Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS06035

Experiment: biofilm; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Aluminum chloride 1mM
1,389,354	+		LRK53_RS06025	0.19	+0.5
1,389,354	+		LRK53_RS06025	0.19	-1.0
1,389,354	+		LRK53_RS06025	0.19	-1.8
1,389,354	+		LRK53_RS06025	0.19	-2.0
1,389,355	-		LRK53_RS06025	0.20	-0.1
1,389,355	-		LRK53_RS06025	0.20	+1.2
1,389,379	-		LRK53_RS06025	0.30	+0.7
1,389,379	-		LRK53_RS06025	0.30	+1.4
1,389,379	-		LRK53_RS06025	0.30	-1.3
1,389,554	+				+0.7
1,389,554	+				-0.2
1,389,555	-				+0.5
1,389,563	+				-0.7
1,389,563	+				-0.1
1,389,563	+				+0.2
1,389,563	+				-1.1
1,389,563	+				+2.3
1,389,563	+				-0.9
1,389,563	+				-0.4
1,389,563	+				-0.1
1,389,563	+				-0.3
1,389,563	+				+0.9
1,389,563	+				+0.6
1,389,563	+				-1.6
1,389,563	+				-0.5
1,389,564	-				-0.4
1,389,564	-				+1.2
1,389,564	-				-0.4
1,389,564	-				+0.2
1,389,564	-				-1.1
1,389,564	-				+0.3
1,389,564	-				-1.7
1,389,564	-				-1.7
1,389,741	+		LRK53_RS06030	0.24	+1.2
1,389,741	+		LRK53_RS06030	0.24	+0.4
1,389,741	+		LRK53_RS06030	0.24	-0.6
1,389,741	+		LRK53_RS06030	0.24	-0.6
1,389,741	+		LRK53_RS06030	0.24	-0.9
1,389,742	-		LRK53_RS06030	0.24	+2.0
1,389,742	-		LRK53_RS06030	0.24	+1.6
1,389,742	-		LRK53_RS06030	0.24	-0.5
1,389,742	-		LRK53_RS06030	0.24	-0.1
1,389,742	-		LRK53_RS06030	0.24	-1.1
1,389,742	-		LRK53_RS06030	0.24	-0.2
1,389,742	-		LRK53_RS06030	0.24	-1.9
1,389,742	-		LRK53_RS06030	0.24	-0.5
1,389,747	+		LRK53_RS06030	0.24	+1.2
1,389,747	+		LRK53_RS06030	0.24	-1.6
1,389,747	+		LRK53_RS06030	0.24	+0.3
1,389,747	+		LRK53_RS06030	0.24	+0.3
1,389,747	+		LRK53_RS06030	0.24	-0.4
1,389,747	+		LRK53_RS06030	0.24	-0.1
1,389,747	+		LRK53_RS06030	0.24	+0.3
1,389,747	+		LRK53_RS06030	0.24	-0.3
1,389,747	+		LRK53_RS06030	0.24	+0.5
1,389,747	+		LRK53_RS06030	0.24	-1.2
1,389,748	-		LRK53_RS06030	0.25	+1.0
1,389,748	-		LRK53_RS06030	0.25	-1.2
1,389,748	-		LRK53_RS06030	0.25	+1.6
1,389,748	-		LRK53_RS06030	0.25	-0.6
1,389,748	-		LRK53_RS06030	0.25	-0.0
1,389,748	-		LRK53_RS06030	0.25	+0.3
1,389,748	-		LRK53_RS06030	0.25	-0.1
1,389,748	-		LRK53_RS06030	0.25	-1.0
1,389,748	-		LRK53_RS06030	0.25	-1.8
1,389,748	-		LRK53_RS06030	0.25	+0.4
1,389,748	-		LRK53_RS06030	0.25	+0.9
1,389,748	-		LRK53_RS06030	0.25	+0.2
1,389,748	-		LRK53_RS06030	0.25	+0.7
1,389,748	-		LRK53_RS06030	0.25	+0.7
1,389,748	-		LRK53_RS06030	0.25	-1.8
1,389,748	-		LRK53_RS06030	0.25	-0.6
1,389,748	-		LRK53_RS06030	0.25	-1.1
1,389,748	-		LRK53_RS06030	0.25	+1.9
