Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS05340

Experiment: biofilm; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Aluminum chloride 1mM
1,250,386	+				+1.2
1,250,386	+				+1.7
1,250,387	-				+0.4
1,250,387	-				+0.1
1,250,405	+				+0.7
1,250,405	+				-1.3
1,250,405	+				+0.7
1,250,405	+				-0.3
1,250,406	-				-0.8
1,250,406	-				-1.7
1,250,406	-				+1.3
1,250,406	-				+1.5
1,250,406	-				+0.9
1,250,439	-				-0.1
1,250,457	+				-1.8
1,250,457	+				+0.1
1,250,457	+				-0.3
1,250,457	+				+1.5
1,250,457	+				-0.2
1,250,457	+				-0.8
1,250,457	+				-2.7
1,250,458	-				+0.5
1,250,458	-				-0.5
1,250,458	-				-0.7
1,250,458	-				+0.1
1,250,987	+		LRK53_RS05335	0.71	-0.4
1,250,987	+		LRK53_RS05335	0.71	-1.1
1,250,987	+		LRK53_RS05335	0.71	-0.6
1,250,987	+		LRK53_RS05335	0.71	-1.3
1,250,987	+		LRK53_RS05335	0.71	-0.4
1,250,987	+		LRK53_RS05335	0.71	-1.2
1,250,987	+		LRK53_RS05335	0.71	-0.3
1,250,987	+		LRK53_RS05335	0.71	+0.3
1,250,988	-		LRK53_RS05335	0.71	-0.4
1,250,988	-		LRK53_RS05335	0.71	-0.1
1,250,988	-		LRK53_RS05335	0.71	+0.1
1,250,988	-		LRK53_RS05335	0.71	+0.4
1,250,988	-		LRK53_RS05335	0.71	-1.0
1,250,988	-		LRK53_RS05335	0.71	-0.6
1,250,988	-		LRK53_RS05335	0.71	-0.4
1,250,988	-		LRK53_RS05335	0.71	+0.1
1,250,988	-		LRK53_RS05335	0.71	-1.1
1,250,988	-		LRK53_RS05335	0.71	+1.1
1,250,988	-		LRK53_RS05335	0.71	-1.1
1,250,988	-		LRK53_RS05335	0.71	-0.0
1,250,988	-		LRK53_RS05335	0.71	-2.6
1,251,095	+		LRK53_RS05335	0.85	-0.1
1,251,095	+		LRK53_RS05335	0.85	+0.3
1,251,095	+		LRK53_RS05335	0.85	-0.1
1,251,095	+		LRK53_RS05335	0.85	+0.1
1,251,095	+		LRK53_RS05335	0.85	-0.0
1,251,095	+		LRK53_RS05335	0.85	-1.4
1,251,095	+		LRK53_RS05335	0.85	-1.1
1,251,095	+		LRK53_RS05335	0.85	-0.4
1,251,096	-		LRK53_RS05335	0.85	-0.1
1,251,096	-		LRK53_RS05335	0.85	-1.7
1,251,096	-		LRK53_RS05335	0.85	-0.4
1,251,096	-		LRK53_RS05335	0.85	-1.7
1,251,096	-		LRK53_RS05335	0.85	-1.4
1,251,096	-		LRK53_RS05335	0.85	-2.7
1,251,096	-		LRK53_RS05335	0.85	-0.6
1,251,130	+		LRK53_RS05335	0.89	-1.9
1,251,130	+		LRK53_RS05335	0.89	-2.0
1,251,130	+		LRK53_RS05335	0.89	-1.6
1,251,130	+		LRK53_RS05335	0.89	-1.0
1,251,131	-		LRK53_RS05335	0.89	-0.4
1,251,131	-		LRK53_RS05335	0.89	-0.4
1,251,131	-		LRK53_RS05335	0.89	+0.2
1,251,131	-		LRK53_RS05335	0.89	+0.0
