Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16345

Experiment: biofilm; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Aluminum chloride 1mM
3,597,518	-				-0.1
3,597,802	+		LRK53_RS16340	0.40	+0.2
3,597,802	+		LRK53_RS16340	0.40	-0.1
3,597,821	+		LRK53_RS16340	0.43	+0.5
3,597,821	+		LRK53_RS16340	0.43	+0.6
3,597,821	+		LRK53_RS16340	0.43	-0.5
3,597,821	+		LRK53_RS16340	0.43	+0.4
3,597,875	+		LRK53_RS16340	0.52	+0.8
3,597,935	+		LRK53_RS16340	0.61	-0.9
3,597,935	+		LRK53_RS16340	0.61	+0.6
3,597,935	+		LRK53_RS16340	0.61	-0.2
3,597,935	+		LRK53_RS16340	0.61	-1.4
3,597,935	+		LRK53_RS16340	0.61	-1.3
3,597,935	+		LRK53_RS16340	0.61	+0.1
3,597,935	+		LRK53_RS16340	0.61	-2.4
3,597,935	+		LRK53_RS16340	0.61	+4.3
3,597,935	+		LRK53_RS16340	0.61	-0.5
3,597,936	-		LRK53_RS16340	0.61	-0.5
3,597,936	-		LRK53_RS16340	0.61	-1.0
3,597,936	-		LRK53_RS16340	0.61	+0.3
3,597,936	-		LRK53_RS16340	0.61	-0.2
3,597,936	-		LRK53_RS16340	0.61	+1.4
3,597,936	-		LRK53_RS16340	0.61	+1.4
3,597,936	-		LRK53_RS16340	0.61	+0.6
3,597,936	-		LRK53_RS16340	0.61	-0.9
3,597,936	-		LRK53_RS16340	0.61	-0.2
3,597,936	-		LRK53_RS16340	0.61	-0.2
3,597,936	-		LRK53_RS16340	0.61	-0.3
3,597,936	-		LRK53_RS16340	0.61	-1.4
3,597,936	-		LRK53_RS16340	0.61	-1.7
3,597,937	+		LRK53_RS16340	0.61	-0.7
3,597,937	+		LRK53_RS16340	0.61	+0.4
3,597,938	-		LRK53_RS16340	0.62	-2.3
3,598,119	-				-0.6
3,598,192	+				+1.7
3,598,192	+				-1.8
3,598,193	-				-1.2
3,598,193	-				+1.0
3,598,193	-				+0.6
3,598,193	-				-0.0
3,598,193	-				-0.0
3,598,201	+				+0.7
3,598,333	-		LRK53_RS16345	0.46	-1.4
3,598,333	-		LRK53_RS16345	0.46	-2.4
3,598,333	-		LRK53_RS16345	0.46	-1.3
3,598,333	-		LRK53_RS16345	0.46	-0.0
3,598,488	+				-2.3
3,598,488	+				-1.0
3,598,488	+				-0.0
3,598,488	+				+0.2
3,598,488	+				-0.2
3,598,488	+				-0.5
3,598,489	-				-0.2
3,598,489	-				-1.2
3,598,489	-				+0.4
3,598,489	-				+0.8
3,598,489	-				+1.4
3,598,489	-				+0.2
3,598,489	-				+0.2
3,598,489	-				-0.9
3,598,489	-				+0.2
3,598,489	-				-2.4
3,598,489	-				+0.1
3,598,514	+				-1.0
3,598,514	+				-0.4
3,598,515	-				-0.0
3,598,515	-				+2.1
3,598,515	-				+0.7
3,598,550	+				+0.4
3,598,550	+				-0.0
3,598,577	+				+0.1
3,598,577	+				-0.2
3,598,577	+				+0.4
3,598,577	+				-0.4
3,598,588	+				-0.2
3,598,588	+				-1.4
3,598,622	+				-2.3
3,598,622	+				-0.3
3,598,622	+				-0.0
3,598,623	-				-1.2
3,598,623	-				-1.3
3,598,623	-				-0.6
3,598,669	+				-0.9
3,598,669	+				-0.5
3,598,669	+				+1.0
3,598,669	+				-1.3
3,598,670	-				-1.4
3,598,670	-				+0.2
3,598,670	-				+0.5
3,598,670	-				+0.4
3,598,670	-				+1.6
3,598,670	-				+0.1
3,598,670	-				+0.2
3,598,670	-				-0.0
3,598,670	-				-0.6
3,598,670	-				+3.0
3,598,688	+				-0.3
3,598,688	+				+0.4
3,598,688	+				-1.8
3,598,753	+				+0.1
3,598,753	+				+1.4
