Experiment: LB_noSalt with Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS37500 and QEN71_RS37505 are separated by 132 nucleotides QEN71_RS37505 and QEN71_RS37510 are separated by 166 nucleotides QEN71_RS37510 and QEN71_RS37515 overlap by 8 nucleotides
QEN71_RS37500: QEN71_RS37500 - YihY/virulence factor BrkB family protein, at 1,788,155 to 1,789,018
_RS37500
QEN71_RS37505: QEN71_RS37505 - hypothetical protein, at 1,789,151 to 1,789,321
_RS37505
QEN71_RS37510: QEN71_RS37510 - FdhF/YdeP family oxidoreductase, at 1,789,488 to 1,791,845
_RS37510
QEN71_RS37515: QEN71_RS37515 - cytochrome ubiquinol oxidase subunit I, at 1,791,838 to 1,793,241
_RS37515
Position (kb)
1789
1790
1791
1792 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1788.575 kb on + strand, within QEN71_RS37500 at 1788.934 kb on - strand at 1789.392 kb on + strand at 1789.392 kb on + strand at 1789.396 kb on + strand at 1789.396 kb on + strand at 1789.515 kb on + strand at 1789.515 kb on + strand at 1789.515 kb on + strand at 1789.516 kb on - strand at 1789.516 kb on - strand at 1789.516 kb on - strand at 1789.516 kb on - strand at 1789.794 kb on + strand, within QEN71_RS37510 at 1789.836 kb on + strand, within QEN71_RS37510 at 1789.845 kb on - strand, within QEN71_RS37510 at 1790.556 kb on + strand, within QEN71_RS37510 at 1790.556 kb on + strand, within QEN71_RS37510 at 1790.586 kb on + strand, within QEN71_RS37510 at 1791.225 kb on + strand, within QEN71_RS37510 at 1791.277 kb on - strand, within QEN71_RS37510 at 1791.454 kb on - strand, within QEN71_RS37510 at 1791.637 kb on - strand at 1791.667 kb on - strand at 1791.669 kb on + strand at 1791.699 kb on + strand at 1791.699 kb on + strand at 1791.982 kb on + strand, within QEN71_RS37515 at 1791.982 kb on + strand, within QEN71_RS37515 at 1791.983 kb on - strand, within QEN71_RS37515 at 1792.099 kb on + strand, within QEN71_RS37515 at 1792.447 kb on + strand, within QEN71_RS37515 at 1792.808 kb on - strand, within QEN71_RS37515
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Chloride 200 mM remove 1,788,575 + QEN71_RS37500 0.49 +0.4 1,788,934 - +0.3 1,789,392 + +0.0 1,789,392 + -1.7 1,789,396 + +1.2 1,789,396 + -0.2 1,789,515 + +1.3 1,789,515 + -1.6 1,789,515 + -2.4 1,789,516 - +1.0 1,789,516 - +0.1 1,789,516 - -0.8 1,789,516 - +0.3 1,789,794 + QEN71_RS37510 0.13 -1.5 1,789,836 + QEN71_RS37510 0.15 -0.6 1,789,845 - QEN71_RS37510 0.15 -0.4 1,790,556 + QEN71_RS37510 0.45 -0.0 1,790,556 + QEN71_RS37510 0.45 -1.0 1,790,586 + QEN71_RS37510 0.47 +0.6 1,791,225 + QEN71_RS37510 0.74 +1.4 1,791,277 - QEN71_RS37510 0.76 -0.6 1,791,454 - QEN71_RS37510 0.83 -2.9 1,791,637 - +1.2 1,791,667 - +0.5 1,791,669 + -0.5 1,791,699 + +0.0 1,791,699 + -0.2 1,791,982 + QEN71_RS37515 0.10 -0.2 1,791,982 + QEN71_RS37515 0.10 -1.0 1,791,983 - QEN71_RS37515 0.10 -2.1 1,792,099 + QEN71_RS37515 0.19 +0.2 1,792,447 + QEN71_RS37515 0.43 -0.0 1,792,808 - QEN71_RS37515 0.69 -0.4
Or see this region's nucleotide sequence