Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS18085

Experiment: biofilm; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Aluminum chloride 1mM
3,976,477	-		LRK53_RS18080	0.50	-0.6
3,976,678	-		LRK53_RS18080	0.62	-2.4
3,976,686	+		LRK53_RS18080	0.62	+3.7
3,976,686	+		LRK53_RS18080	0.62	-0.0
3,976,687	-		LRK53_RS18080	0.62	-1.2
3,976,687	-		LRK53_RS18080	0.62	-0.7
3,976,687	-		LRK53_RS18080	0.62	-0.3
3,976,687	-		LRK53_RS18080	0.62	+0.8
3,976,687	-		LRK53_RS18080	0.62	-1.3
3,976,774	-		LRK53_RS18080	0.68	-0.7
3,976,791	+		LRK53_RS18080	0.69	+1.4
3,976,791	+		LRK53_RS18080	0.69	-1.7
3,976,791	+		LRK53_RS18080	0.69	-0.2
3,976,791	+		LRK53_RS18080	0.69	-0.3
3,976,792	-		LRK53_RS18080	0.69	-0.0
3,976,792	-		LRK53_RS18080	0.69	-0.2
3,976,792	-		LRK53_RS18080	0.69	+0.3
3,976,830	+		LRK53_RS18080	0.71	+2.3
3,976,830	+		LRK53_RS18080	0.71	-0.5
3,976,830	+		LRK53_RS18080	0.71	-0.8
3,976,830	+		LRK53_RS18080	0.71	+2.0
3,976,831	-		LRK53_RS18080	0.71	-0.2
3,977,106	+		LRK53_RS18080	0.88	-0.6
3,977,106	+		LRK53_RS18080	0.88	+2.4
3,977,106	+		LRK53_RS18080	0.88	-0.7
3,977,106	+		LRK53_RS18080	0.88	-0.4
3,977,107	-		LRK53_RS18080	0.88	+1.0
3,977,107	-		LRK53_RS18080	0.88	+0.4
3,977,107	-		LRK53_RS18080	0.88	+0.4
3,977,107	-		LRK53_RS18080	0.88	-0.9
3,977,266	+				-0.8
3,977,267	-				+2.2
3,977,267	-				+1.2
3,977,267	-				-0.7
3,977,267	-				-2.2
3,977,317	-				-0.9
3,977,317	-				+0.1
3,977,317	-				-0.1
3,977,317	-				+1.7
3,977,317	-				-0.4
3,977,317	-				-0.8
3,977,385	+				-1.3
3,977,385	+				-0.8
3,977,385	+				+0.5
3,977,385	+				+0.2
3,977,385	+				-0.7
3,977,403	+				-0.0
3,977,642	+		LRK53_RS18085	0.13	+1.7
3,977,780	+		LRK53_RS18085	0.21	-1.6
3,977,780	+		LRK53_RS18085	0.21	+1.3
3,977,781	-		LRK53_RS18085	0.22	-0.2
3,977,781	-		LRK53_RS18085	0.22	+0.9
3,977,781	-		LRK53_RS18085	0.22	-1.5
3,977,854	+		LRK53_RS18085	0.26	+1.0
3,977,854	+		LRK53_RS18085	0.26	-2.7
3,977,903	+		LRK53_RS18085	0.29	-1.7
3,977,903	+		LRK53_RS18085	0.29	+2.0
3,977,903	+		LRK53_RS18085	0.29	+1.4
3,977,903	+		LRK53_RS18085	0.29	-0.5
3,977,904	-		LRK53_RS18085	0.29	+1.0
3,977,904	-		LRK53_RS18085	0.29	+0.2
3,977,904	-		LRK53_RS18085	0.29	-0.8
3,977,904	-		LRK53_RS18085	0.29	-0.5
3,977,904	-		LRK53_RS18085	0.29	-2.9
