Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1439 and GFF1440 overlap by 4 nucleotides GFF1440 and GFF1441 overlap by 8 nucleotides
GFF1439 - Ribose import permease protein RbsC, at 61,798 to 62,772
GFF1439
GFF1440 - Ribose import permease protein RbsC, at 62,769 to 63,734
GFF1440
GFF1441 - Galactose/methyl galactoside import ATP-binding protein MglA, at 63,727 to 65,277
GFF1441
Position (kb) 62
63
64 Strain fitness (log2 ratio) -1
0
1 at 61.771 kb on - strand at 61.771 kb on - strand at 62.102 kb on + strand, within GFF1439 at 62.102 kb on + strand, within GFF1439 at 62.102 kb on + strand, within GFF1439 at 62.103 kb on - strand, within GFF1439 at 62.103 kb on - strand, within GFF1439 at 62.103 kb on - strand, within GFF1439 at 62.103 kb on - strand, within GFF1439 at 62.174 kb on + strand, within GFF1439 at 62.174 kb on + strand, within GFF1439 at 62.175 kb on - strand, within GFF1439 at 62.175 kb on - strand, within GFF1439 at 62.175 kb on - strand, within GFF1439 at 62.175 kb on - strand, within GFF1439 at 62.271 kb on - strand, within GFF1439 at 62.330 kb on + strand, within GFF1439 at 62.330 kb on + strand, within GFF1439 at 62.330 kb on + strand, within GFF1439 at 62.330 kb on + strand, within GFF1439 at 62.331 kb on - strand, within GFF1439 at 62.331 kb on - strand, within GFF1439 at 62.333 kb on + strand, within GFF1439 at 62.333 kb on + strand, within GFF1439 at 62.334 kb on - strand, within GFF1439 at 62.334 kb on - strand, within GFF1439 at 62.336 kb on + strand, within GFF1439 at 62.336 kb on + strand, within GFF1439 at 62.336 kb on + strand, within GFF1439 at 62.336 kb on + strand, within GFF1439 at 62.337 kb on - strand, within GFF1439 at 62.337 kb on - strand, within GFF1439 at 62.369 kb on + strand, within GFF1439 at 62.369 kb on + strand, within GFF1439 at 62.369 kb on + strand, within GFF1439 at 62.369 kb on + strand, within GFF1439 at 62.370 kb on - strand, within GFF1439 at 62.370 kb on - strand, within GFF1439 at 62.370 kb on - strand, within GFF1439 at 62.370 kb on - strand, within GFF1439 at 62.523 kb on + strand, within GFF1439 at 62.700 kb on - strand at 62.700 kb on - strand at 62.700 kb on - strand at 63.073 kb on + strand, within GFF1440 at 63.073 kb on + strand, within GFF1440 at 63.073 kb on + strand, within GFF1440 at 63.074 kb on - strand, within GFF1440 at 63.151 kb on + strand, within GFF1440 at 63.151 kb on + strand, within GFF1440 at 63.151 kb on + strand, within GFF1440 at 63.151 kb on + strand, within GFF1440 at 63.151 kb on + strand, within GFF1440 at 63.152 kb on - strand, within GFF1440 at 63.152 kb on - strand, within GFF1440 at 63.172 kb on + strand, within GFF1440 at 63.173 kb on - strand, within GFF1440 at 63.196 kb on + strand, within GFF1440 at 63.196 kb on + strand, within GFF1440 at 63.197 kb on - strand, within GFF1440 at 63.197 kb on - strand, within GFF1440 at 63.197 kb on - strand, within GFF1440 at 63.197 kb on - strand, within GFF1440 at 63.251 kb on - strand, within GFF1440 at 63.556 kb on - strand, within GFF1440 at 63.556 kb on - strand, within GFF1440 at 63.556 kb on - strand, within GFF1440 at 63.556 kb on - strand, within GFF1440 at 63.819 kb on - strand at 64.478 kb on + strand, within GFF1441
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 61,771 - +0.5 61,771 - -0.1 62,102 + GFF1439 0.31 +0.5 62,102 + GFF1439 0.31 -0.6 62,102 + GFF1439 0.31 -0.1 62,103 - GFF1439 0.31 +0.5 62,103 - GFF1439 0.31 -0.3 62,103 - GFF1439 0.31 -1.0 62,103 - GFF1439 0.31 +1.5 62,174 + GFF1439 0.39 +0.3 62,174 + GFF1439 0.39 +0.3 62,175 - GFF1439 0.39 -0.3 62,175 - GFF1439 0.39 +0.0 62,175 - GFF1439 0.39 -0.1 62,175 - GFF1439 0.39 +0.6 62,271 - GFF1439 0.49 -0.5 62,330 + GFF1439 0.55 +0.1 62,330 + GFF1439 0.55 +0.1 62,330 + GFF1439 0.55 +0.4 62,330 + GFF1439 0.55 +0.5 62,331 - GFF1439 0.55 +0.3 62,331 - GFF1439 0.55 +0.3 62,333 + GFF1439 0.55 -0.1 62,333 + GFF1439 0.55 -0.5 62,334 - GFF1439 0.55 -0.5 62,334 - GFF1439 0.55 -0.0 62,336 + GFF1439 0.55 +0.0 62,336 + GFF1439 0.55 +0.2 62,336 + GFF1439 0.55 -0.4 62,336 + GFF1439 0.55 -0.6 62,337 - GFF1439 0.55 +0.2 62,337 - GFF1439 0.55 -0.1 62,369 + GFF1439 0.59 +0.0 62,369 + GFF1439 0.59 -0.9 62,369 + GFF1439 0.59 -0.5 62,369 + GFF1439 0.59 +0.2 62,370 - GFF1439 0.59 -0.0 62,370 - GFF1439 0.59 -0.6 62,370 - GFF1439 0.59 +0.1 62,370 - GFF1439 0.59 -0.4 62,523 + GFF1439 0.74 +0.2 62,700 - +0.6 62,700 - +0.1 62,700 - +0.5 63,073 + GFF1440 0.31 +0.6 63,073 + GFF1440 0.31 +1.4 63,073 + GFF1440 0.31 -0.1 63,074 - GFF1440 0.32 +0.3 63,151 + GFF1440 0.40 +0.2 63,151 + GFF1440 0.40 +0.1 63,151 + GFF1440 0.40 -0.1 63,151 + GFF1440 0.40 -0.8 63,151 + GFF1440 0.40 -0.1 63,152 - GFF1440 0.40 +0.1 63,152 - GFF1440 0.40 -0.2 63,172 + GFF1440 0.42 +0.5 63,173 - GFF1440 0.42 -0.1 63,196 + GFF1440 0.44 +0.2 63,196 + GFF1440 0.44 +0.7 63,197 - GFF1440 0.44 -0.1 63,197 - GFF1440 0.44 -0.7 63,197 - GFF1440 0.44 -0.7 63,197 - GFF1440 0.44 -0.7 63,251 - GFF1440 0.50 +0.3 63,556 - GFF1440 0.81 +0.2 63,556 - GFF1440 0.81 -0.6 63,556 - GFF1440 0.81 +0.3 63,556 - GFF1440 0.81 -1.1 63,819 - +0.7 64,478 + GFF1441 0.48 -0.7
Or see this region's nucleotide sequence