Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS05685

Experiment: biofilm; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Aluminum chloride 1mM
1,318,757	+		LRK53_RS05680	0.35	+1.3
1,318,757	+		LRK53_RS05680	0.35	+0.3
1,318,758	-		LRK53_RS05680	0.36	-0.1
1,318,758	-		LRK53_RS05680	0.36	+0.2
1,319,135	+		LRK53_RS05680	0.81	-1.2
1,319,136	-		LRK53_RS05680	0.81	-1.8
1,319,136	-		LRK53_RS05680	0.81	-2.1
1,319,136	-		LRK53_RS05680	0.81	-0.3
1,319,136	-		LRK53_RS05680	0.81	-0.4
1,319,136	-		LRK53_RS05680	0.81	-2.3
1,319,136	-		LRK53_RS05680	0.81	+1.2
1,319,136	-		LRK53_RS05680	0.81	-0.8
1,319,136	-		LRK53_RS05680	0.81	+1.8
1,319,318	+				-0.5
1,319,318	+				-0.6
1,319,318	+				-0.4
1,319,318	+				-0.2
1,319,318	+				-2.9
1,319,318	+				-1.0
1,319,318	+				-0.8
1,319,318	+				+0.2
1,319,318	+				+0.0
1,319,318	+				-1.6
1,319,318	+				-1.1
1,319,318	+				-0.2
1,319,318	+				-1.6
1,319,318	+				-0.2
1,319,318	+				+0.8
1,319,318	+				+1.4
1,319,318	+				-0.9
1,319,318	+				+0.5
1,319,318	+				-0.2
1,319,318	+				-0.2
1,319,318	+				+0.3
1,319,318	+				-0.1
1,319,318	+				-2.3
1,319,318	+				+0.5
1,319,318	+				+1.2
1,319,318	+				-1.6
1,319,318	+				-0.8
1,319,318	+				-1.1
1,319,318	+				-0.4
1,319,318	+				-0.9
1,319,318	+				+0.5
1,319,318	+				-0.4
1,319,319	-				-1.4
1,319,319	-				-1.1
1,319,319	-				-0.4
1,319,319	-				-2.4
1,319,319	-				-2.9
1,319,319	-				-0.3
1,319,319	-				-0.3
1,319,319	-				-3.2
1,319,319	-				-1.9
1,319,319	-				-0.9
1,319,319	-				-0.1
1,319,319	-				-1.3
1,319,319	-				-0.6
1,319,319	-				+0.4
1,319,319	-				-0.8
1,319,319	-				-0.2
1,319,319	-				-2.5
1,319,319	-				-0.4
1,319,319	-				+1.5
1,319,319	-				-0.1
1,319,319	-				-1.1
1,319,319	-				-0.2
1,319,319	-				+1.0
1,319,319	-				-0.4
1,319,319	-				-0.9
1,319,319	-				+0.4
1,319,319	-				-2.4
1,319,319	-				-1.1
1,319,319	-				-1.7
1,319,319	-				+0.3
1,319,319	-				-1.3
1,319,319	-				-1.3
1,319,319	-				-0.4
1,319,319	-				-0.2
1,319,319	-				+1.3
1,319,319	-				+0.2
1,319,319	-				+0.2
1,319,319	-				+0.2
1,319,319	-				-0.9
1,319,319	-				-1.3
1,319,319	-				+2.3
1,319,319	-				+0.2
1,319,319	-				-1.6
1,319,319	-				-1.2
1,319,319	-				-2.6
1,319,319	-				-0.7
