Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15605

Experiment: biofilm; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Aluminum chloride 1mM
3,420,126	+		LRK53_RS15600	0.82	+1.1
3,420,126	+		LRK53_RS15600	0.82	+0.3
3,420,126	+		LRK53_RS15600	0.82	-0.7
3,420,126	+		LRK53_RS15600	0.82	-0.0
3,420,126	+		LRK53_RS15600	0.82	+1.4
3,420,126	+		LRK53_RS15600	0.82	-0.3
3,420,126	+		LRK53_RS15600	0.82	-0.9
3,420,126	+		LRK53_RS15600	0.82	-0.5
3,420,126	+		LRK53_RS15600	0.82	+1.4
3,420,126	+		LRK53_RS15600	0.82	-1.9
3,420,127	-		LRK53_RS15600	0.82	-1.7
3,420,127	-		LRK53_RS15600	0.82	-1.4
3,420,127	-		LRK53_RS15600	0.82	-0.3
3,420,127	-		LRK53_RS15600	0.82	+0.1
3,420,127	-		LRK53_RS15600	0.82	-0.0
3,420,127	-		LRK53_RS15600	0.82	+0.1
3,420,127	-		LRK53_RS15600	0.82	+0.9
3,420,204	+		LRK53_RS15600	0.86	-0.3
3,420,204	+		LRK53_RS15600	0.86	+0.6
3,420,204	+		LRK53_RS15600	0.86	+0.1
3,420,204	+		LRK53_RS15600	0.86	+0.1
3,420,204	+		LRK53_RS15600	0.86	+0.9
3,420,204	+		LRK53_RS15600	0.86	-0.4
3,420,204	+		LRK53_RS15600	0.86	+0.6
3,420,204	+		LRK53_RS15600	0.86	-0.8
3,420,204	+		LRK53_RS15600	0.86	-1.2
3,420,204	+		LRK53_RS15600	0.86	-1.5
3,420,205	-		LRK53_RS15600	0.86	+0.5
3,420,315	+				+1.1
3,420,316	-				+0.3
3,420,316	-				-0.7
3,420,316	-				-1.6
3,420,418	-				-1.4
3,420,508	+				-1.0
3,420,508	+				-1.0
3,420,508	+				+0.3
3,420,509	-				-0.5
3,420,509	-				+0.5
3,420,509	-				+0.3
3,420,509	-				-1.5
3,420,509	-				-0.6
3,420,739	+				+2.4
3,420,739	+				-1.2
3,420,739	+				-0.9
3,420,763	+				-1.3
3,420,763	+				-0.6
3,420,763	+				+0.9
3,420,786	+				+1.1
3,420,787	-				+2.0
3,420,817	+				-0.2
3,420,817	+				-1.1
3,420,817	+				-0.1
3,420,817	+				-2.0
3,420,817	+				+0.1
3,420,817	+				+0.1
3,420,817	+				+0.3
3,420,817	+				-2.2
3,420,817	+				-1.4
3,420,818	-				-1.0
3,420,818	-				+0.9
3,420,818	-				-0.3
3,420,818	-				+0.1
3,420,818	-				-1.4
3,420,818	-				+1.6
3,420,818	-				-0.6
3,420,818	-				-0.6
3,421,028	-		LRK53_RS15605	0.52	-1.3
3,421,028	-		LRK53_RS15605	0.52	-0.3
3,421,123	+		LRK53_RS15605	0.80	-1.6
3,421,123	+		LRK53_RS15605	0.80	-1.7
3,421,165	+				-0.4
3,421,165	+				-1.1
3,421,165	+				-0.7
3,421,165	+				-0.4
3,421,165	+				+0.5
3,421,165	+				-1.4
3,421,166	-				+1.2
3,421,166	-				-0.6
3,421,166	-				-1.3
3,421,226	+				-0.1
3,421,226	+				-0.3
3,421,226	+				+0.1
3,421,226	+				+1.0
3,421,226	+				+0.8
3,421,226	+				-1.0
3,421,226	+				+1.0
3,421,226	+				-2.3
3,421,226	+				-1.4
3,421,226	+				-1.8
3,421,227	-				+0.1
3,421,227	-				-1.3
3,421,227	-				-0.4
3,421,227	-				-0.8
3,421,227	-				-2.1
3,421,323	+		LRK53_RS15610	0.16	-1.1
3,421,323	+		LRK53_RS15610	0.16	+2.6
3,421,323	+		LRK53_RS15610	0.16	-0.9
3,421,323	+		LRK53_RS15610	0.16	+0.2
3,421,323	+		LRK53_RS15610	0.16	+0.5
3,421,324	-		LRK53_RS15610	0.17	-0.8
3,421,324	-		LRK53_RS15610	0.17	-1.5
3,421,324	-		LRK53_RS15610	0.17	-0.2
3,421,324	-		LRK53_RS15610	0.17	-1.4
3,421,324	-		LRK53_RS15610	0.17	-1.9
3,421,324	-		LRK53_RS15610	0.17	-0.8
3,421,324	-		LRK53_RS15610	0.17	+2.3
3,421,374	+		LRK53_RS15610	0.29	-0.3
3,421,374	+		LRK53_RS15610	0.29	-0.3
