Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15845

Experiment: biofilm; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Aluminum chloride 1mM
3,462,321	+		LRK53_RS15835	0.69	+0.1
3,462,321	+		LRK53_RS15835	0.69	-2.4
3,462,321	+		LRK53_RS15835	0.69	+1.4
3,462,321	+		LRK53_RS15835	0.69	-1.1
3,462,321	+		LRK53_RS15835	0.69	-0.8
3,462,321	+		LRK53_RS15835	0.69	+0.4
3,462,321	+		LRK53_RS15835	0.69	-0.4
3,462,321	+		LRK53_RS15835	0.69	-0.3
3,462,321	+		LRK53_RS15835	0.69	-0.1
3,462,322	-		LRK53_RS15835	0.69	-1.0
3,462,322	-		LRK53_RS15835	0.69	-1.2
3,462,322	-		LRK53_RS15835	0.69	+0.6
3,462,342	+		LRK53_RS15835	0.75	-0.3
3,462,342	+		LRK53_RS15835	0.75	+0.1
3,462,342	+		LRK53_RS15835	0.75	-0.8
3,462,342	+		LRK53_RS15835	0.75	+0.3
3,462,342	+		LRK53_RS15835	0.75	+1.1
3,462,342	+		LRK53_RS15835	0.75	-0.6
3,462,342	+		LRK53_RS15835	0.75	+1.6
3,462,342	+		LRK53_RS15835	0.75	+0.4
3,462,342	+		LRK53_RS15835	0.75	+0.4
3,462,343	-		LRK53_RS15835	0.75	-0.1
3,462,343	-		LRK53_RS15835	0.75	-0.4
3,462,343	-		LRK53_RS15835	0.75	+0.3
3,462,343	-		LRK53_RS15835	0.75	-1.7
3,462,343	-		LRK53_RS15835	0.75	-0.7
3,462,343	-		LRK53_RS15835	0.75	-0.0
3,462,372	+		LRK53_RS15835	0.82	+0.8
3,462,372	+		LRK53_RS15835	0.82	+0.8
3,462,481	+				+1.7
3,462,482	-				+0.4
3,462,760	+		LRK53_RS15840	0.54	+0.6
3,462,760	+		LRK53_RS15840	0.54	-0.6
3,462,760	+		LRK53_RS15840	0.54	-0.5
3,462,760	+		LRK53_RS15840	0.54	-1.3
3,462,760	+		LRK53_RS15840	0.54	-0.1
3,462,760	+		LRK53_RS15840	0.54	-0.3
3,462,760	+		LRK53_RS15840	0.54	+0.1
3,462,760	+		LRK53_RS15840	0.54	+0.8
3,462,760	+		LRK53_RS15840	0.54	-1.1
3,462,760	+		LRK53_RS15840	0.54	-0.6
3,462,760	+		LRK53_RS15840	0.54	-1.1
3,462,760	+		LRK53_RS15840	0.54	-0.4
3,462,761	-		LRK53_RS15840	0.54	+0.7
3,462,761	-		LRK53_RS15840	0.54	-0.7
3,462,761	-		LRK53_RS15840	0.54	-1.2
3,462,761	-		LRK53_RS15840	0.54	+1.3
3,462,761	-		LRK53_RS15840	0.54	+0.4
3,462,761	-		LRK53_RS15840	0.54	-0.7
3,462,761	-		LRK53_RS15840	0.54	-0.9
3,462,761	-		LRK53_RS15840	0.54	-0.8
3,462,761	-		LRK53_RS15840	0.54	+0.7
3,462,761	-		LRK53_RS15840	0.54	-0.9
3,462,761	-		LRK53_RS15840	0.54	+0.3
3,462,761	-		LRK53_RS15840	0.54	-0.6
3,462,761	-		LRK53_RS15840	0.54	+0.1
3,462,761	-		LRK53_RS15840	0.54	+0.8
3,462,761	-		LRK53_RS15840	0.54	-1.0
3,462,994	+				-0.7
3,462,994	+				+0.5
3,462,994	+				+1.6
3,462,994	+				+1.9
3,462,995	-				+0.6
3,462,995	-				-0.1
3,462,995	-				-1.3