1,319,319	-				+0.9
1,319,484	-				+1.4
1,319,484	-				+1.0
1,319,486	+				-0.2
1,319,486	+				+1.8
1,319,486	+				-3.2
1,319,486	+				-2.1
1,319,487	-				-0.2
1,319,499	-				-1.2
1,319,798	+		LRK53_RS05685	0.15	-1.8
1,319,798	+		LRK53_RS05685	0.15	-1.2
1,319,798	+		LRK53_RS05685	0.15	-0.2
1,319,798	+		LRK53_RS05685	0.15	+1.3
1,319,798	+		LRK53_RS05685	0.15	-1.0
1,319,798	+		LRK53_RS05685	0.15	+1.2
1,319,799	-		LRK53_RS05685	0.15	-1.6
1,319,799	-		LRK53_RS05685	0.15	-0.2
1,319,799	-		LRK53_RS05685	0.15	+3.8
1,319,799	-		LRK53_RS05685	0.15	+1.2
1,319,799	-		LRK53_RS05685	0.15	+0.2
1,319,799	-		LRK53_RS05685	0.15	-1.2
1,319,831	+		LRK53_RS05685	0.18	-2.1
1,319,832	-		LRK53_RS05685	0.18	-2.6
1,319,832	-		LRK53_RS05685	0.18	+0.8
1,319,843	+		LRK53_RS05685	0.19	+0.1
1,319,843	+		LRK53_RS05685	0.19	-1.6
1,319,983	+		LRK53_RS05685	0.33	-4.6
1,319,983	+		LRK53_RS05685	0.33	-1.0
1,320,106	+		LRK53_RS05685	0.44	-2.5
1,320,106	+		LRK53_RS05685	0.44	-1.3
1,320,106	+		LRK53_RS05685	0.44	-1.2
1,320,106	+		LRK53_RS05685	0.44	+0.8
1,320,106	+		LRK53_RS05685	0.44	-1.5
1,320,106	+		LRK53_RS05685	0.44	-1.8
1,320,106	+		LRK53_RS05685	0.44	-1.8
1,320,106	+		LRK53_RS05685	0.44	+1.7
1,320,106	+		LRK53_RS05685	0.44	-2.0
1,320,106	+		LRK53_RS05685	0.44	-0.4
1,320,106	+		LRK53_RS05685	0.44	-0.4
1,320,106	+		LRK53_RS05685	0.44	-1.5
1,320,106	+		LRK53_RS05685	0.44	-0.6
1,320,106	+		LRK53_RS05685	0.44	-0.5
1,320,106	+		LRK53_RS05685	0.44	+0.3
1,320,106	+		LRK53_RS05685	0.44	-1.9
1,320,106	+		LRK53_RS05685	0.44	-1.6
1,320,106	+		LRK53_RS05685	0.44	-2.8
1,320,106	+		LRK53_RS05685	0.44	-1.8
1,320,106	+		LRK53_RS05685	0.44	-1.4
1,320,106	+		LRK53_RS05685	0.44	-2.5
1,320,106	+		LRK53_RS05685	0.44	-1.5
1,320,106	+		LRK53_RS05685	0.44	-1.5
1,320,106	+		LRK53_RS05685	0.44	-0.3
1,320,106	+		LRK53_RS05685	0.44	+1.0
1,320,106	+		LRK53_RS05685	0.44	-3.3
1,320,106	+		LRK53_RS05685	0.44	-1.9
1,320,106	+		LRK53_RS05685	0.44	-0.1
1,320,106	+		LRK53_RS05685	0.44	+0.1
1,320,106	+		LRK53_RS05685	0.44	-0.8
1,320,106	+		LRK53_RS05685	0.44	+0.3
1,320,106	+		LRK53_RS05685	0.44	-1.1
1,320,106	+		LRK53_RS05685	0.44	-1.1
1,320,106	+		LRK53_RS05685	0.44	-1.0
1,320,106	+		LRK53_RS05685	0.44	+0.0
1,320,106	+		LRK53_RS05685	0.44	-0.7
