Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16505

Experiment: biofilm; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Aluminum chloride 1mM
3,635,604	-		LRK53_RS16495	0.90	-0.6
3,635,604	-		LRK53_RS16495	0.90	+0.4
3,635,604	-		LRK53_RS16495	0.90	-0.6
3,635,604	-		LRK53_RS16495	0.90	-0.6
3,635,604	-		LRK53_RS16495	0.90	-0.5
3,635,604	-		LRK53_RS16495	0.90	+0.2
3,635,604	-		LRK53_RS16495	0.90	-0.9
3,635,726	+				-1.0
3,635,726	+				-0.8
3,635,726	+				-1.1
3,635,727	-				-0.7
3,635,727	-				-0.7
3,635,727	-				+0.2
3,635,727	-				+0.2
3,635,727	-				-0.5
3,635,772	+				+0.8
3,635,772	+				-0.2
3,635,772	+				-2.4
3,635,772	+				+1.0
3,635,772	+				+0.5
3,635,772	+				-1.1
3,635,773	-				+1.6
3,635,773	-				+0.7
3,635,773	-				+0.3
3,635,773	-				+1.4
3,635,773	-				+0.7
3,635,773	-				+2.4
3,635,773	-				-1.1
3,635,773	-				+0.3
3,635,773	-				-1.3
3,635,773	-				-0.0
3,635,773	-				+0.8
3,635,773	-				+0.5
3,635,773	-				-1.0
3,635,773	-				+2.3
3,635,773	-				-2.0
3,635,773	-				-0.6
3,635,773	-				+0.6
3,635,773	-				+1.2
3,635,773	-				+0.3
3,635,774	+				-0.3
3,635,775	-				-0.5
3,635,775	-				-0.2
3,635,775	-				-1.3
3,635,775	-				-0.6
3,635,775	-				-0.3
3,635,775	-				-2.0
3,635,775	-				+0.5
3,635,775	-				-0.2
3,635,775	-				-1.0
3,635,775	-				-2.7
3,635,775	-				-1.5
3,635,775	-				-1.9
3,635,775	-				-0.2
3,635,775	-				-0.2
3,635,775	-				-0.6
3,635,812	+				+0.4
3,635,812	+				+1.2
3,635,812	+				+0.9
3,635,812	+				-1.3
3,635,812	+				+0.3
3,635,812	+				+0.1
3,635,812	+				-1.8
3,635,813	-				-1.5
3,635,813	-				-1.5
3,635,898	-				-0.2
3,636,002	+		LRK53_RS16500	0.28	-0.4
3,636,002	+		LRK53_RS16500	0.28	-0.2
3,636,002	+		LRK53_RS16500	0.28	-0.1
3,636,002	+		LRK53_RS16500	0.28	-1.8
3,636,002	+		LRK53_RS16500	0.28	-1.9
3,636,002	+		LRK53_RS16500	0.28	-0.3
3,636,003	-		LRK53_RS16500	0.28	-0.7
3,636,003	-		LRK53_RS16500	0.28	+0.5
3,636,003	-		LRK53_RS16500	0.28	+1.7
3,636,003	-		LRK53_RS16500	0.28	+1.2
3,636,003	-		LRK53_RS16500	0.28	-0.4
3,636,003	-		LRK53_RS16500	0.28	+1.8
3,636,003	-		LRK53_RS16500	0.28	-0.9
3,636,003	-		LRK53_RS16500	0.28	+0.2
3,636,003	-		LRK53_RS16500	0.28	+0.9
3,636,003	-		LRK53_RS16500	0.28	-0.3
3,636,003	-		LRK53_RS16500	0.28	+1.0
3,636,003	-		LRK53_RS16500	0.28	-0.3
3,636,071	+		LRK53_RS16500	0.40	-0.4
3,636,071	+		LRK53_RS16500	0.40	-0.3