3,421,374	+		LRK53_RS15610	0.29	+0.6
3,421,374	+		LRK53_RS15610	0.29	-2.1
3,421,374	+		LRK53_RS15610	0.29	+0.1
3,421,374	+		LRK53_RS15610	0.29	-0.6
3,421,374	+		LRK53_RS15610	0.29	-1.0
3,421,374	+		LRK53_RS15610	0.29	-0.1
3,421,374	+		LRK53_RS15610	0.29	-0.1
3,421,374	+		LRK53_RS15610	0.29	-1.6
3,421,374	+		LRK53_RS15610	0.29	+1.3
3,421,374	+		LRK53_RS15610	0.29	+0.7
3,421,374	+		LRK53_RS15610	0.29	-0.0
3,421,374	+		LRK53_RS15610	0.29	-2.3
3,421,374	+		LRK53_RS15610	0.29	+0.4
3,421,374	+		LRK53_RS15610	0.29	-0.1
3,421,374	+		LRK53_RS15610	0.29	-2.3
3,421,374	+		LRK53_RS15610	0.29	+0.9
3,421,375	-		LRK53_RS15610	0.29	+0.3
3,421,375	-		LRK53_RS15610	0.29	+0.2
3,421,375	-		LRK53_RS15610	0.29	-0.1
3,421,375	-		LRK53_RS15610	0.29	+0.4
3,421,375	-		LRK53_RS15610	0.29	+0.3
3,421,375	-		LRK53_RS15610	0.29	-0.4
3,421,375	-		LRK53_RS15610	0.29	-0.6
3,421,375	-		LRK53_RS15610	0.29	-1.8
3,421,375	-		LRK53_RS15610	0.29	+0.1
3,421,375	-		LRK53_RS15610	0.29	+1.1
3,421,375	-		LRK53_RS15610	0.29	-0.5
3,421,375	-		LRK53_RS15610	0.29	+0.1
3,421,375	-		LRK53_RS15610	0.29	+2.0
3,421,410	+		LRK53_RS15610	0.38	-1.4
3,421,410	+		LRK53_RS15610	0.38	-1.2
3,421,410	+		LRK53_RS15610	0.38	-0.1
3,421,411	-		LRK53_RS15610	0.38	-0.8
3,421,411	-		LRK53_RS15610	0.38	+0.1
3,421,411	-		LRK53_RS15610	0.38	-0.7
3,421,411	-		LRK53_RS15610	0.38	-1.7
3,421,420	+		LRK53_RS15610	0.40	-1.0
3,421,420	+		LRK53_RS15610	0.40	+0.4
3,421,491	-		LRK53_RS15610	0.58	-1.0
3,421,530	+		LRK53_RS15610	0.67	-1.3
3,421,530	+		LRK53_RS15610	0.67	-0.2
3,421,530	+		LRK53_RS15610	0.67	-2.1
3,421,558	-		LRK53_RS15610	0.74	-0.5
3,421,558	-		LRK53_RS15610	0.74	-0.3
3,421,659	+				-0.9
3,421,659	+				-0.9
3,421,659	+				+0.2
3,421,660	-				-1.0
3,421,660	-				-1.7
3,421,660	-				-0.3
3,421,660	-				-0.6
3,421,660	-				-2.3
3,421,660	-				-2.3
3,421,705	+				-0.1
3,421,786	+				-2.3
3,421,786	+				-0.7
3,421,787	-				-1.1
3,422,085	+		LRK53_RS15615	0.30	+0.1
3,422,085	+		LRK53_RS15615	0.30	-0.1
3,422,085	+		LRK53_RS15615	0.30	+0.8
3,422,085	+		LRK53_RS15615	0.30	-1.2
3,422,085	+		LRK53_RS15615	0.30	-0.4
3,422,085	+		LRK53_RS15615	0.30	-0.9
3,422,085	+		LRK53_RS15615	0.30	-0.9
3,422,085	+		LRK53_RS15615	0.30	+0.6
3,422,085	+		LRK53_RS15615	0.30	-1.2
3,422,085	+		LRK53_RS15615	0.30	+1.9
3,422,085	+		LRK53_RS15615	0.30	-0.3
3,422,085	+		LRK53_RS15615	0.30	-0.7
3,422,085	+		LRK53_RS15615	0.30	-0.1
3,422,085	+		LRK53_RS15615	0.30	-1.9
3,422,085	+		LRK53_RS15615	0.30	-0.2
3,422,085	+		LRK53_RS15615	0.30	-1.4
3,422,086	-		LRK53_RS15615	0.30	-0.9
3,422,086	-		LRK53_RS15615	0.30	-2.5
3,422,086	-		LRK53_RS15615	0.30	-1.2
3,422,086	-		LRK53_RS15615	0.30	+0.2
3,422,086	-		LRK53_RS15615	0.30	-0.7
3,422,086	-		LRK53_RS15615	0.30	-0.4
3,422,086	-		LRK53_RS15615	0.30	+1.4
3,422,086	-		LRK53_RS15615	0.30	-0.1
3,422,086	-		LRK53_RS15615	0.30	-1.7
3,422,086	-		LRK53_RS15615	0.30	-0.1
3,422,086	-		LRK53_RS15615	0.30	-0.1
3,422,086	-		LRK53_RS15615	0.30	+1.1
3,422,086	-		LRK53_RS15615	0.30	+0.1
3,422,086	-		LRK53_RS15615	0.30	+0.4
3,422,086	-		LRK53_RS15615	0.30	-0.3
3,422,086	-		LRK53_RS15615	0.30	-0.8