3,462,995	-				+0.2
3,462,995	-				+0.6
3,463,019	+				+1.1
3,463,020	-				-1.9
3,463,020	-				-0.4
3,463,470	+		LRK53_RS15845	0.20	+0.3
3,463,471	-		LRK53_RS15845	0.20	-1.6
3,463,471	-		LRK53_RS15845	0.20	-3.5
3,463,629	+		LRK53_RS15845	0.27	-0.3
3,463,629	+		LRK53_RS15845	0.27	-1.6
3,463,629	+		LRK53_RS15845	0.27	-1.3
3,463,629	+		LRK53_RS15845	0.27	+0.3
3,463,629	+		LRK53_RS15845	0.27	-0.2
3,463,629	+		LRK53_RS15845	0.27	-1.4
3,463,630	-		LRK53_RS15845	0.27	-2.8
3,463,630	-		LRK53_RS15845	0.27	-0.3
3,463,630	-		LRK53_RS15845	0.27	-2.6
3,463,630	-		LRK53_RS15845	0.27	-0.4
3,463,630	-		LRK53_RS15845	0.27	-2.7
3,463,630	-		LRK53_RS15845	0.27	+0.4
3,463,630	-		LRK53_RS15845	0.27	+0.6
3,463,630	-		LRK53_RS15845	0.27	-2.0
3,463,630	-		LRK53_RS15845	0.27	-0.7
3,463,630	-		LRK53_RS15845	0.27	-2.5
3,463,630	-		LRK53_RS15845	0.27	-2.1
3,463,630	-		LRK53_RS15845	0.27	+1.9
3,463,635	+		LRK53_RS15845	0.27	-1.0
3,463,635	+		LRK53_RS15845	0.27	-2.0
3,463,635	+		LRK53_RS15845	0.27	-1.3
3,463,635	+		LRK53_RS15845	0.27	-1.8
3,463,635	+		LRK53_RS15845	0.27	-3.1
3,463,636	-		LRK53_RS15845	0.27	-1.4
3,463,636	-		LRK53_RS15845	0.27	-0.7
3,463,636	-		LRK53_RS15845	0.27	-1.8
3,463,636	-		LRK53_RS15845	0.27	-3.3
3,463,636	-		LRK53_RS15845	0.27	+1.5
3,463,857	+		LRK53_RS15845	0.36	-0.8
3,463,857	+		LRK53_RS15845	0.36	+0.3
3,463,858	-		LRK53_RS15845	0.36	+0.1
3,463,858	-		LRK53_RS15845	0.36	-1.3
3,463,947	+		LRK53_RS15845	0.40	-0.8
3,463,947	+		LRK53_RS15845	0.40	+1.0
3,463,947	+		LRK53_RS15845	0.40	-2.6
3,463,948	-		LRK53_RS15845	0.40	+0.1
3,463,948	-		LRK53_RS15845	0.40	-0.3
3,464,145	+		LRK53_RS15845	0.49	+0.6
3,464,146	-		LRK53_RS15845	0.49	+0.9
3,464,146	-		LRK53_RS15845	0.49	-1.6
3,464,415	+		LRK53_RS15845	0.60	-2.7
3,464,416	-		LRK53_RS15845	0.60	+0.1
3,464,416	-		LRK53_RS15845	0.60	-1.3
3,464,416	-		LRK53_RS15845	0.60	-0.7
3,464,416	-		LRK53_RS15845	0.60	-0.2
3,464,418	+		LRK53_RS15845	0.60	+1.7
3,464,418	+		LRK53_RS15845	0.60	-2.2
3,464,418	+		LRK53_RS15845	0.60	+1.5
3,464,418	+		LRK53_RS15845	0.60	-0.1
3,464,418	+		LRK53_RS15845	0.60	-1.0
3,464,418	+		LRK53_RS15845	0.60	-0.1
3,464,419	-		LRK53_RS15845	0.60	-0.3
3,464,419	-		LRK53_RS15845	0.60	+0.3
3,464,419	-		LRK53_RS15845	0.60	-0.7
3,464,419	-		LRK53_RS15845	0.60	-1.9
3,464,419	-		LRK53_RS15845	0.60	+0.2
3,464,493	+		LRK53_RS15845	0.63	+0.1
3,464,493	+		LRK53_RS15845	0.63	+0.5
3,464,493	+		LRK53_RS15845	0.63	-1.1
