Experiment: LB_noSalt with Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS36655 and QEN71_RS36660 are separated by 141 nucleotides QEN71_RS36660 and QEN71_RS36665 are separated by 64 nucleotides
QEN71_RS36655: QEN71_RS36655 - cysteine synthase A, at 1,606,934 to 1,607,908
_RS36655
QEN71_RS36660: QEN71_RS36660 - DeoR/GlpR family DNA-binding transcription regulator, at 1,608,050 to 1,608,820
_RS36660
QEN71_RS36665: QEN71_RS36665 - 4-hydroxythreonine-4-phosphate dehydrogenase PdxA, at 1,608,885 to 1,609,883
_RS36665
Position (kb)
1608
1609 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1607.100 kb on + strand, within QEN71_RS36655 at 1607.100 kb on + strand, within QEN71_RS36655 at 1607.100 kb on + strand, within QEN71_RS36655 at 1607.100 kb on + strand, within QEN71_RS36655 at 1607.100 kb on + strand, within QEN71_RS36655 at 1607.100 kb on + strand, within QEN71_RS36655 at 1607.100 kb on + strand, within QEN71_RS36655 at 1607.100 kb on + strand, within QEN71_RS36655 at 1607.100 kb on + strand, within QEN71_RS36655 at 1607.101 kb on - strand, within QEN71_RS36655 at 1607.101 kb on - strand, within QEN71_RS36655 at 1607.101 kb on - strand, within QEN71_RS36655 at 1607.127 kb on + strand, within QEN71_RS36655 at 1607.128 kb on - strand, within QEN71_RS36655 at 1607.128 kb on - strand, within QEN71_RS36655 at 1607.268 kb on + strand, within QEN71_RS36655 at 1607.268 kb on + strand, within QEN71_RS36655 at 1607.268 kb on + strand, within QEN71_RS36655 at 1607.269 kb on - strand, within QEN71_RS36655 at 1607.269 kb on - strand, within QEN71_RS36655 at 1607.269 kb on - strand, within QEN71_RS36655 at 1607.272 kb on + strand, within QEN71_RS36655 at 1607.272 kb on + strand, within QEN71_RS36655 at 1607.272 kb on + strand, within QEN71_RS36655 at 1607.272 kb on + strand, within QEN71_RS36655 at 1607.272 kb on + strand, within QEN71_RS36655 at 1607.272 kb on + strand, within QEN71_RS36655 at 1607.272 kb on + strand, within QEN71_RS36655 at 1607.272 kb on + strand, within QEN71_RS36655 at 1607.272 kb on + strand, within QEN71_RS36655 at 1607.272 kb on + strand, within QEN71_RS36655 at 1607.273 kb on - strand, within QEN71_RS36655 at 1607.273 kb on - strand, within QEN71_RS36655 at 1607.273 kb on - strand, within QEN71_RS36655 at 1607.273 kb on - strand, within QEN71_RS36655 at 1607.273 kb on - strand, within QEN71_RS36655 at 1607.273 kb on - strand, within QEN71_RS36655 at 1607.274 kb on + strand, within QEN71_RS36655 at 1607.274 kb on + strand, within QEN71_RS36655 at 1607.275 kb on - strand, within QEN71_RS36655 at 1607.275 kb on - strand, within QEN71_RS36655 at 1607.275 kb on - strand, within QEN71_RS36655 at 1607.407 kb on + strand, within QEN71_RS36655 at 1607.439 kb on + strand, within QEN71_RS36655 at 1607.439 kb on + strand, within QEN71_RS36655 at 1607.440 kb on - strand, within QEN71_RS36655 at 1607.440 kb on - strand, within QEN71_RS36655 at 1607.440 kb on - strand, within QEN71_RS36655 at 1607.440 kb on - strand, within QEN71_RS36655 at 1607.529 kb on + strand, within QEN71_RS36655 at 1607.529 kb on + strand, within QEN71_RS36655 at 1607.529 kb on + strand, within QEN71_RS36655 at 1607.530 kb on - strand, within QEN71_RS36655 at 1607.530 kb on - strand, within QEN71_RS36655 at 1607.530 kb on - strand, within QEN71_RS36655 at 1607.547 kb on + strand, within QEN71_RS36655 at 1607.547 kb on + strand, within QEN71_RS36655 at 1607.548 kb on - strand, within QEN71_RS36655 at 1607.548 kb on - strand, within QEN71_RS36655 at 1607.664 kb on - strand, within QEN71_RS36655 at 1607.664 kb on - strand, within QEN71_RS36655 at 1607.664 kb on - strand, within QEN71_RS36655 at 1607.664 kb on - strand, within QEN71_RS36655 at 1607.686 kb on + strand, within QEN71_RS36655 at 1607.686 kb on + strand, within QEN71_RS36655 at 1607.687 kb on - strand, within QEN71_RS36655 at 1607.699 kb on - strand, within QEN71_RS36655 at 1607.760 kb on + strand, within QEN71_RS36655 at 1607.760 kb on + strand, within QEN71_RS36655 at 1607.760 kb on + strand, within QEN71_RS36655 at 1607.760 kb on + strand, within QEN71_RS36655 at 1607.761 kb on - strand, within QEN71_RS36655 at 1607.761 kb on - strand, within QEN71_RS36655 at 1607.761 kb on - strand, within QEN71_RS36655 at 1607.761 kb on - strand, within QEN71_RS36655 at 1607.900 kb on + strand at 1607.900 kb on + strand at 1607.963 kb on + strand at 1607.963 kb on + strand at 1608.204 kb on - strand, within QEN71_RS36660 at 1608.452 kb on - strand, within QEN71_RS36660 at 1608.452 kb on - strand, within QEN71_RS36660 at 1608.530 kb on + strand, within QEN71_RS36660 at 1608.853 kb on + strand at 1608.853 kb on + strand at 1608.854 kb on - strand at 1608.865 kb on + strand at 1608.866 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Chloride 200 mM remove 1,607,100 + QEN71_RS36655 0.17 +0.1 1,607,100 + QEN71_RS36655 0.17 -0.6 1,607,100 + QEN71_RS36655 0.17 -1.0 1,607,100 + QEN71_RS36655 0.17 -2.2 1,607,100 + QEN71_RS36655 0.17 +0.4 1,607,100 + QEN71_RS36655 0.17 +0.0 1,607,100 + QEN71_RS36655 0.17 -0.2 1,607,100 + QEN71_RS36655 0.17 +0.4 1,607,100 + QEN71_RS36655 0.17 -1.3 1,607,101 - QEN71_RS36655 0.17 +0.1 1,607,101 - QEN71_RS36655 0.17 +0.1 1,607,101 - QEN71_RS36655 0.17 +1.6 1,607,127 + QEN71_RS36655 0.20 -0.2 1,607,128 - QEN71_RS36655 0.20 -1.4 1,607,128 - QEN71_RS36655 0.20 -1.4 1,607,268 + QEN71_RS36655 0.34 +0.3 1,607,268 + QEN71_RS36655 0.34 +0.1 1,607,268 + QEN71_RS36655 0.34 +0.0 1,607,269 - QEN71_RS36655 0.34 +0.4 1,607,269 - QEN71_RS36655 0.34 -0.4 1,607,269 - QEN71_RS36655 0.34 +0.1 1,607,272 + QEN71_RS36655 0.35 +0.7 1,607,272 + QEN71_RS36655 0.35 +1.1 1,607,272 + QEN71_RS36655 0.35 +0.3 1,607,272 + QEN71_RS36655 0.35 +0.7 1,607,272 + QEN71_RS36655 0.35 +0.7 1,607,272 + QEN71_RS36655 0.35 +0.6 1,607,272 + QEN71_RS36655 0.35 +0.7 1,607,272 + QEN71_RS36655 0.35 -0.2 1,607,272 + QEN71_RS36655 0.35 -1.4 1,607,272 + QEN71_RS36655 0.35 -1.1 1,607,273 - QEN71_RS36655 0.35 -0.9 1,607,273 - QEN71_RS36655 0.35 +1.2 1,607,273 - QEN71_RS36655 0.35 -1.3 1,607,273 - QEN71_RS36655 0.35 -0.6 1,607,273 - QEN71_RS36655 0.35 -0.6 1,607,273 - QEN71_RS36655 0.35 -1.4 1,607,274 + QEN71_RS36655 0.35 -0.1 1,607,274 + QEN71_RS36655 0.35 +0.1 1,607,275 - QEN71_RS36655 0.35 +1.2 1,607,275 - QEN71_RS36655 0.35 -0.4 1,607,275 - QEN71_RS36655 0.35 -1.7 1,607,407 + QEN71_RS36655 0.49 +1.5 1,607,439 + QEN71_RS36655 0.52 -1.0 1,607,439 + QEN71_RS36655 0.52 +1.2 1,607,440 - QEN71_RS36655 0.52 -1.2 1,607,440 - QEN71_RS36655 0.52 -1.2 1,607,440 - QEN71_RS36655 0.52 -0.3 1,607,440 - QEN71_RS36655 0.52 -0.4 1,607,529 + QEN71_RS36655 0.61 +0.2 1,607,529 + QEN71_RS36655 0.61 +0.3 1,607,529 + QEN71_RS36655 0.61 -2.0 1,607,530 - QEN71_RS36655 0.61 -0.6 1,607,530 - QEN71_RS36655 0.61 -0.7 1,607,530 - QEN71_RS36655 0.61 -0.3 1,607,547 + QEN71_RS36655 0.63 -0.1 1,607,547 + QEN71_RS36655 0.63 -0.6 1,607,548 - QEN71_RS36655 0.63 -1.3 1,607,548 - QEN71_RS36655 0.63 +0.3 1,607,664 - QEN71_RS36655 0.75 +0.1 1,607,664 - QEN71_RS36655 0.75 -0.4 1,607,664 - QEN71_RS36655 0.75 +0.0 1,607,664 - QEN71_RS36655 0.75 -1.3 1,607,686 + QEN71_RS36655 0.77 -0.4 1,607,686 + QEN71_RS36655 0.77 -1.0 1,607,687 - QEN71_RS36655 0.77 -1.0 1,607,699 - QEN71_RS36655 0.78 +0.1 1,607,760 + QEN71_RS36655 0.85 -0.1 1,607,760 + QEN71_RS36655 0.85 -0.1 1,607,760 + QEN71_RS36655 0.85 -0.1 1,607,760 + QEN71_RS36655 0.85 +0.3 1,607,761 - QEN71_RS36655 0.85 -1.2 1,607,761 - QEN71_RS36655 0.85 -0.4 1,607,761 - QEN71_RS36655 0.85 -0.5 1,607,761 - QEN71_RS36655 0.85 +0.1 1,607,900 + -1.6 1,607,900 + +0.0 1,607,963 + +0.8 1,607,963 + -0.0 1,608,204 - QEN71_RS36660 0.20 +1.0 1,608,452 - QEN71_RS36660 0.52 +1.8 1,608,452 - QEN71_RS36660 0.52 +0.9 1,608,530 + QEN71_RS36660 0.62 +0.1 1,608,853 + +0.1 1,608,853 + -0.2 1,608,854 - -0.1 1,608,865 + -0.3 1,608,866 - +0.1
Or see this region's nucleotide sequence