Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS06545

Experiment: biofilm; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Aluminum chloride 1mM
1,480,114	+		LRK53_RS06540	0.39	+1.1
1,480,114	+		LRK53_RS06540	0.39	-0.1
1,480,114	+		LRK53_RS06540	0.39	+0.1
1,480,114	+		LRK53_RS06540	0.39	-1.4
1,480,114	+		LRK53_RS06540	0.39	-1.8
1,480,114	+		LRK53_RS06540	0.39	-2.5
1,480,114	+		LRK53_RS06540	0.39	-0.9
1,480,114	+		LRK53_RS06540	0.39	-0.8
1,480,114	+		LRK53_RS06540	0.39	-0.4
1,480,115	-		LRK53_RS06540	0.39	+2.3
1,480,115	-		LRK53_RS06540	0.39	+1.5
1,480,115	-		LRK53_RS06540	0.39	+0.7
1,480,115	-		LRK53_RS06540	0.39	+1.0
1,480,115	-		LRK53_RS06540	0.39	-0.6
1,480,115	-		LRK53_RS06540	0.39	+0.1
1,480,115	-		LRK53_RS06540	0.39	-0.2
1,480,115	-		LRK53_RS06540	0.39	-0.2
1,480,115	-		LRK53_RS06540	0.39	-0.9
1,480,180	+		LRK53_RS06540	0.43	-1.5
1,480,180	+		LRK53_RS06540	0.43	-0.4
1,480,181	-		LRK53_RS06540	0.43	-0.7
1,480,181	-		LRK53_RS06540	0.43	-0.1
1,480,181	-		LRK53_RS06540	0.43	+0.1
1,480,181	-		LRK53_RS06540	0.43	-0.1
1,480,181	-		LRK53_RS06540	0.43	-1.0
1,480,330	+		LRK53_RS06540	0.53	+1.5
1,480,330	+		LRK53_RS06540	0.53	-1.8
1,480,331	-		LRK53_RS06540	0.53	-0.9
1,480,331	-		LRK53_RS06540	0.53	+0.7
1,480,331	-		LRK53_RS06540	0.53	+0.3
1,480,331	-		LRK53_RS06540	0.53	-0.8
1,480,331	-		LRK53_RS06540	0.53	-0.3
1,480,361	-		LRK53_RS06540	0.56	-0.4
1,480,423	+		LRK53_RS06540	0.60	-0.7
1,480,480	+		LRK53_RS06540	0.64	-0.4
1,480,481	-		LRK53_RS06540	0.64	-0.5
1,480,481	-		LRK53_RS06540	0.64	-1.0
1,480,513	+		LRK53_RS06540	0.66	-0.0
1,480,684	+		LRK53_RS06540	0.77	-1.0
1,480,684	+		LRK53_RS06540	0.77	-1.1
1,480,684	+		LRK53_RS06540	0.77	+0.7
1,480,684	+		LRK53_RS06540	0.77	-1.7
1,480,816	+		LRK53_RS06540	0.86	+1.5
1,480,816	+		LRK53_RS06540	0.86	-0.4
1,480,816	+		LRK53_RS06540	0.86	+0.6
1,480,816	+		LRK53_RS06540	0.86	+1.9
1,480,817	-		LRK53_RS06540	0.86	-1.3
1,480,817	-		LRK53_RS06540	0.86	+0.8
1,480,817	-		LRK53_RS06540	0.86	-0.5
1,480,964	+				-1.3
1,480,964	+				-1.2
1,480,964	+				-1.3
1,480,964	+				+0.3
1,480,964	+				-0.7
1,480,964	+				+4.3
1,480,964	+				-1.9
1,480,964	+				-0.7
1,480,965	-				-0.9
1,480,965	-				-1.2
1,480,965	-				-0.6
1,480,965	-				-0.1
1,480,965	-				-3.1
1,480,965	-				+0.4
1,480,965	-				-0.4
1,480,965	-				+0.3
1,480,965	-				+0.1
1,480,965	-				-0.3
1,480,965	-				+0.7
1,480,965	-				-0.6
1,480,965	-				-0.3
1,480,965	-				-1.0
1,480,965	-				-2.0
1,480,965	-				-0.9
1,480,965	-				+2.5
1,480,987	+				-0.1
1,480,987	+				-2.1
1,480,988	-				-1.4
1,480,988	-				-2.8
1,481,020	+				+1.3
1,481,020	+				-0.7
1,481,020	+				+0.6
1,481,020	+				-0.6
1,481,020	+				-1.8
1,481,021	-				-0.4
1,481,021	-				+1.3
1,481,021	-				+0.1
1,481,332	-				+1.7
1,481,587	+		LRK53_RS06545	0.13	-0.6
1,481,587	+		LRK53_RS06545	0.13	+0.4
1,481,587	+		LRK53_RS06545	0.13	-0.4
1,481,588	-		LRK53_RS06545	0.13	-0.1