3,978,054	-		LRK53_RS18085	0.38	-1.5
3,978,054	-		LRK53_RS18085	0.38	-0.5
3,978,065	+		LRK53_RS18085	0.39	-0.4
3,978,065	+		LRK53_RS18085	0.39	-0.6
3,978,065	+		LRK53_RS18085	0.39	-1.5
3,978,066	-		LRK53_RS18085	0.39	+0.4
3,978,066	-		LRK53_RS18085	0.39	-0.7
3,978,066	-		LRK53_RS18085	0.39	-0.1
3,978,066	-		LRK53_RS18085	0.39	-0.0
3,978,161	+		LRK53_RS18085	0.45	-0.9
3,978,161	+		LRK53_RS18085	0.45	+0.2
3,978,161	+		LRK53_RS18085	0.45	-1.9
3,978,162	-		LRK53_RS18085	0.45	-0.3
3,978,185	+		LRK53_RS18085	0.46	+0.2
3,978,185	+		LRK53_RS18085	0.46	-0.3
3,978,185	+		LRK53_RS18085	0.46	-0.9
3,978,185	+		LRK53_RS18085	0.46	-1.5
3,978,186	-		LRK53_RS18085	0.46	-1.2
3,978,186	-		LRK53_RS18085	0.46	+0.4
3,978,186	-		LRK53_RS18085	0.46	-1.2
3,978,288	-		LRK53_RS18085	0.52	-1.6
3,978,288	-		LRK53_RS18085	0.52	-0.8
3,978,288	-		LRK53_RS18085	0.52	+0.2
3,978,288	-		LRK53_RS18085	0.52	-0.0
3,978,288	-		LRK53_RS18085	0.52	+2.4
3,978,407	+		LRK53_RS18085	0.60	-2.3
3,978,407	+		LRK53_RS18085	0.60	-0.7
3,978,407	+		LRK53_RS18085	0.60	-1.5
3,978,407	+		LRK53_RS18085	0.60	-0.7
3,978,407	+		LRK53_RS18085	0.60	-0.2
3,978,408	-		LRK53_RS18085	0.60	-1.5
3,978,408	-		LRK53_RS18085	0.60	-0.6
3,978,408	-		LRK53_RS18085	0.60	+0.7
3,978,408	-		LRK53_RS18085	0.60	-0.3
3,978,408	-		LRK53_RS18085	0.60	-2.0
3,978,428	+		LRK53_RS18085	0.61	+0.4
3,978,429	-		LRK53_RS18085	0.61	-0.0
3,978,536	+		LRK53_RS18085	0.67	-0.7
3,978,536	+		LRK53_RS18085	0.67	+0.2
3,978,536	+		LRK53_RS18085	0.67	+0.4
3,978,536	+		LRK53_RS18085	0.67	+0.4
3,978,537	-		LRK53_RS18085	0.67	+0.4
3,978,537	-		LRK53_RS18085	0.67	-1.2
3,978,734	+		LRK53_RS18085	0.79	-2.3
3,978,734	+		LRK53_RS18085	0.79	-0.2
3,978,734	+		LRK53_RS18085	0.79	+0.5
3,978,735	-		LRK53_RS18085	0.79	-0.7
3,978,735	-		LRK53_RS18085	0.79	-4.0
3,978,735	-		LRK53_RS18085	0.79	-1.0
3,978,735	-		LRK53_RS18085	0.79	-1.4
3,978,735	-		LRK53_RS18085	0.79	-1.6
3,978,735	-		LRK53_RS18085	0.79	-0.2
3,978,735	-		LRK53_RS18085	0.79	-0.7
3,978,980	+				+0.5
3,978,980	+				-1.9
3,978,981	-				-1.5
3,978,981	-				-0.8
3,978,981	-				-1.6
3,978,981	-				-1.0
3,978,990	-				+0.5
3,978,990	-				-0.7
3,979,127	+				-1.2
3,979,127	+				-0.5
3,979,127	+				-0.4
3,979,128	-				+0.2
3,979,128	-				-2.9
3,979,128	-				-1.3
