Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS10120

Experiment: biofilm; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Aluminum chloride 1mM
2,261,428	-		LRK53_RS10115	0.36	-0.7
2,261,428	-		LRK53_RS10115	0.36	+1.5
2,261,506	+		LRK53_RS10115	0.42	+1.9
2,261,506	+		LRK53_RS10115	0.42	+2.1
2,261,507	-		LRK53_RS10115	0.42	-1.1
2,261,507	-		LRK53_RS10115	0.42	+0.1
2,261,524	+		LRK53_RS10115	0.44	+1.3
2,261,524	+		LRK53_RS10115	0.44	+0.3
2,261,544	+		LRK53_RS10115	0.45	+0.6
2,261,544	+		LRK53_RS10115	0.45	+0.3
2,261,544	+		LRK53_RS10115	0.45	+0.0
2,261,544	+		LRK53_RS10115	0.45	-1.9
2,261,544	+		LRK53_RS10115	0.45	-0.3
2,261,544	+		LRK53_RS10115	0.45	+0.6
2,261,545	-		LRK53_RS10115	0.46	-0.8
2,261,545	-		LRK53_RS10115	0.46	-0.7
2,261,545	-		LRK53_RS10115	0.46	-0.3
2,261,545	-		LRK53_RS10115	0.46	-1.1
2,261,545	-		LRK53_RS10115	0.46	-1.1
2,261,545	-		LRK53_RS10115	0.46	-1.5
2,261,545	-		LRK53_RS10115	0.46	+0.3
2,261,545	-		LRK53_RS10115	0.46	-1.5
2,261,554	+		LRK53_RS10115	0.46	-0.6
2,261,554	+		LRK53_RS10115	0.46	+0.0
2,261,554	+		LRK53_RS10115	0.46	-0.7
2,261,554	+		LRK53_RS10115	0.46	-0.7
2,261,554	+		LRK53_RS10115	0.46	-1.0
2,261,554	+		LRK53_RS10115	0.46	+0.0
2,261,555	-		LRK53_RS10115	0.46	-1.0
2,261,555	-		LRK53_RS10115	0.46	-3.0
2,261,555	-		LRK53_RS10115	0.46	-0.2
2,261,555	-		LRK53_RS10115	0.46	+1.0
2,261,555	-		LRK53_RS10115	0.46	+0.1
2,261,555	-		LRK53_RS10115	0.46	-0.2
2,261,555	-		LRK53_RS10115	0.46	-2.6
2,261,555	-		LRK53_RS10115	0.46	-1.6
2,261,555	-		LRK53_RS10115	0.46	+1.9
2,261,571	+		LRK53_RS10115	0.48	+0.4
2,261,571	+		LRK53_RS10115	0.48	+0.3
2,261,571	+		LRK53_RS10115	0.48	+0.1
2,261,571	+		LRK53_RS10115	0.48	-1.9
2,261,571	+		LRK53_RS10115	0.48	-2.6
2,261,571	+		LRK53_RS10115	0.48	-0.9
2,261,571	+		LRK53_RS10115	0.48	-0.9
2,261,577	+		LRK53_RS10115	0.48	-1.5
2,261,577	+		LRK53_RS10115	0.48	-1.3
2,261,578	-		LRK53_RS10115	0.48	+0.0
2,261,578	-		LRK53_RS10115	0.48	+0.9
2,261,578	-		LRK53_RS10115	0.48	-0.4
2,261,578	-		LRK53_RS10115	0.48	+0.4
2,261,578	-		LRK53_RS10115	0.48	+0.4
2,261,578	-		LRK53_RS10115	0.48	+0.1
2,261,578	-		LRK53_RS10115	0.48	+0.0
2,261,578	-		LRK53_RS10115	0.48	-2.6
2,261,578	-		LRK53_RS10115	0.48	-0.4
2,261,578	-		LRK53_RS10115	0.48	+0.1
2,261,578	-		LRK53_RS10115	0.48	-0.2
2,261,578	-		LRK53_RS10115	0.48	+0.0
2,261,578	-		LRK53_RS10115	0.48	-1.1
2,261,579	+		LRK53_RS10115	0.48	-0.4
2,261,579	+		LRK53_RS10115	0.48	+0.1
2,261,579	+		LRK53_RS10115	0.48	+0.5
2,261,579	+		LRK53_RS10115	0.48	-0.1
2,261,579	+		LRK53_RS10115	0.48	-0.7
2,261,579	+		LRK53_RS10115	0.48	-0.1
2,261,580	-		LRK53_RS10115	0.48	-0.7
2,261,580	-		LRK53_RS10115	0.48	-1.2
2,261,580	-		LRK53_RS10115	0.48	+0.5
2,261,809	-		LRK53_RS10115	0.67	+0.1
2,261,988	+		LRK53_RS10115	0.82	+0.1