3,636,072	-		LRK53_RS16500	0.40	-0.7
3,636,072	-		LRK53_RS16500	0.40	+1.7
3,636,072	-		LRK53_RS16500	0.40	-1.6
3,636,072	-		LRK53_RS16500	0.40	+0.6
3,636,072	-		LRK53_RS16500	0.40	-0.6
3,636,072	-		LRK53_RS16500	0.40	-1.3
3,636,072	-		LRK53_RS16500	0.40	-1.9
3,636,072	-		LRK53_RS16500	0.40	-0.2
3,636,072	-		LRK53_RS16500	0.40	-1.1
3,636,164	+		LRK53_RS16500	0.57	+0.2
3,636,165	-		LRK53_RS16500	0.57	-0.2
3,636,165	-		LRK53_RS16500	0.57	-0.5
3,636,266	+		LRK53_RS16500	0.75	-0.1
3,636,267	-		LRK53_RS16500	0.75	-1.7
3,636,339	+		LRK53_RS16500	0.88	-0.7
3,636,340	-		LRK53_RS16500	0.88	-1.8
3,636,340	-		LRK53_RS16500	0.88	+1.4
3,636,432	+				-1.6
3,636,432	+				-0.3
3,636,563	+				-1.6
3,636,564	-				-0.4
3,636,566	-				+1.6
3,636,566	-				-2.2
3,636,566	-				-0.6
3,636,697	+		LRK53_RS16505	0.12	+1.6
3,636,697	+		LRK53_RS16505	0.12	-0.8
3,636,697	+		LRK53_RS16505	0.12	-0.2
3,636,697	+		LRK53_RS16505	0.12	+0.1
3,636,697	+		LRK53_RS16505	0.12	-0.2
3,636,698	-		LRK53_RS16505	0.12	+1.0
3,636,698	-		LRK53_RS16505	0.12	+0.2
3,636,698	-		LRK53_RS16505	0.12	-1.2
3,636,698	-		LRK53_RS16505	0.12	-0.7
3,636,698	-		LRK53_RS16505	0.12	-3.1
3,636,698	-		LRK53_RS16505	0.12	-0.9
3,636,698	-		LRK53_RS16505	0.12	-0.8
3,636,698	-		LRK53_RS16505	0.12	-1.9
3,636,698	-		LRK53_RS16505	0.12	-0.1
3,636,739	+		LRK53_RS16505	0.17	+0.0
3,636,739	+		LRK53_RS16505	0.17	-0.3
3,636,739	+		LRK53_RS16505	0.17	-0.2
3,636,739	+		LRK53_RS16505	0.17	-0.1
3,636,739	+		LRK53_RS16505	0.17	-1.5
3,637,096	+		LRK53_RS16505	0.60	+0.2
3,637,096	+		LRK53_RS16505	0.60	-1.5
3,637,096	+		LRK53_RS16505	0.60	-0.8
3,637,096	+		LRK53_RS16505	0.60	-1.3
3,637,096	+		LRK53_RS16505	0.60	-1.0
3,637,097	-		LRK53_RS16505	0.60	-0.2
3,637,097	-		LRK53_RS16505	0.60	-2.1
3,637,097	-		LRK53_RS16505	0.60	-0.9
3,637,097	-		LRK53_RS16505	0.60	+0.8
3,637,097	-		LRK53_RS16505	0.60	+0.2
3,637,097	-		LRK53_RS16505	0.60	-0.6
3,637,097	-		LRK53_RS16505	0.60	+0.6
3,637,097	-		LRK53_RS16505	0.60	-1.0
3,637,117	+		LRK53_RS16505	0.63	-1.2
3,637,117	+		LRK53_RS16505	0.63	+0.8
3,637,117	+		LRK53_RS16505	0.63	-0.2
3,637,117	+		LRK53_RS16505	0.63	-0.3
3,637,118	-		LRK53_RS16505	0.63	-1.2
3,637,118	-		LRK53_RS16505	0.63	+1.2
3,637,369	+				-0.2
3,637,369	+				-1.0
3,637,369	+				+0.6
3,637,436	+				+1.0
3,637,436	+				+0.7
3,637,437	-				+0.3
3,637,437	-				-1.1