1,251,241	+				-1.0
1,251,241	+				+0.1
1,251,242	-				+0.7
1,251,293	+				-0.1
1,251,293	+				-0.7
1,251,293	+				-0.2
1,251,293	+				+0.4
1,251,293	+				-1.4
1,251,293	+				+0.4
1,251,294	-				+0.1
1,251,294	-				+0.2
1,251,294	-				-1.8
1,251,294	-				+0.7
1,251,325	+				-1.9
1,251,325	+				+0.6
1,251,325	+				+0.1
1,251,325	+				-1.2
1,251,326	-				-2.8
1,251,326	-				-1.0
1,251,704	+		LRK53_RS05340	0.64	-1.1
1,251,806	+		LRK53_RS05340	0.82	-2.2
1,251,807	-		LRK53_RS05340	0.82	-1.7
1,251,807	-		LRK53_RS05340	0.82	-2.7
1,251,807	-		LRK53_RS05340	0.82	-0.3
1,251,930	-		LRK53_RS05345	0.16	+0.6
1,251,930	-		LRK53_RS05345	0.16	-2.1
1,251,954	+		LRK53_RS05345	0.24	-0.4
1,251,954	+		LRK53_RS05345	0.24	+1.5
1,251,984	+		LRK53_RS05345	0.35	+0.4
1,251,985	-		LRK53_RS05345	0.35	-1.1
1,251,985	-		LRK53_RS05345	0.35	-1.3
1,251,985	-		LRK53_RS05345	0.35	+0.1
1,252,038	+		LRK53_RS05345	0.54	-2.0
1,252,038	+		LRK53_RS05345	0.54	-1.1
1,252,038	+		LRK53_RS05345	0.54	-1.1
1,252,038	+		LRK53_RS05345	0.54	-0.2
1,252,038	+		LRK53_RS05345	0.54	-0.5
1,252,039	-		LRK53_RS05345	0.55	+1.1
1,252,039	-		LRK53_RS05345	0.55	-1.0
1,252,041	+		LRK53_RS05345	0.55	+0.1
1,252,041	+		LRK53_RS05345	0.55	-0.1
1,252,041	+		LRK53_RS05345	0.55	+0.4
1,252,041	+		LRK53_RS05345	0.55	-0.1
1,252,041	+		LRK53_RS05345	0.55	+1.5
1,252,042	-		LRK53_RS05345	0.56	+2.0
1,252,042	-		LRK53_RS05345	0.56	-0.1
1,252,042	-		LRK53_RS05345	0.56	-2.9
1,252,042	-		LRK53_RS05345	0.56	+0.7
1,252,042	-		LRK53_RS05345	0.56	+0.3
1,252,042	-		LRK53_RS05345	0.56	-1.2
1,252,042	-		LRK53_RS05345	0.56	-1.1
1,252,042	-		LRK53_RS05345	0.56	+1.4
1,252,042	-		LRK53_RS05345	0.56	-1.4
1,252,042	-		LRK53_RS05345	0.56	-0.2
1,252,086	+		LRK53_RS05345	0.71	-0.7
1,252,086	+		LRK53_RS05345	0.71	-1.2
1,252,086	+		LRK53_RS05345	0.71	-0.5
1,252,086	+		LRK53_RS05345	0.71	-0.3
1,252,086	+		LRK53_RS05345	0.71	-0.8
1,252,086	+		LRK53_RS05345	0.71	-0.1
1,252,086	+		LRK53_RS05345	0.71	-0.6
1,252,087	-		LRK53_RS05345	0.72	+0.5
1,252,087	-		LRK53_RS05345	0.72	+0.5
1,252,087	-		LRK53_RS05345	0.72	-1.1
1,252,087	-		LRK53_RS05345	0.72	-2.3
1,252,087	-		LRK53_RS05345	0.72	+0.7
1,252,087	-		LRK53_RS05345	0.72	+0.2
1,252,087	-		LRK53_RS05345	0.72	-0.7
1,252,168	+				+1.9
1,252,168	+				+2.2
1,252,168	+				+0.1
1,252,168	+				-0.1
1,252,168	+				-2.4