1,389,748	-		LRK53_RS06030	0.25	+1.2
1,389,900	+		LRK53_RS06030	0.45	+0.2
1,389,900	+		LRK53_RS06030	0.45	+0.3
1,389,900	+		LRK53_RS06030	0.45	-0.7
1,389,900	+		LRK53_RS06030	0.45	+0.7
1,389,900	+		LRK53_RS06030	0.45	+0.3
1,389,900	+		LRK53_RS06030	0.45	-0.9
1,389,900	+		LRK53_RS06030	0.45	+1.3
1,389,900	+		LRK53_RS06030	0.45	+2.7
1,389,900	+		LRK53_RS06030	0.45	-1.6
1,389,900	+		LRK53_RS06030	0.45	+0.7
1,389,900	+		LRK53_RS06030	0.45	+2.7
1,389,900	+		LRK53_RS06030	0.45	+1.3
1,389,900	+		LRK53_RS06030	0.45	+2.2
1,389,900	+		LRK53_RS06030	0.45	-1.2
1,389,900	+		LRK53_RS06030	0.45	-0.6
1,389,900	+		LRK53_RS06030	0.45	-1.4
1,389,900	+		LRK53_RS06030	0.45	-0.8
1,389,900	+		LRK53_RS06030	0.45	-0.9
1,389,900	+		LRK53_RS06030	0.45	+1.2
1,389,900	+		LRK53_RS06030	0.45	-1.3
1,389,900	+		LRK53_RS06030	0.45	-0.6
1,389,900	+		LRK53_RS06030	0.45	+0.0
1,389,900	+		LRK53_RS06030	0.45	-1.3
1,389,900	+		LRK53_RS06030	0.45	-1.5
1,389,900	+		LRK53_RS06030	0.45	-0.5
1,389,900	+		LRK53_RS06030	0.45	+0.2
1,389,900	+		LRK53_RS06030	0.45	-1.1
1,389,900	+		LRK53_RS06030	0.45	-0.5
1,389,900	+		LRK53_RS06030	0.45	-2.1
1,389,900	+		LRK53_RS06030	0.45	+0.4
1,389,900	+		LRK53_RS06030	0.45	+0.2
1,389,900	+		LRK53_RS06030	0.45	-0.5
1,389,900	+		LRK53_RS06030	0.45	-1.1
1,389,901	-		LRK53_RS06030	0.46	-1.6
1,389,901	-		LRK53_RS06030	0.46	+0.2
1,389,901	-		LRK53_RS06030	0.46	-0.8
1,389,901	-		LRK53_RS06030	0.46	-1.3
1,389,901	-		LRK53_RS06030	0.46	-0.2
1,389,901	-		LRK53_RS06030	0.46	+0.3
1,389,901	-		LRK53_RS06030	0.46	-0.7
1,389,901	-		LRK53_RS06030	0.46	-0.6
1,389,901	-		LRK53_RS06030	0.46	-2.3
1,389,901	-		LRK53_RS06030	0.46	+0.2
1,389,901	-		LRK53_RS06030	0.46	-1.1
1,389,901	-		LRK53_RS06030	0.46	-1.0
1,389,901	-		LRK53_RS06030	0.46	-0.5
1,389,901	-		LRK53_RS06030	0.46	-1.8
1,389,901	-		LRK53_RS06030	0.46	-0.3
1,389,901	-		LRK53_RS06030	0.46	-0.8
1,389,901	-		LRK53_RS06030	0.46	+0.7
1,389,901	-		LRK53_RS06030	0.46	-2.7
1,389,901	-		LRK53_RS06030	0.46	+1.7
1,389,901	-		LRK53_RS06030	0.46	-0.5
1,389,901	-		LRK53_RS06030	0.46	+0.2
1,389,901	-		LRK53_RS06030	0.46	-0.4
1,389,901	-		LRK53_RS06030	0.46	-0.4
1,389,901	-		LRK53_RS06030	0.46	+1.1
1,389,901	-		LRK53_RS06030	0.46	+1.3
1,389,901	-		LRK53_RS06030	0.46	-0.2
1,389,901	-		LRK53_RS06030	0.46	-0.1
1,389,992	+		LRK53_RS06030	0.58	-1.1
1,389,992	+		LRK53_RS06030	0.58	+0.2
1,389,992	+		LRK53_RS06030	0.58	-0.1
1,389,993	-		LRK53_RS06030	0.58	-0.1
1,389,993	-		LRK53_RS06030	0.58	-1.7
1,389,993	-		LRK53_RS06030	0.58	-1.3
1,390,173	+		LRK53_RS06030	0.83	-1.9