2,261,988	+		LRK53_RS10115	0.82	-0.7
2,261,988	+		LRK53_RS10115	0.82	-0.2
2,262,002	-		LRK53_RS10115	0.83	-1.8
2,262,153	+				-1.6
2,262,154	-				-1.6
2,262,167	-				-1.6
2,262,223	+				+0.8
2,262,223	+				-0.1
2,262,223	+				-1.4
2,262,223	+				-1.5
2,262,223	+				+1.0
2,262,223	+				+1.2
2,262,223	+				-2.8
2,262,223	+				-3.0
2,262,223	+				-1.0
2,262,223	+				-1.0
2,262,223	+				-0.7
2,262,223	+				+1.3
2,262,223	+				-0.8
2,262,223	+				-0.8
2,262,223	+				-2.3
2,262,223	+				-0.1
2,262,223	+				-0.9
2,262,223	+				+0.7
2,262,223	+				-1.3
2,262,223	+				+1.2
2,262,223	+				+0.3
2,262,223	+				-1.7
2,262,223	+				+0.0
2,262,223	+				-2.8
2,262,223	+				+0.2
2,262,223	+				-0.5
2,262,223	+				-0.6
2,262,224	-				-2.4
2,262,224	-				-2.3
2,262,224	-				+0.7
2,262,224	-				-0.4
2,262,224	-				-0.6
2,262,224	-				-0.8
2,262,224	-				+0.3
2,262,224	-				-0.8
2,262,224	-				+0.2
2,262,224	-				-0.2
2,262,224	-				-2.0
2,262,224	-				-2.1
2,262,224	-				+0.4
2,262,224	-				+1.0
2,262,224	-				-2.9
2,262,224	-				+1.9
2,262,224	-				-1.3
2,262,224	-				-1.7
2,262,224	-				+1.3
2,262,224	-				-0.8
2,262,224	-				-1.6
2,262,224	-				+0.3
2,262,224	-				+0.1
2,262,224	-				-0.8
2,262,224	-				-0.7
2,262,224	-				-1.6
2,262,224	-				+0.4
2,262,227	+				-1.2
2,262,228	-				+3.6
2,262,228	-				+0.0
2,262,234	+				-1.0
2,262,234	+				-1.2
2,262,234	+				-0.6
2,262,234	+				+0.3
2,262,235	-				+0.4
2,262,235	-				-0.3
2,262,338	-				+2.0
2,262,825	+		LRK53_RS10120	0.54	-1.0
2,262,825	+		LRK53_RS10120	0.54	+0.0
2,262,954	+		LRK53_RS10120	0.67	-0.4
2,262,954	+		LRK53_RS10120	0.67	-0.7
2,262,954	+		LRK53_RS10120	0.67	-0.6
2,262,954	+		LRK53_RS10120	0.67	+0.2
2,262,954	+		LRK53_RS10120	0.67	-0.5
2,262,954	+		LRK53_RS10120	0.67	-0.4
2,262,954	+		LRK53_RS10120	0.67	-1.1
2,263,107	+		LRK53_RS10120	0.81	-1.4
2,263,107	+		LRK53_RS10120	0.81	-3.7
2,263,107	+		LRK53_RS10120	0.81	+0.8
2,263,108	-		LRK53_RS10120	0.81	-0.1
2,263,108	-		LRK53_RS10120	0.81	-0.9
2,263,108	-		LRK53_RS10120	0.81	+0.3
2,263,108	-		LRK53_RS10120	0.81	-2.1
2,263,108	-		LRK53_RS10120	0.81	-2.3
2,263,236	+				-2.1
2,263,236	+				-1.2
2,263,236	+				-0.4
2,263,236	+				+0.9
2,263,236	+				-0.5
2,263,236	+				+0.2
2,263,236	+				+0.7
2,263,236	+				-0.8
2,263,236	+				-0.9
2,263,296	+				-0.6
2,263,296	+				+0.1
2,263,296	+				+1.0
2,263,296	+				+0.3
2,263,296	+				+1.1
2,263,296	+				+0.0
2,263,296	+				-0.3
2,263,296	+				-0.8
2,263,296	+				+0.8
2,263,297	-				-0.5
2,263,297	-				-1.3
2,263,297	-				-0.5
2,263,297	-				+0.1
2,263,297	-				-1.1
2,263,297	-				+2.7
2,263,297	-				+1.4
2,263,297	-				-1.2
2,263,297	-				-0.8
2,263,297	-				-0.8
2,263,297	-				-1.7
2,263,297	-				-1.7
2,263,297	-				+0.9
2,263,297	-				-1.5
