Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17625

Experiment: biofilm; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Aluminum chloride 1mM
3,863,691	+		LRK53_RS17620	0.42	-0.9
3,863,692	-		LRK53_RS17620	0.42	-0.0
3,863,692	-		LRK53_RS17620	0.42	-2.3
3,863,692	-		LRK53_RS17620	0.42	+0.6
3,863,716	+		LRK53_RS17620	0.44	+0.0
3,863,716	+		LRK53_RS17620	0.44	-1.9
3,863,716	+		LRK53_RS17620	0.44	-2.1
3,863,716	+		LRK53_RS17620	0.44	+0.4
3,863,717	-		LRK53_RS17620	0.44	-1.6
3,863,717	-		LRK53_RS17620	0.44	+2.3
3,863,717	-		LRK53_RS17620	0.44	+1.8
3,863,717	-		LRK53_RS17620	0.44	+0.1
3,863,717	-		LRK53_RS17620	0.44	-1.2
3,863,717	-		LRK53_RS17620	0.44	-1.1
3,863,720	+		LRK53_RS17620	0.44	-0.6
3,863,720	+		LRK53_RS17620	0.44	+1.0
3,863,720	+		LRK53_RS17620	0.44	+0.5
3,863,720	+		LRK53_RS17620	0.44	+1.3
3,863,721	-		LRK53_RS17620	0.44	+1.4
3,863,721	-		LRK53_RS17620	0.44	-0.2
3,863,721	-		LRK53_RS17620	0.44	-0.6
3,863,721	-		LRK53_RS17620	0.44	-2.0
3,863,759	-		LRK53_RS17620	0.47	-1.5
3,863,759	-		LRK53_RS17620	0.47	-1.1
3,863,823	+		LRK53_RS17620	0.52	-2.5
3,863,823	+		LRK53_RS17620	0.52	-0.2
3,863,823	+		LRK53_RS17620	0.52	+0.2
3,863,823	+		LRK53_RS17620	0.52	+0.2
3,863,824	-		LRK53_RS17620	0.52	-0.5
3,863,824	-		LRK53_RS17620	0.52	-0.8
3,863,835	+		LRK53_RS17620	0.52	+0.4
3,863,835	+		LRK53_RS17620	0.52	+0.1
3,863,836	-		LRK53_RS17620	0.53	-0.5
3,863,886	-		LRK53_RS17620	0.56	+0.1
3,863,921	+		LRK53_RS17620	0.59	-0.3
3,863,922	-		LRK53_RS17620	0.59	+0.2
3,863,971	+		LRK53_RS17620	0.62	-1.6
3,863,971	+		LRK53_RS17620	0.62	+0.0
3,863,971	+		LRK53_RS17620	0.62	-0.8
3,863,971	+		LRK53_RS17620	0.62	-0.2
3,863,972	-		LRK53_RS17620	0.63	-0.4
3,863,972	-		LRK53_RS17620	0.63	-1.6
3,863,972	-		LRK53_RS17620	0.63	+1.0
3,864,003	-		LRK53_RS17620	0.65	+1.5
3,864,093	-		LRK53_RS17620	0.71	-1.9
3,864,093	-		LRK53_RS17620	0.71	+0.6
3,864,093	-		LRK53_RS17620	0.71	-0.5
3,864,093	-		LRK53_RS17620	0.71	-1.8
3,864,407	+				+1.1
3,864,408	-				-1.8
3,864,408	-				-0.9
3,864,479	+				+1.7
3,864,480	-				-1.1
3,864,571	+				-1.2
3,864,572	-				+1.2
3,864,572	-				-0.7
3,864,572	-				-1.9
3,864,572	-				-0.0
3,864,602	+				-0.2
3,864,602	+				-0.6
3,864,602	+				-0.6
3,864,602	+				+0.9
3,864,640	+				-0.0
3,864,640	+				-2.3
3,864,640	+				-0.4
3,864,640	+				-1.1
3,864,641	-				-0.2
3,864,641	-				+0.7
3,864,658	-				-1.8
3,864,658	-				-2.2
3,864,681	+		LRK53_RS17625	0.19	-1.2
3,864,681	+		LRK53_RS17625	0.19	+2.0
3,864,681	+		LRK53_RS17625	0.19	-1.2
3,864,681	+		LRK53_RS17625	0.19	-0.2
3,864,682	-		LRK53_RS17625	0.20	-0.9
3,864,800	-				-2.0
3,864,834	+				+0.4
3,864,932	+		LRK53_RS17630	0.12	-0.7
3,864,933	-		LRK53_RS17630	0.12	+1.0
3,864,981	+		LRK53_RS17630	0.19	+0.2
3,864,981	+		LRK53_RS17630	0.19	-0.1
3,864,981	+		LRK53_RS17630	0.19	-0.2
3,864,981	+		LRK53_RS17630	0.19	-0.2
3,864,981	+		LRK53_RS17630	0.19	+1.0
3,864,981	+		LRK53_RS17630	0.19	+0.3
3,864,982	-		LRK53_RS17630	0.19	+0.2
