Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16865

Experiment: biofilm; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Aluminum chloride 1mM
3,706,281	+		LRK53_RS16855	0.57	-1.5
3,706,281	+		LRK53_RS16855	0.57	+1.3
3,706,281	+		LRK53_RS16855	0.57	-2.4
3,706,281	+		LRK53_RS16855	0.57	-1.8
3,706,281	+		LRK53_RS16855	0.57	-0.0
3,706,281	+		LRK53_RS16855	0.57	+1.8
3,706,281	+		LRK53_RS16855	0.57	+0.8
3,706,282	-		LRK53_RS16855	0.57	-0.2
3,706,282	-		LRK53_RS16855	0.57	+1.0
3,706,282	-		LRK53_RS16855	0.57	-0.9
3,706,410	+		LRK53_RS16855	0.68	+0.2
3,706,410	+		LRK53_RS16855	0.68	-0.2
3,706,410	+		LRK53_RS16855	0.68	+0.6
3,706,410	+		LRK53_RS16855	0.68	-1.8
3,706,410	+		LRK53_RS16855	0.68	-1.8
3,706,411	-		LRK53_RS16855	0.68	-0.5
3,706,411	-		LRK53_RS16855	0.68	-0.2
3,706,411	-		LRK53_RS16855	0.68	-1.7
3,706,411	-		LRK53_RS16855	0.68	-1.3
3,706,411	-		LRK53_RS16855	0.68	-1.7
3,706,669	+				-0.4
3,706,669	+				-1.2
3,706,670	-				+1.5
3,706,670	-				-0.6
3,706,692	+				-0.0
3,706,692	+				-0.3
3,706,692	+				+0.8
3,706,693	-				+0.4
3,706,693	-				-0.1
3,706,693	-				-0.0
3,706,693	-				+3.7
3,706,693	-				+0.2
3,706,764	+				-1.0
3,706,765	-				+0.4
3,706,798	+				+1.8
3,706,798	+				+3.7
3,706,798	+				+0.7
3,706,798	+				+0.8
3,706,798	+				+1.4
3,706,798	+				-1.1
3,706,798	+				+1.0
3,706,798	+				-1.1
3,706,798	+				+0.1
3,706,798	+				-0.5
3,706,798	+				-0.0
3,706,798	+				-0.0
3,706,798	+				-0.2
3,706,798	+				-0.3
3,706,798	+				-0.9
3,706,798	+				+1.7
3,706,798	+				-0.4
3,706,798	+				-0.7
3,706,798	+				+0.2
3,706,798	+				-1.1
3,706,798	+				-1.1
3,706,798	+				+2.0
3,706,798	+				-0.1
3,706,799	-				+0.6
3,706,799	-				+0.1
3,706,799	-				-1.1
3,706,799	-				-0.0
3,706,799	-				-0.5
3,706,799	-				-1.8
3,706,799	-				-0.3
3,706,799	-				+0.2
3,706,799	-				+1.1
3,706,799	-				-1.0
3,706,799	-				+0.2
3,706,799	-				-1.3
3,706,799	-				-0.3
3,706,799	-				-0.6
3,706,799	-				+0.1
3,706,799	-				+0.4
3,706,799	-				-0.0
3,706,805	+				-1.4
3,706,805	+				-0.3
3,706,805	+				+2.0
3,706,805	+				-0.2
3,706,805	+				-1.1
3,706,805	+				-1.1
3,706,805	+				+1.0
3,706,805	+				-0.8
3,706,805	+				-0.3
3,706,805	+				-1.8
3,706,805	+				-0.8
3,706,805	+				-0.1
3,706,805	+				+0.4
3,706,805	+				+0.2
3,706,805	+				+1.0
3,706,805	+				-0.7
3,706,805	+				-0.5
3,706,805	+				-0.2
3,706,805	+				+0.7
3,706,805	+				-1.5
3,706,806	-				+0.2
3,706,806	-				+0.3
3,706,806	-				+0.9
3,706,806	-				-0.2
3,706,806	-				-1.5
3,706,806	-				-1.0
3,706,806	-				+0.2
3,706,806	-				-0.5
3,706,806	-				-1.4
3,706,806	-				+1.0
3,706,868	+		LRK53_RS16860	0.49	+1.0
3,706,868	+		LRK53_RS16860	0.49	+0.9
3,706,869	-		LRK53_RS16860	0.50	-0.1
3,706,937	+				-1.3
3,706,937	+				-0.0
3,706,938	-				-1.3
3,707,116	+		LRK53_RS16865	0.12	-1.0
3,707,116	+		LRK53_RS16865	0.12	-1.0
3,707,116	+		LRK53_RS16865	0.12	+0.2
3,707,116	+		LRK53_RS16865	0.12	+0.7
3,707,116	+		LRK53_RS16865	0.12	+1.8
3,707,116	+		LRK53_RS16865	0.12	-0.8
3,707,116	+		LRK53_RS16865	0.12	-0.9
3,707,116	+		LRK53_RS16865	0.12	-0.6
