Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS11000

Experiment: biofilm; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Aluminum chloride 1mM
2,455,815	+		LRK53_RS10990	0.80	+1.5
2,455,815	+		LRK53_RS10990	0.80	-0.3
2,455,815	+		LRK53_RS10990	0.80	-0.5
2,455,815	+		LRK53_RS10990	0.80	+1.6
2,455,815	+		LRK53_RS10990	0.80	+0.5
2,455,815	+		LRK53_RS10990	0.80	-1.5
2,455,815	+		LRK53_RS10990	0.80	-0.5
2,455,816	-		LRK53_RS10990	0.81	-0.7
2,455,816	-		LRK53_RS10990	0.81	+1.0
2,455,852	+		LRK53_RS10990	0.84	-1.4
2,455,853	-		LRK53_RS10990	0.84	-0.0
2,455,853	-		LRK53_RS10990	0.84	+0.1
2,455,853	-		LRK53_RS10990	0.84	-1.6
2,455,884	+		LRK53_RS10990	0.86	-3.7
2,455,885	-		LRK53_RS10990	0.86	-1.3
2,455,945	+				+1.4
2,456,069	+				-0.2
2,456,070	-				-0.7
2,456,085	+				-1.1
2,456,085	+				+0.0
2,456,086	-				-3.2
2,456,118	+				-0.1
2,456,118	+				-0.7
2,456,118	+				-0.1
2,456,118	+				-2.4
2,456,118	+				+0.9
2,456,119	-				+1.8
2,456,119	-				-0.8
2,456,206	+		LRK53_RS10995	0.19	+0.4
2,456,346	+		LRK53_RS10995	0.39	+0.4
2,456,346	+		LRK53_RS10995	0.39	+0.9
2,456,346	+		LRK53_RS10995	0.39	-0.7
2,456,347	-		LRK53_RS10995	0.39	-2.9
2,456,427	+		LRK53_RS10995	0.51	-1.6
2,456,428	-		LRK53_RS10995	0.51	-2.6
2,456,490	+		LRK53_RS10995	0.60	+2.1
2,456,490	+		LRK53_RS10995	0.60	-1.5
2,456,490	+		LRK53_RS10995	0.60	+0.3
2,456,491	-		LRK53_RS10995	0.60	-1.0
2,456,491	-		LRK53_RS10995	0.60	-1.7
2,456,491	-		LRK53_RS10995	0.60	+0.6
2,456,493	-		LRK53_RS10995	0.61	-0.9
2,456,493	-		LRK53_RS10995	0.61	-1.1
2,456,501	+		LRK53_RS10995	0.62	-0.3
2,456,501	+		LRK53_RS10995	0.62	-1.0
2,456,501	+		LRK53_RS10995	0.62	+0.9
2,456,501	+		LRK53_RS10995	0.62	-1.4
2,456,501	+		LRK53_RS10995	0.62	+0.3
2,456,502	-		LRK53_RS10995	0.62	+0.3
2,456,502	-		LRK53_RS10995	0.62	-2.8
2,456,502	-		LRK53_RS10995	0.62	-0.9
2,456,889	+				-1.3
2,456,890	-				-0.1
2,456,956	+				-0.5
2,456,956	+				-2.4
2,456,957	-				-0.7
2,456,957	-				+1.2
2,456,957	-				-0.3
2,457,001	+		LRK53_RS11000	0.10	-1.8
2,457,002	-		LRK53_RS11000	0.10	-0.2
2,457,002	-		LRK53_RS11000	0.10	-0.4
2,457,002	-		LRK53_RS11000	0.10	-0.6
2,457,002	-		LRK53_RS11000	0.10	-1.5
2,457,025	+		LRK53_RS11000	0.11	-0.1
2,457,025	+		LRK53_RS11000	0.11	-0.7
2,457,025	+		LRK53_RS11000	0.11	-0.5
2,457,025	+		LRK53_RS11000	0.11	+0.5
2,457,025	+		LRK53_RS11000	0.11	+0.5
2,457,025	+		LRK53_RS11000	0.11	-0.7
