Experiment: LB_noSalt with Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS24790 and QEN71_RS24795 are separated by 306 nucleotides QEN71_RS24795 and QEN71_RS24800 are separated by 78 nucleotides QEN71_RS24800 and QEN71_RS24805 are separated by 441 nucleotides
QEN71_RS24790: QEN71_RS24790 - sigma-54 dependent transcriptional regulator, at 5,513,292 to 5,514,695
_RS24790
QEN71_RS24795: QEN71_RS24795 - hypothetical protein, at 5,515,002 to 5,515,253
_RS24795
QEN71_RS24800: QEN71_RS24800 - DUF883 family protein, at 5,515,332 to 5,515,649
_RS24800
QEN71_RS24805: QEN71_RS24805 - sigma-54 dependent transcriptional regulator, at 5,516,091 to 5,517,146
_RS24805
Position (kb) 5515
5516 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5514.013 kb on + strand, within QEN71_RS24790 at 5514.659 kb on + strand at 5514.659 kb on + strand at 5514.659 kb on + strand at 5514.684 kb on + strand at 5514.684 kb on + strand at 5514.684 kb on + strand at 5514.684 kb on + strand at 5514.684 kb on + strand at 5514.684 kb on + strand at 5514.684 kb on + strand at 5514.684 kb on + strand at 5514.684 kb on + strand at 5514.684 kb on + strand at 5514.684 kb on + strand at 5514.684 kb on + strand at 5514.684 kb on + strand at 5514.684 kb on + strand at 5514.684 kb on + strand at 5514.684 kb on + strand at 5514.684 kb on + strand at 5514.684 kb on + strand at 5514.684 kb on + strand at 5514.684 kb on + strand at 5514.684 kb on + strand at 5514.684 kb on + strand at 5514.685 kb on - strand at 5514.685 kb on - strand at 5514.685 kb on - strand at 5514.685 kb on - strand at 5514.685 kb on - strand at 5514.685 kb on - strand at 5514.685 kb on - strand at 5514.685 kb on - strand at 5514.685 kb on - strand at 5514.685 kb on - strand at 5514.685 kb on - strand at 5514.685 kb on - strand at 5514.685 kb on - strand at 5514.685 kb on - strand at 5514.685 kb on - strand at 5514.685 kb on - strand at 5514.685 kb on - strand at 5514.685 kb on - strand at 5514.685 kb on - strand at 5514.685 kb on - strand at 5514.685 kb on - strand at 5514.713 kb on + strand at 5514.713 kb on + strand at 5514.713 kb on + strand at 5514.713 kb on + strand at 5514.713 kb on + strand at 5514.713 kb on + strand at 5514.713 kb on + strand at 5514.714 kb on - strand at 5514.714 kb on - strand at 5514.714 kb on - strand at 5514.714 kb on - strand at 5514.714 kb on - strand at 5514.714 kb on - strand at 5514.714 kb on - strand at 5514.714 kb on - strand at 5514.714 kb on - strand at 5514.714 kb on - strand at 5514.723 kb on + strand at 5514.723 kb on + strand at 5514.724 kb on - strand at 5514.730 kb on + strand at 5514.730 kb on + strand at 5514.730 kb on + strand at 5514.730 kb on + strand at 5514.731 kb on - strand at 