Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS11285

Experiment: biofilm; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Aluminum chloride 1mM
2,515,285	-		LRK53_RS11275	0.51	+1.3
2,515,285	-		LRK53_RS11275	0.51	+1.8
2,515,357	+				+0.3
2,515,357	+				-0.1
2,515,357	+				-0.2
2,515,357	+				-1.6
2,515,357	+				-1.6
2,515,464	+				-0.3
2,515,464	+				-0.0
2,515,506	+				+0.1
2,515,506	+				-0.7
2,515,506	+				-1.5
2,515,506	+				-0.3
2,515,506	+				+0.5
2,515,507	-				-1.5
2,515,507	-				-0.3
2,515,507	-				-0.2
2,515,584	+				+0.1
2,515,584	+				-0.2
2,515,584	+				-1.6
2,515,584	+				+0.1
2,515,584	+				+0.7
2,515,584	+				+0.7
2,515,585	-				-0.8
2,515,585	-				-0.9
2,515,587	+				-0.8
2,515,587	+				-0.8
2,515,587	+				-1.2
2,515,588	-				-2.4
2,515,588	-				+0.8
2,515,588	-				-2.0
2,515,614	+				+1.2
2,515,614	+				-0.1
2,515,615	-				-0.8
2,515,681	-		LRK53_RS11280	0.20	-1.5
2,515,715	+		LRK53_RS11280	0.29	-0.2
2,515,954	+				-1.3
2,515,954	+				-1.3
2,515,955	-				+0.5
2,515,962	+				-0.5
2,515,962	+				+0.3
2,515,962	+				+0.1
2,515,962	+				-1.6
2,515,962	+				-0.6
2,515,963	-				-0.7
2,515,963	-				-0.6
2,515,963	-				-1.9
2,515,963	-				-0.1
2,515,963	-				-0.2
2,515,963	-				-0.7
2,515,977	+				-0.9
2,515,977	+				-2.4
2,515,978	-				-0.3
2,515,978	-				-1.1
2,515,978	-				-0.7
2,515,978	-				-0.7
2,515,978	-				-0.5
2,516,357	+		LRK53_RS11285	0.49	-2.3
2,516,358	-		LRK53_RS11285	0.49	+0.1
2,516,358	-		LRK53_RS11285	0.49	-2.0
2,516,581	+				-3.5
2,516,582	-				+0.2
2,516,582	-				-1.9
2,516,582	-				-2.6
2,516,602	+				-2.6
2,516,602	+				-1.6
2,516,603	-				-2.4
2,516,636	-				+0.1
2,516,794	+		LRK53_RS11290	0.20	-1.7
2,516,794	+		LRK53_RS11290	0.20	+0.1
2,516,794	+		LRK53_RS11290	0.20	-1.0
2,516,794	+		LRK53_RS11290	0.20	-1.7
2,516,794	+		LRK53_RS11290	0.20	-0.5
2,516,795	-		LRK53_RS11290	0.20	-1.2
2,516,795	-		LRK53_RS11290	0.20	-3.0
2,516,883	+		LRK53_RS11290	0.27	-0.3
2,516,883	+		LRK53_RS11290	0.27	-2.5
2,516,883	+		LRK53_RS11290	0.27	+0.6
2,516,884	-		LRK53_RS11290	0.27	+0.2
2,516,956	+		LRK53_RS11290	0.33	+2.5
2,516,957	-		LRK53_RS11290	0.33	-2.0
2,516,959	+		LRK53_RS11290	0.33	-2.1
2,516,959	+		LRK53_RS11290	0.33	-0.9
2,516,959	+		LRK53_RS11290	0.33	+0.7
2,516,960	-		LRK53_RS11290	0.33	-1.2
2,516,960	-		LRK53_RS11290	0.33	-1.9
2,516,960	-		LRK53_RS11290	0.33	-1.2
2,516,960	-		LRK53_RS11290	0.33	-1.3
2,516,960	-		LRK53_RS11290	0.33	-1.1
2,516,960	-		LRK53_RS11290	0.33	+3.2
2,516,960	-		LRK53_RS11290	0.33	-1.0
2,516,983	+		LRK53_RS11290	0.35	+0.3
2,516,983	+		LRK53_RS11290	0.35	-1.2
2,516,983	+		LRK53_RS11290	0.35	+0.0
2,516,983	+		LRK53_RS11290	0.35	-1.1
2,516,983	+		LRK53_RS11290	0.35	-1.7
2,516,983	+		LRK53_RS11290	0.35	-2.5
2,516,983	+		LRK53_RS11290	0.35	+0.9
2,516,983	+		LRK53_RS11290	0.35	+0.5
2,516,983	+		LRK53_RS11290	0.35	+1.3
2,516,983	+		LRK53_RS11290	0.35	-2.2
2,516,983	+		LRK53_RS11290	0.35	-0.8
2,516,983	+		LRK53_RS11290	0.35	-0.0
2,516,984	-		LRK53_RS11290	0.35	-0.4