2,457,025	+		LRK53_RS11000	0.11	-1.1
2,457,026	-		LRK53_RS11000	0.11	-0.3
2,457,026	-		LRK53_RS11000	0.11	+0.5
2,457,026	-		LRK53_RS11000	0.11	-1.5
2,457,026	-		LRK53_RS11000	0.11	-1.7
2,457,026	-		LRK53_RS11000	0.11	-1.2
2,457,026	-		LRK53_RS11000	0.11	+1.0
2,457,026	-		LRK53_RS11000	0.11	-0.8
2,457,052	+		LRK53_RS11000	0.13	-1.5
2,457,053	-		LRK53_RS11000	0.13	-1.8
2,457,082	+		LRK53_RS11000	0.14	-0.0
2,457,082	+		LRK53_RS11000	0.14	-1.8
2,457,082	+		LRK53_RS11000	0.14	-1.0
2,457,083	-		LRK53_RS11000	0.14	-0.1
2,457,083	-		LRK53_RS11000	0.14	-1.3
2,457,187	+		LRK53_RS11000	0.20	-0.5
2,457,187	+		LRK53_RS11000	0.20	+0.0
2,457,187	+		LRK53_RS11000	0.20	-1.0
2,457,188	-		LRK53_RS11000	0.20	-1.1
2,457,188	-		LRK53_RS11000	0.20	+0.8
2,457,188	-		LRK53_RS11000	0.20	-1.3
2,457,196	+		LRK53_RS11000	0.20	-0.8
2,457,196	+		LRK53_RS11000	0.20	-0.8
2,457,232	+		LRK53_RS11000	0.22	+0.4
2,457,390	+		LRK53_RS11000	0.30	-2.3
2,457,391	-		LRK53_RS11000	0.30	+1.3
2,457,391	-		LRK53_RS11000	0.30	-0.3
2,457,391	-		LRK53_RS11000	0.30	+0.0
2,457,391	-		LRK53_RS11000	0.30	-1.9
2,457,430	+		LRK53_RS11000	0.32	+0.0
2,457,430	+		LRK53_RS11000	0.32	-0.6
2,457,431	-		LRK53_RS11000	0.32	-1.3
2,457,439	-		LRK53_RS11000	0.32	-1.4
2,457,460	+		LRK53_RS11000	0.34	+0.8
2,457,460	+		LRK53_RS11000	0.34	-1.0
2,457,460	+		LRK53_RS11000	0.34	-1.3
2,457,460	+		LRK53_RS11000	0.34	-2.1
2,457,460	+		LRK53_RS11000	0.34	-0.7
2,457,461	-		LRK53_RS11000	0.34	+2.0
2,457,461	-		LRK53_RS11000	0.34	-0.2
2,457,511	+		LRK53_RS11000	0.36	+0.8
2,457,511	+		LRK53_RS11000	0.36	+0.5
2,457,512	-		LRK53_RS11000	0.36	-2.8
2,457,580	+		LRK53_RS11000	0.40	-1.2
2,457,580	+		LRK53_RS11000	0.40	+0.5
2,457,580	+		LRK53_RS11000	0.40	-0.6
2,457,580	+		LRK53_RS11000	0.40	-0.8
2,457,580	+		LRK53_RS11000	0.40	-0.1
2,457,580	+		LRK53_RS11000	0.40	-1.0
2,457,580	+		LRK53_RS11000	0.40	-1.9
2,457,580	+		LRK53_RS11000	0.40	-0.6
2,457,580	+		LRK53_RS11000	0.40	-0.3
2,457,580	+		LRK53_RS11000	0.40	-0.4
2,457,580	+		LRK53_RS11000	0.40	+0.9
2,457,581	-		LRK53_RS11000	0.40	-2.0
2,457,581	-		LRK53_RS11000	0.40	+0.2
2,457,581	-		LRK53_RS11000	0.40	-0.4
2,457,581	-		LRK53_RS11000	0.40	-0.1
2,457,581	-		LRK53_RS11000	0.40	-0.8
2,457,581	-		LRK53_RS11000	0.40	-0.5
2,457,581	-		LRK53_RS11000	0.40	-2.4
2,457,581	-		LRK53_RS11000	0.40	+0.0
2,457,581	-		LRK53_RS11000	0.40	-2.0
2,457,581	-		LRK53_RS11000	0.40	-1.5
2,457,769	+		LRK53_RS11000	0.49	-2.1