5514.731 kb on - strand at 5514.799 kb on + strand at 5514.799 kb on + strand at 5514.799 kb on + strand at 5514.799 kb on + strand at 5514.799 kb on + strand at 5514.799 kb on + strand at 5514.799 kb on + strand at 5514.799 kb on + strand at 5514.799 kb on + strand at 5514.799 kb on + strand at 5514.799 kb on + strand at 5514.799 kb on + strand at 5514.799 kb on + strand at 5514.799 kb on + strand at 5514.799 kb on + strand at 5514.800 kb on - strand at 5514.800 kb on - strand at 5514.800 kb on - strand at 5514.800 kb on - strand at 5514.800 kb on - strand at 5514.800 kb on - strand at 5514.800 kb on - strand at 5514.800 kb on - strand at 5514.800 kb on - strand at 5514.800 kb on - strand at 5514.800 kb on - strand at 5514.800 kb on - strand at 5514.800 kb on - strand at 5514.800 kb on - strand at 5514.800 kb on - strand at 5514.800 kb on - strand at 5514.800 kb on - strand at 5514.800 kb on - strand at 5514.800 kb on - strand at 5514.800 kb on - strand at 5514.800 kb on - strand at 5514.800 kb on - strand at 5514.888 kb on - strand at 5514.897 kb on + strand at 5514.897 kb on + strand at 5514.897 kb on + strand at 5514.897 kb on + strand at 5514.897 kb on + strand at 5514.897 kb on + strand at 5514.898 kb on - strand at 5514.898 kb on - strand at 5514.898 kb on - strand at 5514.898 kb on - strand at 5514.919 kb on + strand at 5514.919 kb on + strand at 5514.919 kb on + strand at 5514.919 kb on + strand at 5514.919 kb on + strand at 5514.919 kb on + strand at 5514.919 kb on + strand at 5514.920 kb on - strand at 5514.920 kb on - strand at 5514.920 kb on - strand at 5514.920 kb on - strand at 5514.920 kb on - strand at 5514.920 kb on - strand at 5514.920 kb on - strand at 5514.921 kb on + strand at 5514.921 kb on + strand at 5514.921 kb on + strand at 5514.922 kb on - strand at 5514.922 kb on - strand at 5514.922 kb on - strand at 5514.922 kb on - strand at 5514.922 kb on - strand at 5514.922 kb on - strand at 5514.922 kb on - strand at 5514.922 kb on - strand at 5514.922 kb on - strand at 5514.922 kb on - strand at 5515.031 kb on + strand, within QEN71_RS24795 at 5515.031 kb on + strand, within QEN71_RS24795 at 5515.032 kb on - strand, within QEN71_RS24795 at 5515.032 kb on - strand, within QEN71_RS24795 at 5515.032 kb on - strand, within QEN71_RS24795 at 5515.032 kb on - strand, within QEN71_RS24795 at 5515.032 kb on - strand, within QEN71_RS24795 at 5515.230 kb on + strand at 5515.230 kb on + strand at 5515.230 kb on + strand at 5515.230 kb on + strand at 5515.230 kb on + strand at 5515.231 kb on - strand at 5515.231 kb on - strand at 5515.411 kb on + strand, within QEN71_RS24800 at 5515.411 kb on + strand, within QEN71_RS24800 at 5515.411 kb on + strand, within