Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS05075

Experiment: biofilm; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Aluminum chloride 1mM
1,195,800	+		LRK53_RS05065	0.64	-0.5
1,195,800	+		LRK53_RS05065	0.64	-0.0
1,195,800	+		LRK53_RS05065	0.64	-1.0
1,195,800	+		LRK53_RS05065	0.64	-1.0
1,195,801	-		LRK53_RS05065	0.64	-1.9
1,195,801	-		LRK53_RS05065	0.64	-1.4
1,195,801	-		LRK53_RS05065	0.64	-0.1
1,196,191	+				-0.8
1,196,192	-				+0.8
1,196,192	-				-0.6
1,196,192	-				-2.8
1,196,192	-				+0.3
1,196,192	-				-1.0
1,196,192	-				+1.0
1,196,192	-				+2.4
1,196,192	-				-1.5
1,196,212	+				-0.6
1,196,212	+				-0.4
1,196,212	+				-2.8
1,196,212	+				-2.5
1,196,212	+				+1.0
1,196,212	+				-1.8
1,196,212	+				-0.1
1,196,212	+				-1.3
1,196,212	+				+1.0
1,196,212	+				-0.1
1,196,212	+				-2.1
1,196,213	-				-0.6
1,196,213	-				-0.8
1,196,213	-				-1.7
1,196,213	-				-0.2
1,196,213	-				-0.2
1,196,213	-				-2.1
1,196,213	-				+2.2
1,196,213	-				+0.5
1,196,213	-				-0.0
1,196,213	-				+1.0
1,196,213	-				-1.9
1,196,238	+				-0.0
1,196,238	+				+0.4
1,196,238	+				-1.3
1,196,238	+				-0.2
1,196,238	+				+0.1
1,196,238	+				-1.9
1,196,238	+				-0.8
1,196,238	+				-0.6
1,196,239	-				+0.0
1,196,239	-				+0.9
1,196,239	-				-0.3
1,196,239	-				-0.8
1,196,239	-				-1.6
1,196,239	-				-0.6
1,196,253	+				-0.4
1,196,259	+				-0.4
1,196,259	+				-0.3
1,196,259	+				+0.1
1,196,259	+				-0.4
1,196,259	+				-0.4
1,196,259	+				-3.3
1,196,259	+				-0.3
1,196,259	+				+0.6
1,196,259	+				-0.8
1,196,259	+				+0.4
1,196,259	+				-0.4
1,196,259	+				-1.7
1,196,259	+				-0.3
1,196,260	-				-0.6
1,196,260	-				+1.1
1,196,260	-				-0.7
1,196,260	-				-0.6
1,196,260	-				-1.4
1,196,260	-				-0.9
1,196,260	-				-0.7
1,196,260	-				-0.0
1,196,260	-				+0.3
1,196,260	-				-0.2
1,196,260	-				-0.8
1,196,260	-				-0.7
1,196,458	+		LRK53_RS05070	0.45	-1.1
1,196,557	+		LRK53_RS05070	0.67	+0.8
1,196,584	+		LRK53_RS05070	0.73	+1.4
1,196,584	+		LRK53_RS05070	0.73	-0.4
1,196,584	+		LRK53_RS05070	0.73	-0.0
1,196,585	-		LRK53_RS05070	0.73	-1.8
1,196,585	-		LRK53_RS05070	0.73	-2.1
1,196,585	-		LRK53_RS05070	0.73	-1.6
1,196,585	-		LRK53_RS05070	0.73	+0.7
1,196,667	-				-0.2
1,196,745	+				-0.6
1,196,746	-				+2.4
1,196,750	+				+0.0
1,196,750	+				-0.4
1,196,750	+				+0.2
1,196,750	+				+0.4
1,196,751	-				-1.0
1,196,867	-		LRK53_RS05075	0.68	+1.0
1,196,899	+		LRK53_RS05075	0.87	-1.1
1,196,899	+		LRK53_RS05075	0.87	-0.3
1,196,899	+		LRK53_RS05075	0.87	-2.6
1,196,899	+		LRK53_RS05075	0.87	-0.9
1,196,899	+		LRK53_RS05075	0.87	-1.6
1,196,899	+		LRK53_RS05075	0.87	-0.5
1,196,899	+		LRK53_RS05075	0.87	+1.2