3,464,493	+		LRK53_RS15845	0.63	-2.8
3,464,493	+		LRK53_RS15845	0.63	-0.1
3,464,494	-		LRK53_RS15845	0.63	-0.1
3,464,494	-		LRK53_RS15845	0.63	-3.8
3,464,494	-		LRK53_RS15845	0.63	-1.7
3,464,494	-		LRK53_RS15845	0.63	+0.3
3,464,494	-		LRK53_RS15845	0.63	-1.9
3,464,494	-		LRK53_RS15845	0.63	-1.3
3,464,494	-		LRK53_RS15845	0.63	-1.5
3,464,494	-		LRK53_RS15845	0.63	-0.1
3,464,494	-		LRK53_RS15845	0.63	-0.3
3,464,565	+		LRK53_RS15845	0.66	-0.8
3,464,565	+		LRK53_RS15845	0.66	-0.9
3,464,565	+		LRK53_RS15845	0.66	+0.8
3,464,565	+		LRK53_RS15845	0.66	-0.4
3,464,565	+		LRK53_RS15845	0.66	+1.9
3,464,565	+		LRK53_RS15845	0.66	-3.0
3,464,565	+		LRK53_RS15845	0.66	+0.7
3,464,565	+		LRK53_RS15845	0.66	-0.5
3,464,565	+		LRK53_RS15845	0.66	-2.6
3,464,566	-		LRK53_RS15845	0.66	+0.1
3,464,566	-		LRK53_RS15845	0.66	+1.3
3,464,566	-		LRK53_RS15845	0.66	+0.7
3,464,566	-		LRK53_RS15845	0.66	-0.7
3,464,566	-		LRK53_RS15845	0.66	+0.6
3,464,566	-		LRK53_RS15845	0.66	-1.7
3,464,592	+		LRK53_RS15845	0.68	-1.4
3,464,593	-		LRK53_RS15845	0.68	-1.2
3,464,593	-		LRK53_RS15845	0.68	+1.6
3,464,593	-		LRK53_RS15845	0.68	-1.3
3,464,593	-		LRK53_RS15845	0.68	-1.3
3,464,877	+		LRK53_RS15845	0.80	-2.2
3,464,878	-		LRK53_RS15845	0.80	+1.5
3,464,878	-		LRK53_RS15845	0.80	-0.3
3,465,039	+		LRK53_RS15845	0.87	-0.2
3,465,097	-		LRK53_RS15845	0.89	-0.1
3,465,097	-		LRK53_RS15845	0.89	-1.5
3,465,174	+				+2.9
3,465,175	-				-0.6
3,465,246	+				-0.7
3,465,246	+				-1.7
3,465,246	+				-2.5
3,465,246	+				-2.6
3,465,246	+				-1.8
3,465,246	+				-0.5
3,465,247	-				+1.1
3,465,247	-				-1.5
3,465,388	-				+0.5
3,465,388	-				-0.6
3,465,388	-				+0.8
3,465,410	+				-0.6
3,465,410	+				-1.7
3,465,410	+				-1.5
3,465,410	+				-0.3
3,465,410	+				-0.8
3,465,411	-				-0.4
3,465,411	-				-1.0
3,465,411	-				+0.1
3,465,411	-				-2.1
3,465,411	-				-1.6
3,465,411	-				-1.7
3,465,411	-				-1.0
3,465,411	-				-0.8
3,465,411	-				-1.0
3,465,411	-				-0.3
3,465,411	-				+0.1
3,465,431	+				-0.3
3,465,431	+				+1.9
3,465,432	-				+1.9
3,465,432	-				+0.1
3,465,432	-				-1.0
3,465,441	+				-1.3
3,465,470	-				-0.1
3,465,480	-				-1.6
3,465,480	-				+0.1
3,465,480	-				-1.1
3,465,480	-				-1.5
3,465,480	-				+0.4
3,465,480	-				-0.6
3,465,480	-				-0.5
3,465,480	-				+1.0
3,465,480	-				-1.0
3,465,480	-				-2.3
3,465,480	-				-0.6
3,465,480	-				-0.2
3,465,480	-				-0.3
3,465,480	-				-1.3
3,465,480	-				+0.5
3,465,480	-				+0.2
3,465,488	-				-0.2