QEN71_RS24800 at 5515.411 kb on + strand, within QEN71_RS24800 at 5515.411 kb on + strand, within QEN71_RS24800 at 5515.411 kb on + strand, within QEN71_RS24800 at 5515.411 kb on + strand, within QEN71_RS24800 at 5515.412 kb on - strand, within QEN71_RS24800 at 5515.412 kb on - strand, within QEN71_RS24800 at 5515.412 kb on - strand, within QEN71_RS24800 at 5515.412 kb on - strand, within QEN71_RS24800 at 5515.412 kb on - strand, within QEN71_RS24800 at 5515.412 kb on - strand, within QEN71_RS24800 at 5515.412 kb on - strand, within QEN71_RS24800 at 5515.412 kb on - strand, within QEN71_RS24800 at 5515.731 kb on + strand at 5515.731 kb on + strand at 5515.732 kb on - strand at 5515.732 kb on - strand at 5515.732 kb on - strand at 5515.771 kb on + strand at 5515.771 kb on + strand at 5515.771 kb on + strand at 5515.771 kb on + strand at 5515.771 kb on + strand at 5515.772 kb on - strand at 5515.772 kb on - strand at 5515.807 kb on + strand at 5515.808 kb on - strand at 5515.808 kb on - strand at 5515.867 kb on + strand at 5515.927 kb on - strand at 5515.927 kb on - strand at 5515.980 kb on + strand at 5515.980 kb on + strand at 5515.999 kb on + strand at 5515.999 kb on + strand at 5515.999 kb on + strand at 5515.999 kb on + strand at 5516.000 kb on - strand at 5516.000 kb on - strand at 5516.000 kb on - strand at 5516.000 kb on - strand at 5516.012 kb on + strand at 5516.012 kb on + strand at 5516.012 kb on + strand at 5516.012 kb on + strand at 5516.012 kb on + strand at 5516.012 kb on + strand at 5516.012 kb on + strand at 5516.012 kb on + strand at 5516.012 kb on + strand at 5516.012 kb on + strand at 5516.012 kb on + strand at 5516.013 kb on - strand at 5516.013 kb on - strand at 5516.013 kb on - strand at 5516.013 kb on - strand at 5516.013 kb on - strand at 5516.013 kb on - strand at 5516.013 kb on - strand at 5516.013 kb on - strand at 5516.013 kb on - strand at 5516.013 kb on - strand at 5516.013 kb on - strand at 5516.013 kb on - strand at 5516.013 kb on - strand at 5516.036 kb on - strand at 5516.090 kb on + strand at 5516.090 kb on + strand at 5516.090 kb on + strand at 5516.090 kb on + strand at 5516.091 kb on - strand at 5516.091 kb on - strand at 5516.091 kb on - strand at 5516.091 kb on - strand at 5516.091 kb on - strand at 5516.091 kb on - strand at 5516.091 kb on - strand at 5516.193 kb on + strand at 5516.194 kb on - strand at 5516.194 kb on - strand at 5516.235 kb on + strand, within QEN71_RS24805 at 5516.235 kb on + strand, within QEN71_RS24805 at 5516.235 kb on + strand, within QEN71_RS24805 at 5516.235 kb on + strand, within QEN71_RS24805 at 5516.236 kb on - strand, within QEN71_RS24805 at 5516.236 kb on - strand, within QEN71_RS24805 at 5516.236 kb on - strand, within QEN71_RS24805 at 5516.236 kb on - strand, within QEN71_RS24805 at 5516.236 kb on - strand, within QEN71_RS24805 at 5516.236 kb on - strand, within QEN71_RS24805 at 5516.236 kb on - strand, within QEN71_RS24805 at 5516.236 kb on - strand, within QEN71_RS24805