3,707,116	+		LRK53_RS16865	0.12	+0.4
3,707,117	-		LRK53_RS16865	0.12	+0.5
3,707,117	-		LRK53_RS16865	0.12	+1.4
3,707,239	+		LRK53_RS16865	0.21	-1.4
3,707,239	+		LRK53_RS16865	0.21	-0.0
3,707,239	+		LRK53_RS16865	0.21	+0.2
3,707,239	+		LRK53_RS16865	0.21	+0.9
3,707,239	+		LRK53_RS16865	0.21	-2.8
3,707,239	+		LRK53_RS16865	0.21	-1.3
3,707,239	+		LRK53_RS16865	0.21	-1.7
3,707,240	-		LRK53_RS16865	0.21	+0.4
3,707,240	-		LRK53_RS16865	0.21	+1.6
3,707,240	-		LRK53_RS16865	0.21	+0.1
3,707,240	-		LRK53_RS16865	0.21	-1.3
3,707,240	-		LRK53_RS16865	0.21	-0.8
3,707,240	-		LRK53_RS16865	0.21	+1.8
3,707,248	+		LRK53_RS16865	0.22	+0.1
3,707,248	+		LRK53_RS16865	0.22	-0.3
3,707,248	+		LRK53_RS16865	0.22	-0.3
3,707,248	+		LRK53_RS16865	0.22	-1.5
3,707,249	-		LRK53_RS16865	0.22	-2.1
3,707,249	-		LRK53_RS16865	0.22	-2.3
3,707,249	-		LRK53_RS16865	0.22	-0.5
3,707,249	-		LRK53_RS16865	0.22	+1.0
3,707,410	+		LRK53_RS16865	0.34	+0.2
3,707,410	+		LRK53_RS16865	0.34	-1.9
3,707,411	-		LRK53_RS16865	0.34	-1.2
3,707,411	-		LRK53_RS16865	0.34	+1.3
3,707,411	-		LRK53_RS16865	0.34	+0.4
3,707,411	-		LRK53_RS16865	0.34	+0.7
3,707,411	-		LRK53_RS16865	0.34	-1.4
3,707,476	+		LRK53_RS16865	0.39	-0.0
3,707,476	+		LRK53_RS16865	0.39	-2.4
3,707,477	-		LRK53_RS16865	0.39	+0.2
3,707,548	+		LRK53_RS16865	0.44	-1.7
3,707,548	+		LRK53_RS16865	0.44	-0.7
3,707,549	-		LRK53_RS16865	0.44	+0.2
3,707,549	-		LRK53_RS16865	0.44	+0.2
3,707,549	-		LRK53_RS16865	0.44	+1.3
3,707,549	-		LRK53_RS16865	0.44	+1.0
3,707,651	-		LRK53_RS16865	0.52	-0.6
3,707,752	+		LRK53_RS16865	0.59	-0.6
3,707,752	+		LRK53_RS16865	0.59	+0.7
3,707,752	+		LRK53_RS16865	0.59	-0.5
3,707,752	+		LRK53_RS16865	0.59	-2.2
3,707,752	+		LRK53_RS16865	0.59	-1.7
3,707,752	+		LRK53_RS16865	0.59	+0.3
3,707,753	-		LRK53_RS16865	0.59	-1.6
3,707,753	-		LRK53_RS16865	0.59	+0.2
3,707,753	-		LRK53_RS16865	0.59	-2.5
3,707,753	-		LRK53_RS16865	0.59	+0.2
3,707,753	-		LRK53_RS16865	0.59	-0.8
3,707,753	-		LRK53_RS16865	0.59	-2.1
3,707,753	-		LRK53_RS16865	0.59	-0.8
3,707,890	+		LRK53_RS16865	0.69	-0.6
3,707,890	+		LRK53_RS16865	0.69	-0.9
3,707,891	-		LRK53_RS16865	0.70	+1.4
3,708,118	+		LRK53_RS16865	0.86	-0.8
3,708,118	+		LRK53_RS16865	0.86	-0.2
3,708,118	+		LRK53_RS16865	0.86	+1.0
3,708,119	-		LRK53_RS16865	0.87	-0.0
3,708,119	-		LRK53_RS16865	0.87	-1.7
3,708,345	+				-2.2
3,708,345	+				-2.0
3,708,346	-				-0.3
3,708,346	-				+2.0
3,708,346	-				-0.2
3,708,757	-		LRK53_RS16870	0.82	-0.8
3,708,892	+				-1.7
3,708,892	+				-0.8
3,708,893	-				+0.7
3,708,893	-				-0.8
3,708,893	-				+0.4
3,708,893	-				-0.7
3,708,893	-				+2.4
3,708,893	-				+2.2
3,708,893	-				+0.1
3,708,893	-				+1.0
3,708,944	+				-1.1
3,708,944	+				-1.2
3,708,944	+				-3.3
3,708,945	-				-2.0
3,708,945	-				-2.0
3,708,946	+				-0.3
3,708,946	+				-0.9
3,708,946	+				+1.4
3,708,946	+				+0.4
3,708,946	+				-1.0
3,708,946	+				-0.3
3,708,946	+				-0.1
3,708,946	+				+0.8
3,708,946	+				+1.0
3,708,946	+				+0.2
3,708,946	+				-1.3
3,708,946	+				-1.0
3,708,947	-				+0.4
3,708,947	-				+0.7