1,320,107	-		LRK53_RS05685	0.45	-0.9
1,320,107	-		LRK53_RS05685	0.45	-1.9
1,320,107	-		LRK53_RS05685	0.45	+0.3
1,320,107	-		LRK53_RS05685	0.45	+2.0
1,320,107	-		LRK53_RS05685	0.45	+1.0
1,320,107	-		LRK53_RS05685	0.45	-0.4
1,320,107	-		LRK53_RS05685	0.45	-1.1
1,320,107	-		LRK53_RS05685	0.45	-0.7
1,320,107	-		LRK53_RS05685	0.45	-2.2
1,320,107	-		LRK53_RS05685	0.45	-0.2
1,320,107	-		LRK53_RS05685	0.45	-2.4
1,320,107	-		LRK53_RS05685	0.45	-1.9
1,320,107	-		LRK53_RS05685	0.45	-0.9
1,320,107	-		LRK53_RS05685	0.45	-2.7
1,320,107	-		LRK53_RS05685	0.45	-2.3
1,320,107	-		LRK53_RS05685	0.45	-0.7
1,320,107	-		LRK53_RS05685	0.45	-1.1
1,320,107	-		LRK53_RS05685	0.45	-0.0
1,320,107	-		LRK53_RS05685	0.45	-0.8
1,320,107	-		LRK53_RS05685	0.45	-1.4
1,320,107	-		LRK53_RS05685	0.45	-0.0
1,320,107	-		LRK53_RS05685	0.45	-0.2
1,320,107	-		LRK53_RS05685	0.45	-2.6
1,320,107	-		LRK53_RS05685	0.45	-0.6
1,320,239	+		LRK53_RS05685	0.57	-1.3
1,320,239	+		LRK53_RS05685	0.57	-3.1
1,320,239	+		LRK53_RS05685	0.57	-1.1
1,320,239	+		LRK53_RS05685	0.57	+0.6
1,320,239	+		LRK53_RS05685	0.57	-0.9
1,320,239	+		LRK53_RS05685	0.57	+0.8
1,320,239	+		LRK53_RS05685	0.57	-2.3
1,320,239	+		LRK53_RS05685	0.57	+1.5
1,320,239	+		LRK53_RS05685	0.57	+1.2
1,320,239	+		LRK53_RS05685	0.57	-1.1
1,320,239	+		LRK53_RS05685	0.57	-2.4
1,320,240	-		LRK53_RS05685	0.57	+0.2
1,320,240	-		LRK53_RS05685	0.57	-0.6
1,320,240	-		LRK53_RS05685	0.57	-1.2
1,320,240	-		LRK53_RS05685	0.57	-2.3
1,320,240	-		LRK53_RS05685	0.57	-1.6
1,320,240	-		LRK53_RS05685	0.57	-0.5
1,320,240	-		LRK53_RS05685	0.57	-0.7
1,320,240	-		LRK53_RS05685	0.57	+0.2
1,320,240	-		LRK53_RS05685	0.57	-1.0
1,320,240	-		LRK53_RS05685	0.57	-1.2
1,320,240	-		LRK53_RS05685	0.57	+0.2
1,320,240	-		LRK53_RS05685	0.57	-3.0
1,320,331	+		LRK53_RS05685	0.66	-0.7
1,320,331	+		LRK53_RS05685	0.66	-1.8
1,320,331	+		LRK53_RS05685	0.66	-1.9
1,320,331	+		LRK53_RS05685	0.66	-0.5
1,320,331	+		LRK53_RS05685	0.66	-1.2
1,320,331	+		LRK53_RS05685	0.66	-1.3
1,320,331	+		LRK53_RS05685	0.66	-1.7
1,320,332	-		LRK53_RS05685	0.66	+1.5
1,320,332	-		LRK53_RS05685	0.66	-1.1
1,320,332	-		LRK53_RS05685	0.66	+0.4
1,320,332	-		LRK53_RS05685	0.66	+0.6
1,320,332	-		LRK53_RS05685	0.66	-0.2
1,320,332	-		LRK53_RS05685	0.66	-0.8