1,481,969	-		LRK53_RS06545	0.23	+0.0
1,482,430	-		LRK53_RS06545	0.35	-0.4
1,482,533	-		LRK53_RS06545	0.37	-0.3
1,482,533	-		LRK53_RS06545	0.37	+0.3
1,483,294	+		LRK53_RS06545	0.57	+1.7
1,483,294	+		LRK53_RS06545	0.57	+0.4
1,483,453	-		LRK53_RS06545	0.61	-1.0
1,483,579	+		LRK53_RS06545	0.64	+0.1
1,483,717	+		LRK53_RS06545	0.67	+1.6
1,483,717	+		LRK53_RS06545	0.67	+0.9
1,483,717	+		LRK53_RS06545	0.67	-0.9
1,483,717	+		LRK53_RS06545	0.67	+0.1
1,483,717	+		LRK53_RS06545	0.67	-0.1
1,483,717	+		LRK53_RS06545	0.67	+0.1
1,483,717	+		LRK53_RS06545	0.67	+1.5
1,483,717	+		LRK53_RS06545	0.67	-1.2
1,483,717	+		LRK53_RS06545	0.67	-0.6
1,483,718	-		LRK53_RS06545	0.68	+0.1
1,483,718	-		LRK53_RS06545	0.68	+1.1
1,483,718	-		LRK53_RS06545	0.68	-1.5
1,483,718	-		LRK53_RS06545	0.68	+0.1
1,483,718	-		LRK53_RS06545	0.68	+1.3
1,483,718	-		LRK53_RS06545	0.68	-0.3
1,483,718	-		LRK53_RS06545	0.68	-1.3
1,483,883	-		LRK53_RS06545	0.72	-0.4
1,483,883	-		LRK53_RS06545	0.72	-0.1
1,483,883	-		LRK53_RS06545	0.72	-1.3
1,483,883	-		LRK53_RS06545	0.72	-0.3
1,483,883	-		LRK53_RS06545	0.72	+0.6
1,483,942	+		LRK53_RS06545	0.73	-1.1
1,483,942	+		LRK53_RS06545	0.73	+0.3
1,483,943	-		LRK53_RS06545	0.73	-0.4
1,483,943	-		LRK53_RS06545	0.73	+0.4
1,483,943	-		LRK53_RS06545	0.73	-0.6
1,484,681	-				-0.7
1,484,996	-				-1.2
1,485,070	-				-0.5
1,485,070	-				-0.2
1,485,070	-				-2.1
1,485,105	+				-0.4
1,485,105	+				-0.1
1,485,105	+				-1.7
1,485,106	-				-1.0
1,485,106	-				-0.1
1,485,106	-				-0.7
1,485,106	-				-0.3
1,485,255	+		LRK53_RS06550	0.29	-0.5
1,485,255	+		LRK53_RS06550	0.29	+1.5
1,485,255	+		LRK53_RS06550	0.29	-0.6
1,485,255	+		LRK53_RS06550	0.29	-1.1
1,485,255	+		LRK53_RS06550	0.29	-0.3
1,485,255	+		LRK53_RS06550	0.29	-1.6
1,485,255	+		LRK53_RS06550	0.29	-1.2
1,485,255	+		LRK53_RS06550	0.29	-0.3
1,485,255	+		LRK53_RS06550	0.29	+0.7
1,485,255	+		LRK53_RS06550	0.29	+0.1
1,485,256	-		LRK53_RS06550	0.29	-0.2
1,485,256	-		LRK53_RS06550	0.29	-0.9
1,485,256	-		LRK53_RS06550	0.29	+0.5
1,485,256	-		LRK53_RS06550	0.29	-1.4
1,485,256	-		LRK53_RS06550	0.29	+1.1
1,485,256	-		LRK53_RS06550	0.29	-1.9
1,485,256	-		LRK53_RS06550	0.29	-1.9
1,485,256	-		LRK53_RS06550	0.29	-3.0
1,485,256	-		LRK53_RS06550	0.29	-0.2
1,485,256	-		LRK53_RS06550	0.29	-1.3
1,485,369	+		LRK53_RS06550	0.47	-0.6
1,485,369	+		LRK53_RS06550	0.47	-2.1
1,485,369	+		LRK53_RS06550	0.47	-0.3
1,485,369	+		LRK53_RS06550	0.47	+0.1
1,485,369	+		LRK53_RS06550	0.47	-1.7
1,485,369	+		LRK53_RS06550	0.47	-0.3
1,485,369	+		LRK53_RS06550	0.47	-2.4
1,485,369	+		LRK53_RS06550	0.47	+1.1
1,485,369	+		LRK53_RS06550	0.47	-0.4
1,485,369	+		LRK53_RS06550	0.47	-0.9
1,485,369	+		LRK53_RS06550	0.47	-0.1
1,485,370	-		LRK53_RS06550	0.47	-0.3
1,485,370	-		LRK53_RS06550	0.47	+0.7
1,485,370	-		LRK53_RS06550	0.47	-1.0
1,485,370	-		LRK53_RS06550	0.47	-0.3
1,485,370	-		LRK53_RS06550	0.47	-0.7
1,485,370	-		LRK53_RS06550	0.47	-0.3