Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17540

Experiment: biofilm; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Aluminum chloride 1mM
3,844,036	+				-0.8
3,844,042	-				-0.3
3,844,286	+		LRK53_RS17535	0.24	-0.2
3,844,286	+		LRK53_RS17535	0.24	+0.4
3,844,286	+		LRK53_RS17535	0.24	-0.2
3,844,286	+		LRK53_RS17535	0.24	-1.4
3,844,286	+		LRK53_RS17535	0.24	+1.4
3,844,286	+		LRK53_RS17535	0.24	+1.3
3,844,286	+		LRK53_RS17535	0.24	+1.5
3,844,286	+		LRK53_RS17535	0.24	-1.8
3,844,286	+		LRK53_RS17535	0.24	+1.0
3,844,286	+		LRK53_RS17535	0.24	+2.6
3,844,286	+		LRK53_RS17535	0.24	-0.5
3,844,286	+		LRK53_RS17535	0.24	-0.1
3,844,286	+		LRK53_RS17535	0.24	-1.3
3,844,286	+		LRK53_RS17535	0.24	+1.2
3,844,286	+		LRK53_RS17535	0.24	-2.3
3,844,286	+		LRK53_RS17535	0.24	-0.6
3,844,286	+		LRK53_RS17535	0.24	+0.7
3,844,286	+		LRK53_RS17535	0.24	+0.3
3,844,286	+		LRK53_RS17535	0.24	-0.4
3,844,286	+		LRK53_RS17535	0.24	-1.5
3,844,287	-		LRK53_RS17535	0.24	+0.2
3,844,287	-		LRK53_RS17535	0.24	-0.2
3,844,287	-		LRK53_RS17535	0.24	-1.6
3,844,287	-		LRK53_RS17535	0.24	-0.5
3,844,287	-		LRK53_RS17535	0.24	-0.6
3,844,287	-		LRK53_RS17535	0.24	-0.0
3,844,287	-		LRK53_RS17535	0.24	+2.2
3,844,287	-		LRK53_RS17535	0.24	+0.4
3,844,287	-		LRK53_RS17535	0.24	+0.8
3,844,287	-		LRK53_RS17535	0.24	+1.8
3,844,287	-		LRK53_RS17535	0.24	-0.2
3,844,287	-		LRK53_RS17535	0.24	-2.1
3,844,287	-		LRK53_RS17535	0.24	-1.2
3,844,287	-		LRK53_RS17535	0.24	+0.8
3,844,287	-		LRK53_RS17535	0.24	-0.3
3,844,287	-		LRK53_RS17535	0.24	-1.0
3,844,287	-		LRK53_RS17535	0.24	-1.5
3,844,287	-		LRK53_RS17535	0.24	-1.1
3,844,287	-		LRK53_RS17535	0.24	+2.4
3,844,287	-		LRK53_RS17535	0.24	-0.7
3,844,304	+		LRK53_RS17535	0.26	-1.2
3,844,304	+		LRK53_RS17535	0.26	+0.8
3,844,304	+		LRK53_RS17535	0.26	+0.9
3,844,305	-		LRK53_RS17535	0.26	-0.6
3,844,305	-		LRK53_RS17535	0.26	-0.0
3,844,328	+		LRK53_RS17535	0.29	-1.4
3,844,328	+		LRK53_RS17535	0.29	+0.6
3,844,328	+		LRK53_RS17535	0.29	-2.6
3,844,329	-		LRK53_RS17535	0.29	-0.3
3,844,329	-		LRK53_RS17535	0.29	-0.5
3,844,329	-		LRK53_RS17535	0.29	-0.9
3,844,389	-		LRK53_RS17535	0.36	-0.0
3,844,427	+		LRK53_RS17535	0.40	+1.3
3,844,427	+		LRK53_RS17535	0.40	-0.6
3,844,460	-		LRK53_RS17535	0.44	-2.2
3,844,538	+		LRK53_RS17535	0.54	+0.2
3,844,538	+		LRK53_RS17535	0.54	-0.3
3,844,538	+		LRK53_RS17535	0.54	-1.0
3,844,538	+		LRK53_RS17535	0.54	-0.1
3,844,538	+		LRK53_RS17535	0.54	+0.4
3,844,538	+		LRK53_RS17535	0.54	+1.1
3,844,538	+		LRK53_RS17535	0.54	-1.0
3,844,538	+		LRK53_RS17535	0.54	-1.8
3,844,539	-		LRK53_RS17535	0.54	-0.5
3,844,539	-		LRK53_RS17535	0.54	-0.5
3,844,539	-		LRK53_RS17535	0.54	-0.2
3,844,539	-		LRK53_RS17535	0.54	+0.2
3,844,539	-		LRK53_RS17535	0.54	-1.1
3,844,539	-		LRK53_RS17535	0.54	-1.2
3,844,539	-		LRK53_RS17535	0.54	+1.1
3,844,541	+		LRK53_RS17535	0.54	-1.6
3,844,541	+		LRK53_RS17535	0.54	-1.8
3,844,541	+		LRK53_RS17535	0.54	+0.4
3,844,541	+		LRK53_RS17535	0.54	-1.6
3,844,541	+		LRK53_RS17535	0.54	+1.1