3,637,437	-				+1.0
3,637,451	+				+1.4
3,637,451	+				-0.3
3,637,452	-				+1.0
3,637,452	-				+1.1
3,637,452	-				-1.3
3,637,452	-				-0.6
3,637,479	+				-0.2
3,637,479	+				-2.0
3,637,479	+				-1.0
3,637,479	+				+1.3
3,637,479	+				-0.3
3,637,479	+				-1.2
3,637,480	-				+0.1
3,637,480	-				+1.8
3,637,480	-				-0.3
3,637,480	-				-0.4
3,637,480	-				-1.2
3,637,480	-				-0.7
3,637,930	+		LRK53_RS16510	0.84	-0.5
3,637,930	+		LRK53_RS16510	0.84	+0.2
3,637,983	+				+0.7
3,637,984	-				+0.2
3,637,984	-				-0.9
3,637,984	-				+0.2
3,637,984	-				+0.4
3,638,058	+				-0.0
3,638,058	+				+0.7
3,638,058	+				+0.4
3,638,058	+				-0.6
3,638,058	+				-0.6
3,638,058	+				-0.3
3,638,059	-				+0.6
3,638,059	-				+1.7
3,638,059	-				+0.5
3,638,059	-				+0.8
3,638,059	-				-0.5
3,638,059	-				+1.0
3,638,101	+				-0.6
3,638,101	+				-0.2
3,638,182	+		LRK53_RS16515	0.10	+1.4
3,638,182	+		LRK53_RS16515	0.10	-0.7
3,638,182	+		LRK53_RS16515	0.10	+0.2
3,638,182	+		LRK53_RS16515	0.10	-2.5
3,638,183	-		LRK53_RS16515	0.10	+0.8
3,638,183	-		LRK53_RS16515	0.10	-0.3
3,638,183	-		LRK53_RS16515	0.10	-1.5
3,638,183	-		LRK53_RS16515	0.10	-1.0
3,638,215	+		LRK53_RS16515	0.14	+0.1
3,638,215	+		LRK53_RS16515	0.14	-1.2
3,638,216	-		LRK53_RS16515	0.14	+0.4
3,638,216	-		LRK53_RS16515	0.14	+0.4
3,638,216	-		LRK53_RS16515	0.14	+1.5
3,638,216	-		LRK53_RS16515	0.14	-2.0
3,638,216	-		LRK53_RS16515	0.14	-2.0
3,638,216	-		LRK53_RS16515	0.14	+0.4
3,638,272	+		LRK53_RS16515	0.20	-1.1
3,638,272	+		LRK53_RS16515	0.20	-0.3
3,638,272	+		LRK53_RS16515	0.20	-0.1
3,638,272	+		LRK53_RS16515	0.20	-1.5
3,638,272	+		LRK53_RS16515	0.20	-0.7
3,638,272	+		LRK53_RS16515	0.20	+1.0
3,638,272	+		LRK53_RS16515	0.20	-1.9
3,638,272	+		LRK53_RS16515	0.20	+1.7
3,638,272	+		LRK53_RS16515	0.20	+0.2
3,638,272	+		LRK53_RS16515	0.20	+2.3
3,638,272	+		LRK53_RS16515	0.20	-2.0
3,638,272	+		LRK53_RS16515	0.20	-0.9
3,638,272	+		LRK53_RS16515	0.20	+0.3
3,638,272	+		LRK53_RS16515	0.20	+1.5
3,638,272	+		LRK53_RS16515	0.20	-1.6
3,638,272	+		LRK53_RS16515	0.20	+0.2
3,638,272	+		LRK53_RS16515	0.20	-1.5
3,638,272	+		LRK53_RS16515	0.20	-1.9
3,638,272	+		LRK53_RS16515	0.20	-0.9
3,638,272	+		LRK53_RS16515	0.20	+0.6
3,638,272	+		LRK53_RS16515	0.20	-0.8
3,638,272	+		LRK53_RS16515	0.20	-1.5
3,638,272	+		LRK53_RS16515	0.20	-2.8
3,638,272	+		LRK53_RS16515	0.20	-1.1