3,864,982	-		LRK53_RS17630	0.19	-0.6
3,864,982	-		LRK53_RS17630	0.19	-1.8
3,864,982	-		LRK53_RS17630	0.19	-0.5
3,865,005	+		LRK53_RS17630	0.22	+0.1
3,865,032	+		LRK53_RS17630	0.26	-0.7
3,865,032	+		LRK53_RS17630	0.26	-2.9
3,865,032	+		LRK53_RS17630	0.26	-0.7
3,865,032	+		LRK53_RS17630	0.26	-2.1
3,865,032	+		LRK53_RS17630	0.26	-2.7
3,865,033	-		LRK53_RS17630	0.26	+0.5
3,865,033	-		LRK53_RS17630	0.26	-0.4
3,865,033	-		LRK53_RS17630	0.26	+0.2
3,865,033	-		LRK53_RS17630	0.26	-0.8
3,865,033	-		LRK53_RS17630	0.26	-0.2
3,865,033	-		LRK53_RS17630	0.26	-1.0
3,865,141	+		LRK53_RS17630	0.42	-0.6
3,865,141	+		LRK53_RS17630	0.42	-0.7
3,865,142	-		LRK53_RS17630	0.42	-1.2
3,865,162	+		LRK53_RS17630	0.45	-2.3
3,865,162	+		LRK53_RS17630	0.45	-1.8
3,865,162	+		LRK53_RS17630	0.45	-1.1
3,865,162	+		LRK53_RS17630	0.45	-0.3
3,865,162	+		LRK53_RS17630	0.45	-0.2
3,865,162	+		LRK53_RS17630	0.45	-0.4
3,865,162	+		LRK53_RS17630	0.45	+0.8
3,865,162	+		LRK53_RS17630	0.45	-0.3
3,865,163	-		LRK53_RS17630	0.45	-2.6
3,865,163	-		LRK53_RS17630	0.45	-2.4
3,865,163	-		LRK53_RS17630	0.45	-0.1
3,865,163	-		LRK53_RS17630	0.45	-0.6
3,865,163	-		LRK53_RS17630	0.45	+0.7
3,865,238	+		LRK53_RS17630	0.56	+0.5
3,865,274	-		LRK53_RS17630	0.62	+0.7
3,865,274	-		LRK53_RS17630	0.62	+1.5
3,865,346	-		LRK53_RS17630	0.72	+0.2
3,865,465	-		LRK53_RS17630	0.89	-1.1
3,865,465	-		LRK53_RS17630	0.89	-0.7
3,865,465	-		LRK53_RS17630	0.89	+0.0
3,865,514	+				-1.8
3,865,514	+				-0.4
3,865,514	+				-3.0
3,865,514	+				+1.0
3,865,514	+				-0.2
3,865,514	+				+0.1
3,865,514	+				-1.5
3,865,514	+				-0.8
3,865,514	+				-0.7
3,865,514	+				-1.3
3,865,514	+				+0.6
3,865,514	+				-1.4
3,865,514	+				-0.0
3,865,514	+				-1.2
3,865,514	+				+0.3
3,865,514	+				-1.9
3,865,514	+				-2.3
3,865,514	+				+0.4
3,865,514	+				-0.1
3,865,514	+				+0.4
3,865,514	+				+0.0
3,865,514	+				-1.8
3,865,514	+				-0.2
3,865,514	+				-0.0
3,865,514	+				-1.4
3,865,514	+				-0.0
3,865,514	+				-0.6
3,865,514	+				+0.2
3,865,515	-				-1.0
3,865,515	-				+0.2
3,865,515	-				-1.2
3,865,515	-				-0.9
3,865,515	-				-0.9
3,865,515	-				+1.4
3,865,515	-				-0.2
3,865,515	-				-0.3
3,865,515	-				-0.2
3,865,515	-				-0.7
3,865,515	-				-3.0
3,865,515	-				-0.1
3,865,515	-				-0.6
3,865,515	-				+1.2
3,865,515	-				+1.4
3,865,515	-				-1.8
3,865,515	-				+1.0
3,865,515	-				+1.3
3,865,515	-				-0.1
3,865,515	-				-1.8
3,865,515	-				-2.1
3,865,515	-				-0.0
3,865,515	-				-0.1
3,865,515	-				-0.8
3,865,515	-				-1.4
3,865,515	-				+0.2
3,865,515	-				-0.8
3,865,515	-				-1.0
3,865,515	-				-0.6
3,865,515	-				-1.6
3,865,515	-				+0.4
3,865,543	+				-0.7
3,865,543	+				-1.9
3,865,543	+				+0.8
3,865,544	-				+0.7
3,865,544	-				-1.3
3,865,550	-				-0.5
3,865,550	-				-0.7
3,865,550	-				-0.2
3,865,550	-				+2.0
3,865,550	-				-0.9
3,865,550	-				-2.1
3,865,550	-				-0.0
3,865,550	-				-2.1
3,865,687	-				+1.3
3,865,716	+		LRK53_RS17635	0.10	-1.0
3,865,716	+		LRK53_RS17635	0.10	-0.8