3,979,128	-				+0.4
3,979,369	+				+1.6
3,979,369	+				-0.0
3,979,370	-				-1.1
3,979,370	-				-3.9
3,979,471	+		LRK53_RS18090	0.11	-0.7
3,979,471	+		LRK53_RS18090	0.11	+0.3
3,979,471	+		LRK53_RS18090	0.11	-1.4
3,979,471	+		LRK53_RS18090	0.11	+1.0
3,979,472	-		LRK53_RS18090	0.11	+0.2
3,979,666	+		LRK53_RS18090	0.20	-1.1
3,979,666	+		LRK53_RS18090	0.20	-1.0
3,979,801	+		LRK53_RS18090	0.27	-0.7
3,979,801	+		LRK53_RS18090	0.27	-1.2
3,979,801	+		LRK53_RS18090	0.27	-0.3
3,979,801	+		LRK53_RS18090	0.27	-0.7
3,979,802	-		LRK53_RS18090	0.27	+1.2
3,979,802	-		LRK53_RS18090	0.27	-1.7
3,979,813	+		LRK53_RS18090	0.27	+0.8
3,979,813	+		LRK53_RS18090	0.27	-0.3
3,979,813	+		LRK53_RS18090	0.27	+2.4
3,979,813	+		LRK53_RS18090	0.27	-0.5
3,979,813	+		LRK53_RS18090	0.27	-0.0
3,979,813	+		LRK53_RS18090	0.27	-1.6
3,979,813	+		LRK53_RS18090	0.27	+0.9
3,979,813	+		LRK53_RS18090	0.27	+3.7
3,979,813	+		LRK53_RS18090	0.27	-0.0
3,979,813	+		LRK53_RS18090	0.27	-1.1
3,979,813	+		LRK53_RS18090	0.27	-1.7
3,979,813	+		LRK53_RS18090	0.27	-1.1
3,979,813	+		LRK53_RS18090	0.27	-1.7
3,979,813	+		LRK53_RS18090	0.27	+0.2
3,979,813	+		LRK53_RS18090	0.27	-1.0
3,979,813	+		LRK53_RS18090	0.27	+2.4
3,979,813	+		LRK53_RS18090	0.27	+0.1
3,979,813	+		LRK53_RS18090	0.27	+0.4
3,979,814	-		LRK53_RS18090	0.27	-0.0
3,979,814	-		LRK53_RS18090	0.27	-1.8
3,979,814	-		LRK53_RS18090	0.27	+1.9
3,979,814	-		LRK53_RS18090	0.27	+0.4
3,979,814	-		LRK53_RS18090	0.27	-0.8
3,979,814	-		LRK53_RS18090	0.27	-0.3
3,979,814	-		LRK53_RS18090	0.27	-1.5
3,979,814	-		LRK53_RS18090	0.27	-1.4
3,979,880	-		LRK53_RS18090	0.30	-0.5
3,979,880	-		LRK53_RS18090	0.30	-1.9
3,980,021	+		LRK53_RS18090	0.37	-0.7
3,980,022	+		LRK53_RS18090	0.37	+0.2
3,980,022	+		LRK53_RS18090	0.37	+0.2
3,980,022	+		LRK53_RS18090	0.37	-0.8
3,980,022	+		LRK53_RS18090	0.37	-1.3
3,980,022	+		LRK53_RS18090	0.37	+0.2
3,980,022	+		LRK53_RS18090	0.37	-0.6
3,980,022	+		LRK53_RS18090	0.37	+1.8
3,980,023	-		LRK53_RS18090	0.37	-0.7
3,980,023	-		LRK53_RS18090	0.37	-0.2
3,980,023	-		LRK53_RS18090	0.37	+0.2
3,980,023	-		LRK53_RS18090	0.37	-0.4
3,980,023	-		LRK53_RS18090	0.37	+0.3
3,980,023	-		LRK53_RS18090	0.37	-0.2
3,980,023	-		LRK53_RS18090	0.37	-0.7
3,980,023	-		LRK53_RS18090	0.37	+0.8
3,980,023	-		LRK53_RS18090	0.37	-0.1