1,196,900	-		LRK53_RS05075	0.87	+0.2
1,196,900	-		LRK53_RS05075	0.87	-0.9
1,196,900	-		LRK53_RS05075	0.87	-2.3
1,196,900	-		LRK53_RS05075	0.87	-2.0
1,196,982	+		LRK53_RS05080	0.42	+1.3
1,196,982	+		LRK53_RS05080	0.42	-2.1
1,196,982	+		LRK53_RS05080	0.42	-0.2
1,196,982	+		LRK53_RS05080	0.42	+1.6
1,196,982	+		LRK53_RS05080	0.42	-0.2
1,196,982	+		LRK53_RS05080	0.42	-0.4
1,196,982	+		LRK53_RS05080	0.42	-1.4
1,196,982	+		LRK53_RS05080	0.42	-0.2
1,196,982	+		LRK53_RS05080	0.42	-1.0
1,196,982	+		LRK53_RS05080	0.42	+0.7
1,196,982	+		LRK53_RS05080	0.42	+0.2
1,196,982	+		LRK53_RS05080	0.42	-0.2
1,196,982	+		LRK53_RS05080	0.42	-0.6
1,196,982	+		LRK53_RS05080	0.42	-0.9
1,196,982	+		LRK53_RS05080	0.42	+0.3
1,196,983	-		LRK53_RS05080	0.43	-1.8
1,196,983	-		LRK53_RS05080	0.43	-2.8
1,196,983	-		LRK53_RS05080	0.43	-1.9
1,196,983	-		LRK53_RS05080	0.43	-1.6
1,196,983	-		LRK53_RS05080	0.43	-0.6
1,196,983	-		LRK53_RS05080	0.43	-0.7
1,196,983	-		LRK53_RS05080	0.43	-0.4
1,196,983	-		LRK53_RS05080	0.43	+1.9
1,196,983	-		LRK53_RS05080	0.43	-0.3
1,196,983	-		LRK53_RS05080	0.43	-0.4
1,196,983	-		LRK53_RS05080	0.43	+0.3
1,196,983	-		LRK53_RS05080	0.43	-0.4
1,196,983	-		LRK53_RS05080	0.43	-0.5
1,196,983	-		LRK53_RS05080	0.43	-0.4
1,196,983	-		LRK53_RS05080	0.43	-3.0
1,196,983	-		LRK53_RS05080	0.43	+0.0
1,196,983	-		LRK53_RS05080	0.43	-0.2
1,196,983	-		LRK53_RS05080	0.43	-1.5
1,196,983	-		LRK53_RS05080	0.43	+1.6
1,196,983	-		LRK53_RS05080	0.43	-2.3
1,196,983	-		LRK53_RS05080	0.43	-0.8
1,196,983	-		LRK53_RS05080	0.43	+1.4
1,197,073	+				-0.6
1,197,073	+				-0.8
1,197,073	+				-0.1
1,197,073	+				+0.8
1,197,073	+				-2.2
1,197,073	+				-0.2
1,197,074	-				-0.3
1,197,074	-				+2.3
1,197,074	-				-0.4
1,197,074	-				-1.9
1,197,074	-				-0.4
1,197,074	-				-2.5
1,197,074	-				-0.0
1,197,074	-				+0.6
1,197,162	+				+1.4
1,197,162	+				-0.0
1,197,163	-				-1.0
1,197,171	+				-1.3
1,197,171	+				-0.4
1,197,176	+				-1.0
1,197,176	+				-0.2
1,197,176	+				-0.5
1,197,176	+				-1.5
1,197,176	+				-0.3
1,197,176	+				-1.1
1,197,177	-				+0.9
1,197,177	-				-1.1
1,197,177	-				-0.2
1,197,177	-				+2.2
1,197,177	-				+0.4
1,197,186	+				+0.8
1,197,193	-				-1.9
1,197,193	-				-0.7
1,197,193	-				+0.2
1,197,193	-				+1.2
1,197,193	-				-1.6
1,197,193	-				-1.7
1,197,228	+				-3.4
1,197,229	-				-0.1
1,197,229	-				+0.8
1,197,330	+				+0.1
1,197,330	+				-0.9
1,197,330	+				-0.8
1,197,330	+				-1.3
1,197,330	+				+0.0
1,197,331	-				+1.1
1,197,415	-		LRK53_RS05085	0.11	+0.2
1,197,600	+		LRK53_RS05085	0.18	-1.0
1,197,600	+		LRK53_RS05085	0.18	-4.6
1,197,600	+		LRK53_RS05085	0.18	-1.6
