Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15955

Experiment: biofilm; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Aluminum chloride 1mM
3,499,860	+		LRK53_RS15950	0.80	-0.6
3,499,860	+		LRK53_RS15950	0.80	+0.1
3,499,860	+		LRK53_RS15950	0.80	-1.1
3,499,860	+		LRK53_RS15950	0.80	-1.1
3,499,860	+		LRK53_RS15950	0.80	-0.8
3,499,860	+		LRK53_RS15950	0.80	-0.5
3,499,860	+		LRK53_RS15950	0.80	-0.3
3,499,860	+		LRK53_RS15950	0.80	-0.5
3,499,860	+		LRK53_RS15950	0.80	-0.5
3,499,860	+		LRK53_RS15950	0.80	-0.4
3,499,860	+		LRK53_RS15950	0.80	-0.8
3,499,860	+		LRK53_RS15950	0.80	-1.2
3,499,860	+		LRK53_RS15950	0.80	-0.9
3,499,860	+		LRK53_RS15950	0.80	-4.4
3,499,860	+		LRK53_RS15950	0.80	-2.0
3,499,860	+		LRK53_RS15950	0.80	-1.9
3,499,860	+		LRK53_RS15950	0.80	+1.6
3,499,861	-		LRK53_RS15950	0.80	+0.6
3,499,861	-		LRK53_RS15950	0.80	-0.3
3,499,861	-		LRK53_RS15950	0.80	+0.7
3,499,861	-		LRK53_RS15950	0.80	-3.4
3,499,861	-		LRK53_RS15950	0.80	-0.6
3,499,861	-		LRK53_RS15950	0.80	-1.5
3,499,861	-		LRK53_RS15950	0.80	-2.6
3,499,861	-		LRK53_RS15950	0.80	-0.5
3,499,974	-		LRK53_RS15950	0.87	-0.8
3,499,974	-		LRK53_RS15950	0.87	-1.0
3,500,061	+				-0.8
3,500,062	-				-0.4
3,500,062	-				+0.1
3,500,085	+				-0.2
3,500,085	+				-1.8
3,500,085	+				-1.5
3,500,085	+				-0.6
3,500,085	+				-2.8
3,500,085	+				-3.3
3,500,085	+				+0.6
3,500,086	-				-0.5
3,500,086	-				-0.8
3,500,086	-				-0.6
3,500,100	+				-1.8
3,500,100	+				-0.3
3,500,100	+				-0.9
3,500,100	+				+0.3
3,500,100	+				-0.4
3,500,100	+				-2.4
3,500,101	-				+0.5
3,500,101	-				-0.1
3,500,101	-				+0.3
3,500,101	-				-1.2
3,500,101	-				-1.0
3,500,101	-				-3.1
3,500,101	-				-1.4
3,500,103	+				-0.8
3,500,103	+				-0.1
3,500,103	+				-2.5
3,500,103	+				+1.5
3,500,103	+				+0.7
3,500,103	+				+0.0
3,500,103	+				-2.6
3,500,103	+				-1.5
3,500,103	+				-0.3
3,500,103	+				+0.3
3,500,103	+				-1.9
3,500,103	+				-1.7
3,500,103	+				-1.3
3,500,103	+				-2.8
3,500,103	+				-2.0
3,500,103	+				-1.6
3,500,103	+				-0.3
3,500,103	+				-1.5
3,500,103	+				-1.3
3,500,103	+				-1.7
3,500,103	+				-0.7
3,500,103	+				-1.1
3,500,103	+				+0.1
3,500,103	+				-0.8
3,500,103	+				-1.3
3,500,103	+				-0.9
3,500,104	-				-0.8
3,500,104	-				-1.5
3,500,104	-				-0.3
3,500,104	-				+0.9
3,500,104	-				+1.5
3,500,104	-				-1.7
3,500,104	-				+0.0
3,500,104	-				-0.2
3,500,104	-				+0.3
3,500,104	-				-1.5
3,500,104	-				+1.1
3,500,104	-				-0.9
3,500,104	-				-2.3
3,500,104	-				+0.6
3,500,104	-				+0.3
3,500,104	-				+0.1
3,500,104	-				-0.3
3,500,104	-				-0.9
3,500,104	-				-0.4
3,500,104	-				+0.2
3,500,104	-				+0.6
3,500,104	-				-0.7
3,500,104	-				+1.1
3,500,104	-				-0.2
3,500,104	-				+0.0
3,500,104	-				-0.4
3,500,104	-				-3.1
3,500,104	-				-0.7
3,500,112	+				-0.9
3,500,112	+				-0.3
3,500,112	+				+0.2
3,500,112	+				-1.3
3,500,112	+				-0.2
3,500,112	+				+0.3
3,500,112	+				-0.9
3,500,112	+				+0.6
3,500,112	+				-1.3
3,500,112	+				-2.6
3,500,112	+				-1.4
3,500,112	+				-2.8
3,500,112	+				+1.0
3,500,112	+				-0.6
3,500,112	+				-0.5
3,500,112	+				+1.1
3,500,112	+				-2.1
3,500,112	+				-1.4
3,500,112	+				-1.1
3,500,112	+				-0.5
3,500,112	+				-0.1
3,500,112	+				-0.6
3,500,112	+				-0.4
3,500,113	-				-0.8
3,500,113	-				-0.8
3,500,113	-				-0.8
3,500,113	-				-2.2