1,390,173	+		LRK53_RS06030	0.83	-2.4
1,390,215	+		LRK53_RS06030	0.89	-0.4
1,390,215	+		LRK53_RS06030	0.89	+1.2
1,390,215	+		LRK53_RS06030	0.89	+0.2
1,390,215	+		LRK53_RS06030	0.89	+0.4
1,390,215	+		LRK53_RS06030	0.89	-1.0
1,390,215	+		LRK53_RS06030	0.89	-0.6
1,390,215	+		LRK53_RS06030	0.89	+2.7
1,390,216	-		LRK53_RS06030	0.89	+0.7
1,390,216	-		LRK53_RS06030	0.89	+0.5
1,390,216	-		LRK53_RS06030	0.89	-2.3
1,390,216	-		LRK53_RS06030	0.89	+0.5
1,390,509	+		LRK53_RS06035	0.46	-1.0
1,390,541	-		LRK53_RS06035	0.53	-0.7
1,390,541	-		LRK53_RS06035	0.53	-1.8
1,390,541	-		LRK53_RS06035	0.53	+1.9
1,390,721	+				-1.2
1,390,723	+				-1.1
1,390,724	-				-0.8
1,390,724	-				-1.9
1,390,751	+				-0.6
1,390,751	+				-1.9
1,390,751	+				-3.1
1,390,751	+				+0.2
1,390,752	-				-2.5
1,390,956	+		LRK53_RS06040	0.38	+0.2
1,390,956	+		LRK53_RS06040	0.38	-2.3
1,390,956	+		LRK53_RS06040	0.38	-1.5
1,390,956	+		LRK53_RS06040	0.38	-0.1
1,390,956	+		LRK53_RS06040	0.38	-2.3
1,390,956	+		LRK53_RS06040	0.38	-2.0
1,390,956	+		LRK53_RS06040	0.38	-1.5
1,390,956	+		LRK53_RS06040	0.38	-0.3
1,390,956	+		LRK53_RS06040	0.38	-1.5
1,390,956	+		LRK53_RS06040	0.38	+0.1
1,390,956	+		LRK53_RS06040	0.38	-0.2
1,390,956	+		LRK53_RS06040	0.38	-0.1
1,390,956	+		LRK53_RS06040	0.38	-0.1
1,390,956	+		LRK53_RS06040	0.38	-1.3
1,390,956	+		LRK53_RS06040	0.38	-0.6
1,390,956	+		LRK53_RS06040	0.38	+0.0
1,390,956	+		LRK53_RS06040	0.38	-0.9
1,390,956	+		LRK53_RS06040	0.38	+2.9
1,390,957	-		LRK53_RS06040	0.38	-0.3
1,390,957	-		LRK53_RS06040	0.38	-0.1
1,390,957	-		LRK53_RS06040	0.38	-0.1
1,390,957	-		LRK53_RS06040	0.38	-0.7
1,390,957	-		LRK53_RS06040	0.38	-1.8
1,390,957	-		LRK53_RS06040	0.38	-0.6
1,390,957	-		LRK53_RS06040	0.38	-1.3
1,390,957	-		LRK53_RS06040	0.38	+1.2
1,390,957	-		LRK53_RS06040	0.38	-2.1
1,390,957	-		LRK53_RS06040	0.38	-0.5
1,390,957	-		LRK53_RS06040	0.38	-1.0
1,390,957	-		LRK53_RS06040	0.38	-1.8
1,390,957	-		LRK53_RS06040	0.38	+1.2
1,390,957	-		LRK53_RS06040	0.38	-0.7
1,390,957	-		LRK53_RS06040	0.38	-0.4
1,390,957	-		LRK53_RS06040	0.38	-0.3
1,390,978	+		LRK53_RS06040	0.47	-1.6
1,390,978	+		LRK53_RS06040	0.47	+0.5
1,390,979	-		LRK53_RS06040	0.47	+0.3
1,391,177	+				+0.2
1,391,178	-				+0.2
1,391,183	+				-1.3
1,391,183	+				-0.5
1,391,183	+				-2.5
1,391,183	+				-2.1
1,391,183	+				+1.0
1,391,183	+				-0.7
1,391,183	+				-0.3
1,391,183	+				-0.3
1,391,184	-				-0.2
1,391,184	-				+0.7
1,391,204	+		LRK53_RS06045	0.21	-0.2
1,391,204	+		LRK53_RS06045	0.21	-0.4
1,391,204	+		LRK53_RS06045	0.21	+0.3
