0.89 +0.5 96,552 + -0.8 96,553 - +0.2 96,553 - +1.3 96,553 - +1.2 96,553 - -0.0 96,639 + -0.9 96,639 + +0.3 96,639 + -0.6 96,639 + +0.3 96,640 - +0.9 96,640 - -0.1 96,684 + +1.2 96,684 + -0.4 96,684 + -0.7 96,685 - -1.3 96,685 - -0.1 96,899 + GFF1459 0.15 -0.5 96,900 - GFF1459 0.15 -0.9 96,946 - GFF1459 0.17 -0.5 97,014 + GFF1459 0.19 +0.5 97,014 + GFF1459 0.19 -0.9 97,015 - GFF1459 0.19 +0.5 97,015 - GFF1459 0.19 -0.5 97,156 - GFF1459 0.25 +0.2 97,776 + GFF1459 0.50 +0.9 97,776 + GFF1459 0.50 +0.4 97,776 + GFF1459 0.50 -2.2 97,995 - GFF1459 0.58 +1.5 97,995 - GFF1459 0.58 -0.1 98,005 - GFF1459 0.59 +1.7 98,005 - GFF1459 0.59 +0.3 98,011 - GFF1459 0.59 -0.6 98,342 - GFF1459 0.72 +0.1 98,592 + GFF1459 0.82 -0.6 98,592 + GFF1459 0.82 +0.4 98,775 + GFF1459 0.89 +0.2 98,775 + GFF1459 0.89 +0.9 98,775 + GFF1459 0.89 +0.8 98,775 + GFF1459 0.89 -0.5 98,775 + GFF1459 0.89 +1.5 98,776 - GFF1459 0.89 +0.5 98,776 - GFF1459 0.89 +0.2 98,923 + +0.4 98,969 - +0.1 99,055 + -0.1 99,056 - -0.1 99,056 - -0.3 99,227 - GFF1460 0.15 -0.2 99,583 + GFF1460 0.45 +0.6 99,740 + GFF1460 0.58 -0.6 99,740 + GFF1460 0.58 -1.6 99,740 + GFF1460 0.58 +0.3 99,740 + GFF1460 0.58 -2.5 99,871 + GFF1460 0.69 -0.3 99,871 + GFF1460 0.69 -1.9 99,871 + GFF1460 0.69 +0.1 99,871 + GFF1460 0.69 +0.1 99,871 + GFF1460 0.69 -0.2 99,872 - GFF1460 0.69 -0.1 99,872 - GFF1460 0.69 +0.2 99,872 - GFF1460 0.69 -0.4
Or see this region's nucleotide sequence