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Chloride 200 mM remove 5,514,013 + QEN71_RS24790 0.51 -0.4 5,514,659 + -0.7 5,514,659 + -0.3 5,514,659 + +1.9 5,514,684 + +0.8 5,514,684 + -0.2 5,514,684 + -0.2 5,514,684 + -0.1 5,514,684 + -1.3 5,514,684 + +0.9 5,514,684 + -2.2 5,514,684 + +0.5 5,514,684 + +0.1 5,514,684 + -0.9 5,514,684 + +0.7 5,514,684 + +0.3 5,514,684 + +1.0 5,514,684 + +1.7 5,514,684 + +0.5 5,514,684 + +0.2 5,514,684 + -0.6 5,514,684 + +0.7 5,514,684 + +0.0 5,514,684 + -0.5 5,514,684 + -0.6 5,514,684 + +0.1 5,514,685 - +0.9 5,514,685 - +0.0 5,514,685 - +0.9 5,514,685 - +0.7 5,514,685 - +0.4 5,514,685 - -0.1 5,514,685 - -0.3 5,514,685 - +0.7 5,514,685 - +1.7 5,514,685 - +0.6 5,514,685 - +1.6 5,514,685 - -1.3 5,514,685 - +0.9 5,514,685 - +0.5 5,514,685 - +0.3 5,514,685 - +0.2 5,514,685 - +0.2 5,514,685 - +0.3 5,514,685 - +1.8 5,514,685 - +2.5 5,514,685 - -0.1 5,514,713 + -0.4 5,514,713 + +0.5 5,514,713 + +0.6 5,514,713 + +1.5 5,514,713 + +0.5 5,514,713 + +0.5 5,514,713 + +0.5 5,514,714 - -0.7 5,514,714 - -0.4 5,514,714 - -0.5 5,514,714 - -2.3 5,514,714 - +0.7 5,514,714 - -0.6 5,514,714 - +0.3 5,514,714 - +0.0 5,514,714 - +0.5 5,514,714 - -0.3 5,514,723 + -1.2 5,514,723 + +1.1 5,514,724 - -0.3 5,514,730 + +1.1 5,514,730 + -0.5 5,514,730 + +0.5 5,514,730 + +0.0 5,514,731 - -0.5 5,514,731 - -0.3 5,514,799 + +0.6 5,514,799 + +0.3 5,514,799 + -0.3 5,514,799 + -1.4 5,514,799 + -0.1 5,514,799 + +0.7 5,514,799 + -0.7 5,514,799 + -0.4 5,514,799 + +1.3 5,514,799 + -0.3 5,514,799 + -0.8 5,514,799 + -0.3 5,514,799 + -0.5 5,514,799 + +0.3 5,514,799 + -0.8 5,514,800 - -0.6 5,514,800 - +2.3 5,514,800 - -0.4 5,514,800 - +0.1 5,514,800 - +1.5 5,514,800 - -0.0 5,514,800 - +0.1 5,514,800 - +0.0 5,514,800 - +0.5 5,514,800 - -0.3 5,514,800 - -0.6 5,514,800 - +0.3 5,514,800 - -1.1 5,514,800 - -0.0 5,514,800 - -0.7 5,514,800 - +0.4 5,514,800 - +1.4 5,514,800 - -0.9 5,514,800 - -0.5 5,514,800 - +0.9 5,514,800 - -0.4 5,514,800 - +0.4 5,514,888 - +0.0 5,514,897 + -0.0 5,514,897 + -0.4 5,514,897 + +1.2 5,514,897 + +0.6 5,514,897 + +0.6 5,514,897 + -0.1 5,514,898 - +0.5 5,514,898 - +1.2 5,514,898 - -1.2 5,514,898 - +0.3 5,514,919 + +0.1 5,514,919 + +2.1 5,514,919 + +0.0 5,514,919 + +0.6 5,514,919 + +0.6 5,514,919 + -0.3 5,514,919 + +0.1 5,514,920 - -0.3 5,514,920 - +0.0 5,514,920 - -0.4 5,514,920 - -0.2 5,514,920 - -0.7 5,514,920 - +0.3 5,514,920 - -0.9 5,514,921 + +0.9 5,514,921 + -0.6 