3,500,113	-				-2.3
3,500,113	-				-1.4
3,500,113	-				-0.9
3,500,113	-				+0.3
3,500,113	-				+1.3
3,500,113	-				-0.1
3,500,113	-				-1.3
3,500,113	-				-0.7
3,500,113	-				-1.2
3,500,113	-				-0.9
3,500,113	-				-0.7
3,500,113	-				-2.2
3,500,798	+		LRK53_RS15955	0.21	-0.7
3,501,210	+		LRK53_RS15955	0.67	+0.6
3,501,210	+		LRK53_RS15955	0.67	-0.8
3,501,211	-		LRK53_RS15955	0.68	-1.3
3,501,354	-		LRK53_RS15955	0.84	-1.4
3,501,354	-		LRK53_RS15955	0.84	-1.4
3,501,499	+				-0.0
3,501,499	+				-3.0
3,501,499	+				-1.1
3,501,499	+				+0.4
3,501,499	+				-1.1
3,501,499	+				-1.3
3,501,499	+				+1.1
3,501,499	+				-3.0
3,501,499	+				-0.5
3,501,499	+				-0.2
3,501,499	+				+1.2
3,501,499	+				-1.3
3,501,499	+				-0.4
3,501,499	+				-1.2
3,501,499	+				-0.9
3,501,500	-				-0.4
3,501,500	-				-0.2
3,501,500	-				-2.5
3,501,500	-				-0.8
3,501,500	-				-0.1
3,501,500	-				-1.3
3,501,500	-				+0.3
3,501,500	-				-1.4
3,501,500	-				+1.9
3,501,500	-				+0.3
3,501,500	-				-0.4
3,501,500	-				+0.8
3,501,500	-				-0.1
3,501,500	-				-0.8
3,501,582	+				-1.4
3,501,582	+				-1.8
3,501,583	-				-0.6
3,501,795	+		LRK53_RS15960	0.18	-0.2
3,501,795	+		LRK53_RS15960	0.18	+1.7
3,501,795	+		LRK53_RS15960	0.18	+1.9
3,501,795	+		LRK53_RS15960	0.18	-0.9
3,501,795	+		LRK53_RS15960	0.18	-1.0
3,501,795	+		LRK53_RS15960	0.18	+0.6
3,501,795	+		LRK53_RS15960	0.18	-1.9
3,501,795	+		LRK53_RS15960	0.18	-0.0
3,501,795	+		LRK53_RS15960	0.18	-2.1
3,501,795	+		LRK53_RS15960	0.18	-1.0
3,501,795	+		LRK53_RS15960	0.18	+0.4
3,501,795	+		LRK53_RS15960	0.18	-1.3
3,501,795	+		LRK53_RS15960	0.18	+0.2
3,501,795	+		LRK53_RS15960	0.18	-1.3
3,501,795	+		LRK53_RS15960	0.18	-1.4
3,501,795	+		LRK53_RS15960	0.18	-0.5
3,501,795	+		LRK53_RS15960	0.18	+0.8
3,501,795	+		LRK53_RS15960	0.18	+1.6
3,501,795	+		LRK53_RS15960	0.18	-0.5
3,501,795	+		LRK53_RS15960	0.18	-0.4
3,501,795	+		LRK53_RS15960	0.18	+0.5
3,501,795	+		LRK53_RS15960	0.18	+0.3
3,501,796	-		LRK53_RS15960	0.18	-1.5
3,501,796	-		LRK53_RS15960	0.18	+0.1
3,501,796	-		LRK53_RS15960	0.18	-1.1
3,501,796	-		LRK53_RS15960	0.18	-0.2
3,501,796	-		LRK53_RS15960	0.18	-0.9
3,501,796	-		LRK53_RS15960	0.18	-0.5
3,501,796	-		LRK53_RS15960	0.18	-1.4
3,501,796	-		LRK53_RS15960	0.18	-1.8
3,501,796	-		LRK53_RS15960	0.18	-0.7
3,501,796	-		LRK53_RS15960	0.18	+2.6
3,501,801	+		LRK53_RS15960	0.18	-1.9
3,501,801	+		LRK53_RS15960	0.18	+0.8
3,501,801	+		LRK53_RS15960	0.18	-1.2
3,501,801	+		LRK53_RS15960	0.18	+0.3
3,501,801	+		LRK53_RS15960	0.18	-0.8
3,501,867	+		LRK53_RS15960	0.23	-1.2
3,501,867	+		LRK53_RS15960	0.23	+1.7
3,501,867	+		LRK53_RS15960	0.23	+0.3
3,501,867	+		LRK53_RS15960	0.23	-2.0
3,501,868	-		LRK53_RS15960	0.23	+1.3
3,501,868	-		LRK53_RS15960	0.23	-1.4
3,501,868	-		LRK53_RS15960	0.23	+1.1
3,501,868	-		LRK53_RS15960	0.23	+2.1
3,501,868	-		LRK53_RS15960	0.23	-1.3
3,502,180	-		LRK53_RS15960	0.47	-1.0
3,502,180	-		LRK53_RS15960	0.47	-1.3
3,502,194	+		LRK53_RS15960	0.48	-0.9
3,502,194	+		LRK53_RS15960	0.48	+0.4
3,502,195	-		LRK53_RS15960	0.48	-1.6
3,502,195	-		LRK53_RS15960	0.48	+1.3
3,502,284	+		LRK53_RS15960	0.55	+0.3
3,502,284	+		LRK53_RS15960	0.55	+0.4
3,502,285	-		LRK53_RS15960	0.55	+0.4
3,502,285	-		LRK53_RS15960	0.55	-1.2
3,502,305	+		LRK53_RS15960	0.56	-0.7
3,502,305	+		LRK53_RS15960	0.56	-2.0
3,502,306	-		LRK53_RS15960	0.56	+0.3