1,252,168	+				-0.4
1,252,169	-				+0.1
1,252,169	-				+0.9
1,252,169	-				+1.4
1,252,169	-				-0.1
1,252,200	-				-1.7
1,252,402	-		LRK53_RS05350	0.19	-0.1
1,252,402	-		LRK53_RS05350	0.19	-0.7
1,252,448	+		LRK53_RS05350	0.26	-1.5
1,252,449	-		LRK53_RS05350	0.26	-1.2
1,252,449	-		LRK53_RS05350	0.26	+1.4
1,252,449	-		LRK53_RS05350	0.26	-0.8
1,252,449	-		LRK53_RS05350	0.26	-0.4
1,252,449	-		LRK53_RS05350	0.26	+0.0
1,252,508	+		LRK53_RS05350	0.34	+0.1
1,252,508	+		LRK53_RS05350	0.34	-1.2
1,252,509	-		LRK53_RS05350	0.34	-1.2
1,252,509	-		LRK53_RS05350	0.34	-0.6
1,252,509	-		LRK53_RS05350	0.34	+0.2
1,252,509	-		LRK53_RS05350	0.34	-0.6
1,252,559	+		LRK53_RS05350	0.41	-0.8
1,252,559	+		LRK53_RS05350	0.41	-2.3
1,252,559	+		LRK53_RS05350	0.41	+0.6
1,252,559	+		LRK53_RS05350	0.41	-1.7
1,252,559	+		LRK53_RS05350	0.41	+1.7
1,252,559	+		LRK53_RS05350	0.41	+1.5
1,252,559	+		LRK53_RS05350	0.41	-1.8
1,252,559	+		LRK53_RS05350	0.41	-1.0
1,252,559	+		LRK53_RS05350	0.41	-0.6
1,252,559	+		LRK53_RS05350	0.41	+0.3
1,252,560	-		LRK53_RS05350	0.41	-1.5
1,252,560	-		LRK53_RS05350	0.41	-0.4
1,252,560	-		LRK53_RS05350	0.41	+1.6
1,252,560	-		LRK53_RS05350	0.41	-0.3
1,252,560	-		LRK53_RS05350	0.41	+0.3
1,252,560	-		LRK53_RS05350	0.41	-0.7
1,252,560	-		LRK53_RS05350	0.41	+1.9
1,252,560	-		LRK53_RS05350	0.41	-2.0
1,252,560	-		LRK53_RS05350	0.41	-0.5
1,252,596	-		LRK53_RS05350	0.46	-0.3
1,252,596	-		LRK53_RS05350	0.46	-1.3
1,252,610	+		LRK53_RS05350	0.48	-0.1
1,252,610	+		LRK53_RS05350	0.48	-0.3
1,252,610	+		LRK53_RS05350	0.48	-0.8
1,252,610	+		LRK53_RS05350	0.48	-0.2
1,252,610	+		LRK53_RS05350	0.48	-1.4
1,252,611	-		LRK53_RS05350	0.48	+2.7
1,252,611	-		LRK53_RS05350	0.48	+1.2
1,252,611	-		LRK53_RS05350	0.48	-0.4
1,252,611	-		LRK53_RS05350	0.48	+0.4
1,252,637	+		LRK53_RS05350	0.51	+1.3
1,252,637	+		LRK53_RS05350	0.51	-2.1
1,252,637	+		LRK53_RS05350	0.51	-2.6
1,252,637	+		LRK53_RS05350	0.51	+0.3
1,252,637	+		LRK53_RS05350	0.51	+0.2
1,252,637	+		LRK53_RS05350	0.51	-1.4
1,252,637	+		LRK53_RS05350	0.51	-1.8
1,252,637	+		LRK53_RS05350	0.51	-1.4
1,252,637	+		LRK53_RS05350	0.51	-2.1
1,252,637	+		LRK53_RS05350	0.51	-0.6
1,252,637	+		LRK53_RS05350	0.51	+2.3
1,252,637	+		LRK53_RS05350	0.51	-1.8
1,252,638	-		LRK53_RS05350	0.52	-1.7
1,252,638	-		LRK53_RS05350	0.52	-0.6
1,252,638	-		LRK53_RS05350	0.52	-1.0