5,514,921 + +0.0 5,514,922 - +0.7 5,514,922 - -0.9 5,514,922 - -0.2 5,514,922 - -0.7 5,514,922 - +0.5 5,514,922 - +0.2 5,514,922 - -0.2 5,514,922 - +0.1 5,514,922 - +0.9 5,514,922 - +0.7 5,515,031 + QEN71_RS24795 0.12 +0.5 5,515,031 + QEN71_RS24795 0.12 -1.6 5,515,032 - QEN71_RS24795 0.12 -0.1 5,515,032 - QEN71_RS24795 0.12 -0.6 5,515,032 - QEN71_RS24795 0.12 -0.4 5,515,032 - QEN71_RS24795 0.12 +0.3 5,515,032 - QEN71_RS24795 0.12 -0.3 5,515,230 + -0.4 5,515,230 + -0.1 5,515,230 + +0.3 5,515,230 + +0.2 5,515,230 + -0.9 5,515,231 - +0.4 5,515,231 - -0.1 5,515,411 + QEN71_RS24800 0.25 +0.5 5,515,411 + QEN71_RS24800 0.25 -0.4 5,515,411 + QEN71_RS24800 0.25 +0.8 5,515,411 + QEN71_RS24800 0.25 +1.9 5,515,411 + QEN71_RS24800 0.25 +1.3 5,515,411 + QEN71_RS24800 0.25 -0.4 5,515,411 + QEN71_RS24800 0.25 -0.9 5,515,412 - QEN71_RS24800 0.25 -1.7 5,515,412 - QEN71_RS24800 0.25 -0.4 5,515,412 - QEN71_RS24800 0.25 +0.3 5,515,412 - QEN71_RS24800 0.25 -1.1 5,515,412 - QEN71_RS24800 0.25 -0.4 5,515,412 - QEN71_RS24800 0.25 +0.2 5,515,412 - QEN71_RS24800 0.25 +1.0 5,515,412 - QEN71_RS24800 0.25 -0.9 5,515,731 + +0.3 5,515,731 + -0.6 5,515,732 - -2.0 5,515,732 - +0.6 5,515,732 - +0.7 5,515,771 + +1.1 5,515,771 + +0.1 5,515,771 + -0.9 5,515,771 + +0.2 5,515,771 + -0.4 5,515,772 - -2.6 5,515,772 - +0.3 5,515,807 + -1.2 5,515,808 - +0.1 5,515,808 - +0.4 5,515,867 + -0.2 5,515,927 - -0.1 5,515,927 - +0.5 5,515,980 + -0.3 5,515,980 + -0.1 5,515,999 + -1.5 5,515,999 + +0.2 5,515,999 + -2.1 5,515,999 + +0.5 5,516,000 - +0.2 5,516,000 - +0.7 5,516,000 - -1.5 5,516,000 - -2.4 5,516,012 + +1.2 5,516,012 + +0.1 5,516,012 + +0.7 5,516,012 + -0.8 5,516,012 + +1.2 5,516,012 + +0.1 5,516,012 + +1.6 5,516,012 + -0.4 5,516,012 + -0.9 5,516,012 + -0.3 5,516,012 + -0.2 5,516,013 - -0.3 5,516,013 - +0.0 5,516,013 - +0.4 5,516,013 - +1.9 5,516,013 - +0.8 5,516,013 - +2.7 5,516,013 - +0.5 5,516,013 - -0.0 5,516,013 - +0.3 5,516,013 - -1.2 5,516,013 - +0.7 5,516,013 - +0.5 5,516,013 - -0.3 5,516,036 - +0.6 5,516,090 + -1.6 5,516,090 + -0.8 5,516,090 + -0.8 5,516,090 + +0.1 5,516,091 - -0.2 5,516,091 - -0.6 5,516,091 - +0.5 5,516,091 - +1.5 5,516,091 - +0.2 5,516,091 - +0.3 5,516,091 - +0.2 5,516,193 + +0.4 5,516,194 - +0.6 5,516,194 - -0.1 5,516,235 + QEN71_RS24805 0.14 -0.3 5,516,235 + QEN71_RS24805 0.14 -0.1 5,516,235 + QEN71_RS24805 0.14 +0.3 5,516,235 + QEN71_RS24805 0.14 +0.6 5,516,236 - QEN71_RS24805 0.14 +0.1 5,516,236 - QEN71_RS24805 0.14 +0.5 5,516,236 - QEN71_RS24805 0.14 +0.7 5,516,236 - QEN71_RS24805 0.14 +0.5 5,516,236 - QEN71_RS24805 0.14 -0.3 5,516,236 - QEN71_RS24805 0.14 +0.6 5,516,236 - QEN71_RS24805 0.14 -0.3 5,516,236 - QEN71_RS24805 0.14 -0.7
Or see this region's nucleotide sequence