1,197,600	+		LRK53_RS05085	0.18	-0.9
1,197,600	+		LRK53_RS05085	0.18	+0.2
1,197,600	+		LRK53_RS05085	0.18	-0.0
1,197,600	+		LRK53_RS05085	0.18	+0.4
1,197,600	+		LRK53_RS05085	0.18	-0.2
1,197,600	+		LRK53_RS05085	0.18	-1.6
1,197,600	+		LRK53_RS05085	0.18	-0.4
1,197,600	+		LRK53_RS05085	0.18	-0.5
1,197,600	+		LRK53_RS05085	0.18	+0.4
1,197,600	+		LRK53_RS05085	0.18	-0.7
1,197,600	+		LRK53_RS05085	0.18	-2.4
1,197,600	+		LRK53_RS05085	0.18	-1.8
1,197,601	-		LRK53_RS05085	0.19	-0.7
1,197,601	-		LRK53_RS05085	0.19	-1.9
1,197,601	-		LRK53_RS05085	0.19	-1.0
1,197,601	-		LRK53_RS05085	0.19	-1.1
1,197,601	-		LRK53_RS05085	0.19	-1.3
1,197,601	-		LRK53_RS05085	0.19	-0.0
1,197,601	-		LRK53_RS05085	0.19	-1.2
1,197,601	-		LRK53_RS05085	0.19	-0.2
1,197,601	-		LRK53_RS05085	0.19	-0.5
1,197,601	-		LRK53_RS05085	0.19	+1.4
1,197,601	-		LRK53_RS05085	0.19	-0.2
1,197,601	-		LRK53_RS05085	0.19	-1.6
1,197,601	-		LRK53_RS05085	0.19	-2.7
1,197,601	-		LRK53_RS05085	0.19	-1.0
1,197,606	+		LRK53_RS05085	0.19	-0.7
1,197,606	+		LRK53_RS05085	0.19	+0.2
1,197,607	-		LRK53_RS05085	0.19	+0.2
1,197,607	-		LRK53_RS05085	0.19	+1.8
1,197,705	+		LRK53_RS05085	0.23	+0.3
1,197,705	+		LRK53_RS05085	0.23	-0.4
1,197,705	+		LRK53_RS05085	0.23	+0.8
1,197,705	+		LRK53_RS05085	0.23	+0.7
1,197,705	+		LRK53_RS05085	0.23	-2.6
1,197,705	+		LRK53_RS05085	0.23	-1.1
1,197,706	-		LRK53_RS05085	0.23	-1.1
1,197,706	-		LRK53_RS05085	0.23	-1.9
1,197,706	-		LRK53_RS05085	0.23	+0.8
1,197,706	-		LRK53_RS05085	0.23	-2.1
1,197,747	+		LRK53_RS05085	0.25	-2.0
1,197,747	+		LRK53_RS05085	0.25	+0.5
1,197,747	+		LRK53_RS05085	0.25	+0.3
1,197,747	+		LRK53_RS05085	0.25	+1.2
1,197,747	+		LRK53_RS05085	0.25	-1.8
1,197,747	+		LRK53_RS05085	0.25	-1.6
1,197,747	+		LRK53_RS05085	0.25	-0.0
1,197,748	-		LRK53_RS05085	0.25	-1.8
1,197,748	-		LRK53_RS05085	0.25	-1.4
1,197,748	-		LRK53_RS05085	0.25	+2.8
1,197,748	-		LRK53_RS05085	0.25	+0.2
1,197,748	-		LRK53_RS05085	0.25	-0.4
1,197,748	-		LRK53_RS05085	0.25	+1.1
1,197,748	-		LRK53_RS05085	0.25	-0.6
1,197,748	-		LRK53_RS05085	0.25	-0.0
1,197,748	-		LRK53_RS05085	0.25	-1.0
1,197,748	-		LRK53_RS05085	0.25	+1.2
1,197,748	-		LRK53_RS05085	0.25	+0.0
1,197,748	-		LRK53_RS05085	0.25	-0.7
1,197,748	-		LRK53_RS05085	0.25	+1.3
1,197,748	-		LRK53_RS05085	0.25	-2.0
1,197,748	-		LRK53_RS05085	0.25	+0.6
1,197,748	-		LRK53_RS05085	0.25	+0.2
1,197,748	-		LRK53_RS05085	0.25	+1.2
1,197,813	+		LRK53_RS05085	0.27	+1.3
1,197,813	+		LRK53_RS05085	0.27	+0.4
1,197,870	+		LRK53_RS05085	0.30	-2.3
1,197,870	+		LRK53_RS05085	0.30	-0.4
1,197,870	+		LRK53_RS05085	0.30	-1.5
1,197,871	-		LRK53_RS05085	0.30	-0.2
1,197,871	-		LRK53_RS05085	0.30	+1.1