2,263,365	+				-0.1
2,263,366	-				-0.7
2,263,490	+				-1.0
2,263,491	-				+0.3
2,263,491	-				-1.8
2,263,503	+				-0.9
2,263,504	-				-1.4
2,263,504	-				-1.0
2,263,504	-				-0.2
2,263,504	-				-0.7
2,263,504	-				+0.4
2,263,504	-				-0.6
2,263,504	-				-0.8
2,263,504	-				-1.2
2,263,515	+				-1.6
2,263,515	+				-2.2
2,263,515	+				+1.6
2,263,515	+				-1.6
2,263,515	+				-1.0
2,263,515	+				-1.0
2,263,515	+				-1.3
2,263,515	+				-1.4
2,263,515	+				+1.1
2,263,515	+				-1.7
2,263,515	+				+1.0
2,263,515	+				-2.5
2,263,515	+				-1.3
2,263,515	+				-1.6
2,263,515	+				-1.0
2,263,516	-				-0.1
2,263,516	-				-0.6
2,263,516	-				+0.8
2,263,516	-				-0.9
2,263,516	-				-1.1
2,263,516	-				-2.8
2,263,516	-				-1.6
2,263,516	-				-1.3
2,263,516	-				-0.4
2,263,516	-				-2.8
2,263,516	-				+0.2
2,263,516	-				-0.7
2,263,557	-		LRK53_RS10125	0.11	-0.1
2,263,634	+		LRK53_RS10125	0.25	-1.6
2,263,635	-		LRK53_RS10125	0.25	-0.0
2,263,635	-		LRK53_RS10125	0.25	-1.6
2,263,635	-		LRK53_RS10125	0.25	-2.6
2,263,668	+		LRK53_RS10125	0.32	-2.0
2,263,668	+		LRK53_RS10125	0.32	-0.1
2,263,668	+		LRK53_RS10125	0.32	+1.0
2,263,668	+		LRK53_RS10125	0.32	+1.1
2,263,668	+		LRK53_RS10125	0.32	+1.1
2,263,668	+		LRK53_RS10125	0.32	-0.2
2,263,668	+		LRK53_RS10125	0.32	-1.1
2,263,668	+		LRK53_RS10125	0.32	+0.9
2,263,668	+		LRK53_RS10125	0.32	-0.5
2,263,668	+		LRK53_RS10125	0.32	-0.2
2,263,668	+		LRK53_RS10125	0.32	-0.9
2,263,668	+		LRK53_RS10125	0.32	-0.3
2,263,668	+		LRK53_RS10125	0.32	-1.3
2,263,668	+		LRK53_RS10125	0.32	+0.2
2,263,669	-		LRK53_RS10125	0.32	-0.5
2,263,669	-		LRK53_RS10125	0.32	+0.3
2,263,669	-		LRK53_RS10125	0.32	+0.2
2,263,669	-		LRK53_RS10125	0.32	-1.1
2,263,669	-		LRK53_RS10125	0.32	-0.9
2,263,669	-		LRK53_RS10125	0.32	-0.9
2,263,669	-		LRK53_RS10125	0.32	-1.4
2,263,687	+		LRK53_RS10125	0.35	+0.2
2,263,687	+		LRK53_RS10125	0.35	+0.2
2,263,687	+		LRK53_RS10125	0.35	+0.3
2,263,688	-		LRK53_RS10125	0.36	+0.5
2,263,688	-		LRK53_RS10125	0.36	-0.9
2,263,688	-		LRK53_RS10125	0.36	-2.0
2,263,688	-		LRK53_RS10125	0.36	-0.3
2,263,825	+		LRK53_RS10125	0.62	-0.7
2,263,825	+		LRK53_RS10125	0.62	-1.1
2,263,826	-		LRK53_RS10125	0.62	-3.6
2,263,826	-		LRK53_RS10125	0.62	+1.4
2,263,891	+		LRK53_RS10125	0.75	-0.4
2,263,892	-		LRK53_RS10125	0.75	-1.5
2,263,962	+		LRK53_RS10125	0.88	-0.6
2,263,963	-		LRK53_RS10125	0.88	-1.9
2,263,988	-				-1.0
2,264,217	+				+0.0
2,264,217	+				-1.0
2,264,217	+				-0.5
2,264,217	+				-0.4
2,264,217	+				-0.4
2,264,217	+				+0.6
2,264,217	+				-0.1
2,264,218	-				+2.1
2,264,218	-				-0.7
2,264,218	-				-0.7
2,264,218	-				-1.8
2,264,218	-				+0.6
2,264,218	-				-1.4
2,264,251	+				-1.4
2,264,252	-				+0.5
2,264,275	-				-2.5
2,264,283	+				+0.2
2,264,283	+				-2.3
2,264,284	-				-0.7