Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17885

Experiment: biofilm; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Aluminum chloride 1mM
3,928,314	+				+2.0
3,928,315	-				-0.3
3,928,359	-				-1.9
3,928,370	+				+0.2
3,928,370	+				+1.5
3,928,371	-				-0.3
3,928,404	-				-0.5
3,928,432	+		LRK53_RS17880	0.11	-1.1
3,928,433	-		LRK53_RS17880	0.11	-0.1
3,928,455	-		LRK53_RS17880	0.14	-0.7
3,928,514	+		LRK53_RS17880	0.22	-1.0
3,928,514	+		LRK53_RS17880	0.22	+0.1
3,928,688	+		LRK53_RS17880	0.44	+0.2
3,928,688	+		LRK53_RS17880	0.44	-1.6
3,928,688	+		LRK53_RS17880	0.44	+0.7
3,928,689	-		LRK53_RS17880	0.44	-0.8
3,928,689	-		LRK53_RS17880	0.44	+0.9
3,928,689	-		LRK53_RS17880	0.44	-2.3
3,928,793	+		LRK53_RS17880	0.58	-0.0
3,928,793	+		LRK53_RS17880	0.58	-0.0
3,928,793	+		LRK53_RS17880	0.58	+0.5
3,928,793	+		LRK53_RS17880	0.58	+0.3
3,928,794	-		LRK53_RS17880	0.58	-0.7
3,928,794	-		LRK53_RS17880	0.58	-1.6
3,928,794	-		LRK53_RS17880	0.58	-0.9
3,928,794	-		LRK53_RS17880	0.58	-0.6
3,928,794	-		LRK53_RS17880	0.58	-0.0
3,928,794	-		LRK53_RS17880	0.58	+0.5
3,928,794	-		LRK53_RS17880	0.58	-0.5
3,928,794	-		LRK53_RS17880	0.58	+2.0
3,928,794	-		LRK53_RS17880	0.58	+0.6
3,928,794	-		LRK53_RS17880	0.58	-0.8
3,928,794	-		LRK53_RS17880	0.58	-1.1
3,928,835	+		LRK53_RS17880	0.63	-1.1
3,928,836	-		LRK53_RS17880	0.63	-0.3
3,928,836	-		LRK53_RS17880	0.63	-0.5
3,928,904	+		LRK53_RS17880	0.72	-0.6
3,928,904	+		LRK53_RS17880	0.72	+0.2
3,928,904	+		LRK53_RS17880	0.72	-1.1
3,928,905	-		LRK53_RS17880	0.72	+0.4
3,928,905	-		LRK53_RS17880	0.72	+0.2
3,928,905	-		LRK53_RS17880	0.72	-2.8
3,928,923	-		LRK53_RS17880	0.75	-1.0
3,928,923	-		LRK53_RS17880	0.75	+0.2
3,928,949	+		LRK53_RS17880	0.78	-0.3
3,929,146	+				-1.6
3,929,146	+				-2.6
3,929,146	+				-0.2
3,929,146	+				-0.6
3,929,146	+				-0.8
3,929,146	+				+3.7
3,929,146	+				-0.1
3,929,146	+				+0.6
3,929,146	+				-3.2
3,929,147	-				+0.0
3,929,147	-				+1.0
3,929,147	-				+3.4
3,929,147	-				+0.8
3,929,147	-				+0.8
3,929,147	-				+1.1
3,929,147	-				-0.7
3,929,147	-				+0.4
3,929,147	-				-0.8
3,929,147	-				-1.0
3,929,147	-				-1.2
3,929,147	-				-0.2
3,929,147	-				-0.8
3,929,147	-				-1.5
3,929,147	-				-0.4
3,929,147	-				-2.6
3,929,147	-				-1.9
3,929,205	+				-1.7
3,929,205	+				+2.2
3,929,205	+				-0.6
3,929,205	+				-1.0
3,929,205	+				-0.6
3,929,205	+				-1.0
3,929,205	+				+0.4
3,929,206	-				-0.7
3,929,206	-				+0.7
3,929,206	-				-1.2
3,929,206	-				-1.8
3,929,206	-				+3.0
3,929,206	-				-0.6
3,929,224	+				-2.6
3,929,282	+				-0.2
3,929,283	-				-0.3
3,929,369	+		LRK53_RS17885	0.15	-0.7
3,929,369	+		LRK53_RS17885	0.15	-0.7
3,929,369	+		LRK53_RS17885	0.15	-0.0
3,929,370	-		LRK53_RS17885	0.15	-0.5