3,598,753	+				-3.5
3,598,754	-				-0.8
3,598,754	-				-1.5
3,598,754	-				-1.0
3,598,754	-				+0.4
3,598,754	-				-1.2
3,598,754	-				-0.8
3,598,754	-				+0.2
3,598,790	+				+0.3
3,598,791	-				-0.6
3,598,859	+		LRK53_RS16350	0.11	-0.4
3,598,859	+		LRK53_RS16350	0.11	+0.3
3,598,859	+		LRK53_RS16350	0.11	-0.0
3,598,859	+		LRK53_RS16350	0.11	+0.4
3,598,859	+		LRK53_RS16350	0.11	-2.6
3,598,859	+		LRK53_RS16350	0.11	-1.7
3,598,859	+		LRK53_RS16350	0.11	-2.4
3,598,859	+		LRK53_RS16350	0.11	-2.3
3,598,860	-		LRK53_RS16350	0.11	+0.1
3,598,860	-		LRK53_RS16350	0.11	+0.2
3,598,860	-		LRK53_RS16350	0.11	+0.4
3,598,860	-		LRK53_RS16350	0.11	-1.6
3,598,860	-		LRK53_RS16350	0.11	-0.8
3,598,860	-		LRK53_RS16350	0.11	+1.2
3,598,860	-		LRK53_RS16350	0.11	+1.1
3,598,860	-		LRK53_RS16350	0.11	-0.9
3,598,860	-		LRK53_RS16350	0.11	-1.1
3,598,860	-		LRK53_RS16350	0.11	+0.8
3,598,867	+		LRK53_RS16350	0.12	+0.4
3,598,867	+		LRK53_RS16350	0.12	-1.0
3,598,867	+		LRK53_RS16350	0.12	-0.4
3,598,867	+		LRK53_RS16350	0.12	-2.9
3,598,867	+		LRK53_RS16350	0.12	-0.3
3,598,867	+		LRK53_RS16350	0.12	-0.6
3,598,868	-		LRK53_RS16350	0.12	-0.3
3,598,868	-		LRK53_RS16350	0.12	-0.8
3,598,868	-		LRK53_RS16350	0.12	-1.6
3,598,868	-		LRK53_RS16350	0.12	+0.2
3,598,868	-		LRK53_RS16350	0.12	-0.9
3,598,868	-		LRK53_RS16350	0.12	-0.0
3,598,868	-		LRK53_RS16350	0.12	+1.0
3,598,868	-		LRK53_RS16350	0.12	+0.1
3,598,868	-		LRK53_RS16350	0.12	-1.1
3,598,868	-		LRK53_RS16350	0.12	-1.0
3,598,902	+		LRK53_RS16350	0.15	-1.8
3,598,902	+		LRK53_RS16350	0.15	-1.6
3,598,903	-		LRK53_RS16350	0.15	+0.5
3,598,903	-		LRK53_RS16350	0.15	+0.3
3,598,903	-		LRK53_RS16350	0.15	-0.5
3,598,907	+		LRK53_RS16350	0.15	+0.5
3,598,908	-		LRK53_RS16350	0.15	-0.5
3,598,908	-		LRK53_RS16350	0.15	-0.5
3,598,986	+		LRK53_RS16350	0.21	+0.4
3,598,986	+		LRK53_RS16350	0.21	-0.5
3,598,986	+		LRK53_RS16350	0.21	-1.2
3,598,987	-		LRK53_RS16350	0.21	-0.8
3,598,987	-		LRK53_RS16350	0.21	-2.5
3,598,987	-		LRK53_RS16350	0.21	+0.5
3,599,008	+		LRK53_RS16350	0.23	-0.2
3,599,008	+		LRK53_RS16350	0.23	-0.2
3,599,008	+		LRK53_RS16350	0.23	-1.9
3,599,009	-		LRK53_RS16350	0.23	-1.2
3,599,009	-		LRK53_RS16350	0.23	+0.2
3,599,009	-		LRK53_RS16350	0.23	+0.2
3,599,087	+		LRK53_RS16350	0.29	-1.4
3,599,240	+		LRK53_RS16350	0.40	+0.4
3,599,312	+		LRK53_RS16350	0.45	+0.5
3,599,312	+		LRK53_RS16350	0.45	-2.0
3,599,313	-		LRK53_RS16350	0.46	-1.5
3,599,313	-		LRK53_RS16350	0.46	+1.4
3,599,392	+		LRK53_RS16350	0.51	-1.4
3,599,392	+		LRK53_RS16350	0.51	-2.1
3,599,392	+		LRK53_RS16350	0.51	+0.2
3,599,392	+		LRK53_RS16350	0.51	-1.1
3,599,392	+		LRK53_RS16350	0.51	-2.9
3,599,393	-		LRK53_RS16350	0.52	-0.2
3,599,406	+		LRK53_RS16350	0.53	-0.3
3,599,406	+		LRK53_RS16350	0.53	+0.9
3,599,406	+		LRK53_RS16350	0.53	-1.1
3,599,407	-		LRK53_RS16350	0.53	-0.0