2,457,791	+		LRK53_RS11000	0.51	-0.7
2,457,792	-		LRK53_RS11000	0.51	-1.1
2,457,792	-		LRK53_RS11000	0.51	-0.2
2,457,907	+		LRK53_RS11000	0.56	-0.3
2,457,907	+		LRK53_RS11000	0.56	+0.1
2,457,907	+		LRK53_RS11000	0.56	-1.0
2,457,907	+		LRK53_RS11000	0.56	-0.8
2,457,908	-		LRK53_RS11000	0.57	-0.5
2,457,940	+		LRK53_RS11000	0.58	-1.1
2,457,941	-		LRK53_RS11000	0.58	-0.4
2,457,958	+		LRK53_RS11000	0.59	-0.7
2,457,958	+		LRK53_RS11000	0.59	-0.1
2,457,959	-		LRK53_RS11000	0.59	+0.9
2,457,979	+		LRK53_RS11000	0.60	-0.3
2,457,979	+		LRK53_RS11000	0.60	-0.5
2,458,153	+		LRK53_RS11000	0.69	-2.0
2,458,153	+		LRK53_RS11000	0.69	-1.8
2,458,153	+		LRK53_RS11000	0.69	-1.7
2,458,154	-		LRK53_RS11000	0.69	-0.7
2,458,213	+		LRK53_RS11000	0.72	-1.6
2,458,214	-		LRK53_RS11000	0.72	+0.0
2,458,214	-		LRK53_RS11000	0.72	-1.0
2,458,214	-		LRK53_RS11000	0.72	-2.5
2,458,214	-		LRK53_RS11000	0.72	+1.0
2,458,264	+		LRK53_RS11000	0.75	+0.4
2,458,264	+		LRK53_RS11000	0.75	-2.7
2,458,280	+		LRK53_RS11000	0.76	-1.1
2,458,280	+		LRK53_RS11000	0.76	+0.6
2,458,281	-		LRK53_RS11000	0.76	-1.4
2,458,281	-		LRK53_RS11000	0.76	+1.4
2,458,281	-		LRK53_RS11000	0.76	-0.1
2,458,531	+		LRK53_RS11000	0.88	-1.5
2,458,531	+		LRK53_RS11000	0.88	-0.8
2,458,571	+				+0.2
2,458,572	-				-0.5
2,458,662	-				-1.0
2,458,662	-				-0.9
2,458,682	-				-0.8
2,458,682	-				-2.1
2,458,753	+				-0.0
2,458,753	+				-0.6
2,458,883	-		LRK53_RS11005	0.17	-1.2
2,458,883	-		LRK53_RS11005	0.17	-1.9
2,458,883	-		LRK53_RS11005	0.17	-1.6
2,458,895	+		LRK53_RS11005	0.26	+2.2
2,458,896	-		LRK53_RS11005	0.27	+1.4
2,458,896	-		LRK53_RS11005	0.27	+0.5
2,458,997	+				+2.5
2,459,053	+				-2.3
2,459,053	+				+0.4
2,459,053	+				-1.8
2,459,053	+				-1.4
2,459,135	+				-1.2
2,459,135	+				-0.1
2,459,135	+				+0.8
2,459,135	+				+0.5
2,459,136	-				-0.1
2,459,136	-				-0.9
2,459,136	-				+0.4
2,459,136	-				-1.1
2,459,271	+				+0.3
2,459,272	-				-0.7
2,459,272	-				-0.5
2,459,310	+				-1.2
2,459,310	+				+0.2
2,459,310	+				-0.2
2,459,310	+				-1.1
2,459,311	-				-0.1
2,459,311	-				+0.5
2,459,373	+				+0.6
2,459,374	-				+1.5
2,459,395	-				-1.0
2,459,395	-				-0.9
2,459,473	-				+1.8
2,459,473	-				+0.4
2,459,643	+		LRK53_RS11010	0.14	+0.9
2,459,643	+		LRK53_RS11010	0.14	-1.4
2,459,643	+		LRK53_RS11010	0.14	-0.2
2,459,644	-		LRK53_RS11010	0.14	+0.6
2,459,667	+		LRK53_RS11010	0.15	-0.2
2,459,668	-		LRK53_RS11010	0.15	-1.0