1,320,332	-		LRK53_RS05685	0.66	-1.3
1,320,332	-		LRK53_RS05685	0.66	-0.8
1,320,332	-		LRK53_RS05685	0.66	+1.0
1,320,502	-		LRK53_RS05685	0.83	-1.6
1,320,502	-		LRK53_RS05685	0.83	-0.5
1,320,548	+		LRK53_RS05685	0.87	-1.1
1,320,548	+		LRK53_RS05685	0.87	-3.7
1,320,548	+		LRK53_RS05685	0.87	+0.9
1,320,548	+		LRK53_RS05685	0.87	-3.4
1,320,548	+		LRK53_RS05685	0.87	-1.2
1,320,548	+		LRK53_RS05685	0.87	-0.4
1,320,548	+		LRK53_RS05685	0.87	-0.9
1,320,548	+		LRK53_RS05685	0.87	+0.9
1,320,548	+		LRK53_RS05685	0.87	-0.4
1,320,548	+		LRK53_RS05685	0.87	-1.9
1,320,548	+		LRK53_RS05685	0.87	-0.2
1,320,548	+		LRK53_RS05685	0.87	-0.3
1,320,548	+		LRK53_RS05685	0.87	-1.5
1,320,549	-		LRK53_RS05685	0.87	-1.6
1,320,549	-		LRK53_RS05685	0.87	-2.8
1,320,549	-		LRK53_RS05685	0.87	+1.5
1,320,549	-		LRK53_RS05685	0.87	-1.6
1,320,549	-		LRK53_RS05685	0.87	+0.2
1,320,549	-		LRK53_RS05685	0.87	-0.9
1,320,549	-		LRK53_RS05685	0.87	+1.5
1,320,549	-		LRK53_RS05685	0.87	-2.3
1,320,549	-		LRK53_RS05685	0.87	-0.2
1,320,549	-		LRK53_RS05685	0.87	-0.8
1,320,549	-		LRK53_RS05685	0.87	-1.6
1,320,549	-		LRK53_RS05685	0.87	-1.0
1,320,549	-		LRK53_RS05685	0.87	-1.1
1,320,549	-		LRK53_RS05685	0.87	-1.3
1,320,549	-		LRK53_RS05685	0.87	-1.6
1,320,549	-		LRK53_RS05685	0.87	+0.2
1,320,549	-		LRK53_RS05685	0.87	-0.4
1,320,654	-				-3.1
1,320,654	-				-1.3
1,320,654	-				-0.5
1,320,654	-				-2.1
1,320,745	+				-1.1
1,320,746	-				-0.6
1,321,122	+		LRK53_RS05690	0.23	-0.5
1,321,122	+		LRK53_RS05690	0.23	-0.9
1,321,122	+		LRK53_RS05690	0.23	-0.0
1,321,122	+		LRK53_RS05690	0.23	-0.1
1,321,122	+		LRK53_RS05690	0.23	-0.4
1,321,123	-		LRK53_RS05690	0.23	+1.3
1,321,123	-		LRK53_RS05690	0.23	+0.4
1,321,123	-		LRK53_RS05690	0.23	+0.2
1,321,123	-		LRK53_RS05690	0.23	-0.0
1,321,123	-		LRK53_RS05690	0.23	-0.4
1,321,123	-		LRK53_RS05690	0.23	+0.4
1,321,123	-		LRK53_RS05690	0.23	+0.1
1,321,353	+		LRK53_RS05690	0.43	-0.8
1,321,353	+		LRK53_RS05690	0.43	+0.5
1,321,353	+		LRK53_RS05690	0.43	-1.7
1,321,353	+		LRK53_RS05690	0.43	+0.6
1,321,353	+		LRK53_RS05690	0.43	-1.5
1,321,353	+		LRK53_RS05690	0.43	-0.7
1,321,353	+		LRK53_RS05690	0.43	-1.1
1,321,353	+		LRK53_RS05690	0.43	-0.8
1,321,354	-		LRK53_RS05690	0.43	-1.7