2,516,984	-		LRK53_RS11290	0.35	-0.2
2,516,984	-		LRK53_RS11290	0.35	-1.5
2,517,049	+		LRK53_RS11290	0.40	+1.2
2,517,049	+		LRK53_RS11290	0.40	+1.4
2,517,049	+		LRK53_RS11290	0.40	-1.5
2,517,049	+		LRK53_RS11290	0.40	+0.1
2,517,049	+		LRK53_RS11290	0.40	+0.1
2,517,049	+		LRK53_RS11290	0.40	-0.9
2,517,049	+		LRK53_RS11290	0.40	+0.1
2,517,049	+		LRK53_RS11290	0.40	-2.6
2,517,049	+		LRK53_RS11290	0.40	-2.0
2,517,050	-		LRK53_RS11290	0.40	+0.0
2,517,050	-		LRK53_RS11290	0.40	-2.5
2,517,050	-		LRK53_RS11290	0.40	-0.2
2,517,050	-		LRK53_RS11290	0.40	-0.7
2,517,050	-		LRK53_RS11290	0.40	+2.2
2,517,050	-		LRK53_RS11290	0.40	+0.5
2,517,050	-		LRK53_RS11290	0.40	-0.4
2,517,104	-		LRK53_RS11290	0.44	-0.1
2,517,104	-		LRK53_RS11290	0.44	+0.3
2,517,123	+		LRK53_RS11290	0.46	-1.2
2,517,123	+		LRK53_RS11290	0.46	-2.7
2,517,124	-		LRK53_RS11290	0.46	-0.9
2,517,124	-		LRK53_RS11290	0.46	+0.1
2,517,124	-		LRK53_RS11290	0.46	+0.1
2,517,124	-		LRK53_RS11290	0.46	-1.9
2,517,205	+		LRK53_RS11290	0.52	-1.7
2,517,205	+		LRK53_RS11290	0.52	+0.0
2,517,205	+		LRK53_RS11290	0.52	-0.2
2,517,205	+		LRK53_RS11290	0.52	+1.3
2,517,205	+		LRK53_RS11290	0.52	+0.3
2,517,205	+		LRK53_RS11290	0.52	-1.7
2,517,206	-		LRK53_RS11290	0.52	-0.6
2,517,206	-		LRK53_RS11290	0.52	+0.5
2,517,206	-		LRK53_RS11290	0.52	-1.2
2,517,206	-		LRK53_RS11290	0.52	-0.2
2,517,206	-		LRK53_RS11290	0.52	-1.4
2,517,206	-		LRK53_RS11290	0.52	-0.8
2,517,206	-		LRK53_RS11290	0.52	-0.9
2,517,259	+		LRK53_RS11290	0.56	-0.5
2,517,260	-		LRK53_RS11290	0.56	+0.8
2,517,260	-		LRK53_RS11290	0.56	-1.6
2,517,260	-		LRK53_RS11290	0.56	-0.8
2,517,260	-		LRK53_RS11290	0.56	+0.3
2,517,260	-		LRK53_RS11290	0.56	-0.3
2,517,260	-		LRK53_RS11290	0.56	+0.1
2,517,260	-		LRK53_RS11290	0.56	+0.8
2,517,260	-		LRK53_RS11290	0.56	+0.4
2,517,295	+		LRK53_RS11290	0.59	-0.0
2,517,295	+		LRK53_RS11290	0.59	-0.4
2,517,295	+		LRK53_RS11290	0.59	-1.4
2,517,295	+		LRK53_RS11290	0.59	-1.4
2,517,295	+		LRK53_RS11290	0.59	+1.3
2,517,295	+		LRK53_RS11290	0.59	-0.1
2,517,295	+		LRK53_RS11290	0.59	+1.1
2,517,296	-		LRK53_RS11290	0.59	-1.6
2,517,296	-		LRK53_RS11290	0.59	-2.4
2,517,296	-		LRK53_RS11290	0.59	+0.3
2,517,296	-		LRK53_RS11290	0.59	-0.1
2,517,296	-		LRK53_RS11290	0.59	-0.2
2,517,366	+		LRK53_RS11290	0.65	-0.6
2,517,366	+		LRK53_RS11290	0.65	-0.2
2,517,366	+		LRK53_RS11290	0.65	-0.6
2,517,366	+		LRK53_RS11290	0.65	-0.2
2,517,366	+		LRK53_RS11290	0.65	+0.1
2,517,366	+		LRK53_RS11290	0.65	-0.5
2,517,366	+		LRK53_RS11290	0.65	-0.0
2,517,366	+		LRK53_RS11290	0.65	-1.9
2,517,366	+		LRK53_RS11290	0.65	-3.1
2,517,366	+		LRK53_RS11290	0.65	+0.3
2,517,366	+		LRK53_RS11290	0.65	-2.1
2,517,366	+		LRK53_RS11290	0.65	+0.8
2,517,366	+		LRK53_RS11290	0.65	-1.4
2,517,367	-		LRK53_RS11290	0.65	+0.6
2,517,367	-		LRK53_RS11290	0.65	-2.1
2,517,367	-		LRK53_RS11290	0.65	-0.8
2,517,367	-		LRK53_RS11290	0.65	+0.9
2,517,367	-		LRK53_RS11290	0.65	-0.1
2,517,367	-		LRK53_RS11290	0.65	-1.7
2,517,367	-		LRK53_RS11290	0.65	+1.3