3,844,630	-		LRK53_RS17535	0.64	+0.1
3,844,693	+		LRK53_RS17535	0.72	-0.3
3,844,693	+		LRK53_RS17535	0.72	-0.9
3,844,693	+		LRK53_RS17535	0.72	-0.5
3,844,693	+		LRK53_RS17535	0.72	-0.5
3,844,693	+		LRK53_RS17535	0.72	-1.0
3,844,693	+		LRK53_RS17535	0.72	-0.8
3,844,694	-		LRK53_RS17535	0.72	-0.6
3,844,694	-		LRK53_RS17535	0.72	-0.0
3,844,869	-				-0.7
3,845,304	+		LRK53_RS17540	0.76	+0.1
3,845,305	-		LRK53_RS17540	0.76	+0.4
3,845,359	+		LRK53_RS17540	0.89	-1.3
3,845,360	-		LRK53_RS17540	0.89	-0.5
3,845,360	-		LRK53_RS17540	0.89	-2.3
3,845,360	-		LRK53_RS17540	0.89	-2.0
3,845,443	+				-1.4
3,845,444	-				-0.9
3,845,502	+				+3.3
3,845,502	+				-0.9
3,845,502	+				-0.3
3,845,502	+				-2.8
3,845,502	+				-0.7
3,845,503	-				-0.5
3,845,503	-				-0.7
3,845,503	-				+0.2
3,845,503	-				+0.8
3,845,509	+				-0.8
3,845,509	+				+1.1
3,845,509	+				-1.6
3,845,509	+				+0.9
3,845,510	-				+0.1
3,845,510	-				-0.1
3,845,510	-				-0.0
3,845,510	-				-0.0
3,845,510	-				-0.1
3,845,515	+				-0.9
3,845,549	+				-1.0
3,845,549	+				+2.0
3,845,549	+				-0.9
3,845,549	+				-0.6
3,845,549	+				+0.4
3,845,549	+				-0.4
3,845,549	+				+0.4
3,845,549	+				-1.6
3,845,549	+				+0.3
3,845,549	+				-0.6
3,845,549	+				-0.2
3,845,549	+				-0.3
3,845,549	+				-1.1
3,845,549	+				-0.4
3,845,549	+				-0.1
3,845,550	-				-3.1
3,845,550	-				+0.3
3,845,550	-				-0.2
3,845,550	-				-0.9
3,845,550	-				+2.1
3,845,550	-				-2.4
3,845,550	-				-2.1
3,845,550	-				+0.2
3,845,550	-				-0.2
3,845,665	+				-0.2
3,845,665	+				+0.3
3,845,665	+				-0.8
3,845,671	+				+1.6
3,845,671	+				-0.4
3,845,680	+				+0.9
3,845,680	+				+0.7
3,845,680	+				+2.1
3,845,680	+				-0.3
3,845,680	+				+0.3
3,845,680	+				-0.6
3,845,681	-				-0.3
3,845,681	-				-1.1
3,845,681	-				-0.9
3,845,681	-				-0.4
3,845,716	+				+0.8
3,845,717	-				-2.6
3,845,717	-				-0.8
3,845,738	+				-1.5
3,845,804	+				-0.8
3,845,804	+				-0.5
3,845,804	+				-0.2
3,845,805	-				+0.7
3,845,805	-				+2.2
3,845,900	-				-1.9
3,845,900	-				+0.2
3,845,900	-				-0.2
3,845,900	-				+0.8
3,845,900	-				+0.2
3,845,900	-				-0.1
3,845,900	-				+0.4
3,845,900	-				-0.1
3,845,900	-				-0.2
3,845,900	-				-0.3
3,845,963	-				-0.1
3,845,963	-				+1.6
3,846,002	+				+0.4
3,846,002	+				-0.5
3,846,002	+				+0.0
3,846,003	-				-1.1
3,846,003	-				+0.3
3,846,018	+				-1.1
3,846,019	-				+0.1
3,846,019	-				-0.1
3,846,032	+				-1.9
3,846,032	+				-0.2
3,846,032	+				-0.2
3,846,032	+				-1.6
3,846,032	+				-0.3
3,846,032	+				+1.4
3,846,033	-				-0.2
3,846,033	-				-0.8
3,846,033	-				-0.7
3,846,080	-		LRK53_RS17545	0.11	+1.0
3,846,120	+		LRK53_RS17545	0.12	-0.1
3,846,120	+		LRK53_RS17545	0.12	-0.2
3,846,150	+		LRK53_RS17545	0.13	-0.2
3,846,151	-		LRK53_RS17545	0.13	-0.9
3,846,226	-		LRK53_RS17545	0.14	-0.5
3,846,300	+		LRK53_RS17545	0.16	+1.4
3,846,392	+		LRK53_RS17545	0.18	+0.5
3,846,392	+		LRK53_RS17545	0.18	-0.5
3,846,392	+		LRK53_RS17545	0.18	-1.3
3,846,393	-		LRK53_RS17545	0.18	-0.6