3,929,486	+		LRK53_RS17885	0.33	-0.0
3,929,561	+		LRK53_RS17885	0.44	-1.1
3,929,841	-		LRK53_RS17885	0.88	+0.2
3,929,891	+				+0.2
3,929,981	+				-1.3
3,929,981	+				-0.4
3,929,981	+				-2.6
3,929,981	+				-1.7
3,929,981	+				-1.4
3,929,981	+				-0.7
3,929,982	-				-2.2
3,929,982	-				-1.2
3,929,982	-				+0.4
3,929,982	-				-0.3
3,929,982	-				-1.0
3,930,003	+				-0.7
3,930,003	+				+0.8
3,930,004	-				+0.9
3,930,004	-				-0.6
3,930,004	-				-0.6
3,930,004	-				-0.1
3,930,004	-				-0.6
3,930,005	+				-2.3
3,930,005	+				-0.8
3,930,005	+				-2.5
3,930,005	+				-1.8
3,930,005	+				-1.6
3,930,005	+				+0.8
3,930,005	+				+1.1
3,930,005	+				-0.2
3,930,005	+				-0.6
3,930,006	-				+0.4
3,930,006	-				+0.2
3,930,006	-				-1.1
3,930,006	-				-0.9
3,930,006	-				+0.2
3,930,006	-				-0.6
3,930,006	-				+0.1
3,930,006	-				-0.5
3,930,006	-				-1.2
3,930,006	-				-0.1
3,930,006	-				-0.7
3,930,025	+				+0.1
3,930,025	+				-1.1
3,930,114	+		LRK53_RS17890	0.13	-1.3
3,930,114	+		LRK53_RS17890	0.13	-1.6
3,930,114	+		LRK53_RS17890	0.13	-1.4
3,930,114	+		LRK53_RS17890	0.13	-1.2
3,930,114	+		LRK53_RS17890	0.13	-1.1
3,930,114	+		LRK53_RS17890	0.13	+0.2
3,930,115	-		LRK53_RS17890	0.13	-1.1
3,930,115	-		LRK53_RS17890	0.13	-1.4
3,930,115	-		LRK53_RS17890	0.13	-0.3
3,930,115	-		LRK53_RS17890	0.13	-0.3
3,930,115	-		LRK53_RS17890	0.13	+0.9
3,930,180	+		LRK53_RS17890	0.23	+1.8
3,930,180	+		LRK53_RS17890	0.23	-0.9
3,930,180	+		LRK53_RS17890	0.23	-1.5
3,930,180	+		LRK53_RS17890	0.23	-1.7
3,930,180	+		LRK53_RS17890	0.23	-1.9
3,930,180	+		LRK53_RS17890	0.23	+0.5
3,930,180	+		LRK53_RS17890	0.23	+0.0
3,930,180	+		LRK53_RS17890	0.23	-0.3
3,930,180	+		LRK53_RS17890	0.23	-1.5
3,930,180	+		LRK53_RS17890	0.23	+0.2
3,930,180	+		LRK53_RS17890	0.23	-0.9
3,930,180	+		LRK53_RS17890	0.23	-0.4
3,930,180	+		LRK53_RS17890	0.23	-0.7
3,930,181	-		LRK53_RS17890	0.23	-0.8
3,930,181	-		LRK53_RS17890	0.23	-0.9
3,930,181	-		LRK53_RS17890	0.23	-1.3
3,930,181	-		LRK53_RS17890	0.23	+2.4
3,930,181	-		LRK53_RS17890	0.23	-1.2
3,930,181	-		LRK53_RS17890	0.23	-1.0
3,930,181	-		LRK53_RS17890	0.23	-0.5
3,930,181	-		LRK53_RS17890	0.23	+0.3
3,930,181	-		LRK53_RS17890	0.23	-0.1
3,930,181	-		LRK53_RS17890	0.23	-0.9
3,930,181	-		LRK53_RS17890	0.23	-0.3
3,930,181	-		LRK53_RS17890	0.23	+0.9
3,930,181	-		LRK53_RS17890	0.23	-1.2
3,930,181	-		LRK53_RS17890	0.23	-0.9
3,930,181	-		LRK53_RS17890	0.23	-1.5
3,930,181	-		LRK53_RS17890	0.23	-0.5
3,930,181	-		LRK53_RS17890	0.23	-1.0
3,930,181	-		LRK53_RS17890	0.23	+0.4
3,930,186	+		LRK53_RS17890	0.24	+0.4
3,930,364	-		LRK53_RS17890	0.52	+1.2
3,930,364	-		LRK53_RS17890	0.52	-0.5
3,930,596	+		LRK53_RS17890	0.88	-0.2
3,930,631	-				-0.2
3,930,631	-				-0.9
3,930,673	-				+0.3
3,930,754	+				+0.1