3,638,272	+		LRK53_RS16515	0.20	+0.7
3,638,272	+		LRK53_RS16515	0.20	+1.2
3,638,272	+		LRK53_RS16515	0.20	-0.7
3,638,272	+		LRK53_RS16515	0.20	+0.5
3,638,273	-		LRK53_RS16515	0.20	-2.3
3,638,273	-		LRK53_RS16515	0.20	+1.2
3,638,273	-		LRK53_RS16515	0.20	-0.5
3,638,273	-		LRK53_RS16515	0.20	-1.8
3,638,273	-		LRK53_RS16515	0.20	-1.9
3,638,273	-		LRK53_RS16515	0.20	-1.2
3,638,273	-		LRK53_RS16515	0.20	+1.2
3,638,273	-		LRK53_RS16515	0.20	-0.5
3,638,273	-		LRK53_RS16515	0.20	-0.0
3,638,273	-		LRK53_RS16515	0.20	+1.1
3,638,273	-		LRK53_RS16515	0.20	+1.1
3,638,273	-		LRK53_RS16515	0.20	-0.8
3,638,273	-		LRK53_RS16515	0.20	-0.2
3,638,273	-		LRK53_RS16515	0.20	-1.0
3,638,273	-		LRK53_RS16515	0.20	-0.2
3,638,273	-		LRK53_RS16515	0.20	-1.0
3,638,273	-		LRK53_RS16515	0.20	-2.1
3,638,273	-		LRK53_RS16515	0.20	-2.0
3,638,273	-		LRK53_RS16515	0.20	-0.7
3,638,273	-		LRK53_RS16515	0.20	+0.8
3,638,273	-		LRK53_RS16515	0.20	-1.3
3,638,273	-		LRK53_RS16515	0.20	-2.1
3,638,273	-		LRK53_RS16515	0.20	-0.4
3,638,273	-		LRK53_RS16515	0.20	+1.2
3,638,273	-		LRK53_RS16515	0.20	+0.9
3,638,273	-		LRK53_RS16515	0.20	+0.7
3,638,273	-		LRK53_RS16515	0.20	-1.4
3,638,273	-		LRK53_RS16515	0.20	-1.4
3,638,273	-		LRK53_RS16515	0.20	+0.1
3,638,273	-		LRK53_RS16515	0.20	-1.7
3,638,273	-		LRK53_RS16515	0.20	-1.5
3,638,273	-		LRK53_RS16515	0.20	-0.3
3,638,290	+		LRK53_RS16515	0.22	+0.4
3,638,290	+		LRK53_RS16515	0.22	+0.2
3,638,291	-		LRK53_RS16515	0.22	-0.8
3,638,291	-		LRK53_RS16515	0.22	-1.0
3,638,308	+		LRK53_RS16515	0.24	-0.2
3,638,308	+		LRK53_RS16515	0.24	-1.2
3,638,308	+		LRK53_RS16515	0.24	-2.2
3,638,308	+		LRK53_RS16515	0.24	+0.1
3,638,308	+		LRK53_RS16515	0.24	-0.6
3,638,308	+		LRK53_RS16515	0.24	-0.5
3,638,308	+		LRK53_RS16515	0.24	+0.6
3,638,308	+		LRK53_RS16515	0.24	+0.1
3,638,308	+		LRK53_RS16515	0.24	+0.1
3,638,309	-		LRK53_RS16515	0.24	-1.5
3,638,309	-		LRK53_RS16515	0.24	-1.8
3,638,309	-		LRK53_RS16515	0.24	-1.0
3,638,309	-		LRK53_RS16515	0.24	-1.3
3,638,374	+		LRK53_RS16515	0.31	-0.9
3,638,374	+		LRK53_RS16515	0.31	-0.6
3,638,374	+		LRK53_RS16515	0.31	-0.3
3,638,374	+		LRK53_RS16515	0.31	+0.1
3,638,374	+		LRK53_RS16515	0.31	-0.9
3,638,375	-		LRK53_RS16515	0.31	+0.2
3,638,375	-		LRK53_RS16515	0.31	-0.5
3,638,375	-		LRK53_RS16515	0.31	+1.0
3,638,375	-		LRK53_RS16515	0.31	+0.1
3,638,393	-		LRK53_RS16515	0.33	+0.3