1,391,204	+		LRK53_RS06045	0.21	-0.2
1,391,204	+		LRK53_RS06045	0.21	-0.4
1,391,204	+		LRK53_RS06045	0.21	-0.2
1,391,205	-		LRK53_RS06045	0.21	+0.3
1,391,205	-		LRK53_RS06045	0.21	-1.5
1,391,205	-		LRK53_RS06045	0.21	-0.8
1,391,205	-		LRK53_RS06045	0.21	-2.0
1,391,205	-		LRK53_RS06045	0.21	-0.2
1,391,347	+				+2.2
1,391,347	+				+0.5
1,391,347	+				+0.4
1,391,347	+				+2.5
1,391,348	-				+0.7
1,391,526	+		LRK53_RS06050	0.12	-3.0
1,391,526	+		LRK53_RS06050	0.12	-1.6
1,391,526	+		LRK53_RS06050	0.12	-0.0
1,391,526	+		LRK53_RS06050	0.12	-0.6
1,391,527	-		LRK53_RS06050	0.12	+0.9
1,391,527	-		LRK53_RS06050	0.12	+1.5
1,391,527	-		LRK53_RS06050	0.12	+0.6
1,391,527	-		LRK53_RS06050	0.12	+1.5
1,391,527	-		LRK53_RS06050	0.12	-0.8
1,391,527	-		LRK53_RS06050	0.12	-1.2
1,391,527	-		LRK53_RS06050	0.12	-0.9
1,391,551	-		LRK53_RS06050	0.18	-1.1
1,391,551	-		LRK53_RS06050	0.18	-0.2
1,391,551	-		LRK53_RS06050	0.18	+1.9
1,391,551	-		LRK53_RS06050	0.18	+0.7
1,391,551	-		LRK53_RS06050	0.18	-0.6
1,391,551	-		LRK53_RS06050	0.18	-0.1
1,391,551	-		LRK53_RS06050	0.18	-1.5
1,391,618	+		LRK53_RS06050	0.36	-2.2
1,391,618	+		LRK53_RS06050	0.36	+1.7
1,391,618	+		LRK53_RS06050	0.36	-0.0
1,391,618	+		LRK53_RS06050	0.36	-0.8
1,391,618	+		LRK53_RS06050	0.36	-0.1
1,391,618	+		LRK53_RS06050	0.36	-0.3
1,391,618	+		LRK53_RS06050	0.36	-0.6
1,391,618	+		LRK53_RS06050	0.36	-1.2
1,391,618	+		LRK53_RS06050	0.36	-0.3
1,391,618	+		LRK53_RS06050	0.36	-1.2
1,391,619	-		LRK53_RS06050	0.36	+0.7
1,391,619	-		LRK53_RS06050	0.36	-1.4
1,391,619	-		LRK53_RS06050	0.36	+0.9
1,391,619	-		LRK53_RS06050	0.36	-0.2
1,391,619	-		LRK53_RS06050	0.36	-1.5
1,391,647	+		LRK53_RS06050	0.43	+0.4
1,391,647	+		LRK53_RS06050	0.43	-1.7
1,391,647	+		LRK53_RS06050	0.43	+0.7
1,391,647	+		LRK53_RS06050	0.43	-0.8
1,391,647	+		LRK53_RS06050	0.43	-0.1
1,391,647	+		LRK53_RS06050	0.43	-1.5
1,391,647	+		LRK53_RS06050	0.43	+0.3
1,391,647	+		LRK53_RS06050	0.43	+0.6
1,391,647	+		LRK53_RS06050	0.43	+0.4
1,391,647	+		LRK53_RS06050	0.43	-0.2
1,391,647	+		LRK53_RS06050	0.43	-0.7
1,391,648	-		LRK53_RS06050	0.43	+2.6
1,391,648	-		LRK53_RS06050	0.43	-0.3
1,391,648	-		LRK53_RS06050	0.43	+1.3
1,391,648	-		LRK53_RS06050	0.43	+0.2
1,391,648	-		LRK53_RS06050	0.43	+0.7
1,391,648	-		LRK53_RS06050	0.43	+0.1
1,391,648	-		LRK53_RS06050	0.43	-0.7
1,391,744	+		LRK53_RS06050	0.68	-0.4
1,391,744	+		LRK53_RS06050	0.68	-1.7
1,391,744	+		LRK53_RS06050	0.68	+0.6
1,391,745	-		LRK53_RS06050	0.68	-1.7
1,391,745	-		LRK53_RS06050	0.68	-2.4
1,391,745	-		LRK53_RS06050	0.68	-1.2