Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04485

Experiment: biofilm; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Aluminum chloride 1mM
1,041,083	+		LRK53_RS04480	0.77	-0.7
1,041,083	+		LRK53_RS04480	0.77	+0.2
1,041,083	+		LRK53_RS04480	0.77	-0.0
1,041,083	+		LRK53_RS04480	0.77	+0.6
1,041,083	+		LRK53_RS04480	0.77	-1.8
1,041,084	-		LRK53_RS04480	0.77	-0.9
1,041,084	-		LRK53_RS04480	0.77	-0.9
1,041,464	-				-0.3
1,041,641	+				-0.9
1,041,642	-				+0.1
1,041,642	-				-2.1
1,041,720	+				+0.2
1,041,720	+				+0.1
1,041,720	+				-1.3
1,041,720	+				-1.2
1,041,720	+				+1.8
1,041,720	+				-0.2
1,041,720	+				-0.2
1,041,720	+				+1.6
1,041,720	+				-0.4
1,041,721	-				-1.7
1,041,721	-				-1.4
1,041,721	-				+1.8
1,041,721	-				+1.0
1,041,721	-				+0.1
1,041,721	-				-0.2
1,041,721	-				+0.9
1,041,721	-				-0.8
1,041,721	-				+0.6
1,041,721	-				+0.5
1,041,721	-				-1.8
1,041,721	-				+0.0
1,041,721	-				-0.8
1,041,721	-				+0.3
1,041,721	-				-0.5
1,041,721	-				-1.8
1,041,721	-				+0.2
1,041,729	+				-0.4
1,041,729	+				-0.7
1,041,729	+				+1.8
1,041,729	+				-1.2
1,041,729	+				+0.2
1,041,729	+				+1.4
1,041,729	+				-1.2
1,041,729	+				+0.5
1,041,729	+				-0.9
1,041,729	+				-0.8
1,041,730	-				-0.4
1,041,730	-				-0.7
1,041,730	-				-0.0
1,041,730	-				+0.1
1,041,730	-				-0.0
1,041,730	-				-2.2
1,041,730	-				-1.2
1,041,755	-				-1.5
1,041,782	-				-0.0
1,041,782	-				-1.8
1,041,945	+		LRK53_RS04485	0.11	-1.9
1,041,946	-		LRK53_RS04485	0.11	-1.9
1,041,952	+		LRK53_RS04485	0.12	-1.0
1,041,952	+		LRK53_RS04485	0.12	+0.5
1,041,952	+		LRK53_RS04485	0.12	-0.3
1,041,952	+		LRK53_RS04485	0.12	-1.2
1,041,952	+		LRK53_RS04485	0.12	-0.1
1,041,953	-		LRK53_RS04485	0.12	-3.6
1,041,953	-		LRK53_RS04485	0.12	-1.5
1,041,953	-		LRK53_RS04485	0.12	-0.9
1,041,953	-		LRK53_RS04485	0.12	-1.5
1,041,953	-		LRK53_RS04485	0.12	-0.5
1,041,953	-		LRK53_RS04485	0.12	-1.1
1,042,229	-		LRK53_RS04485	0.42	+0.2
1,042,359	+		LRK53_RS04485	0.56	+0.6
1,042,359	+		LRK53_RS04485	0.56	-1.4
1,042,359	+		LRK53_RS04485	0.56	-0.8
1,042,359	+		LRK53_RS04485	0.56	-1.3
1,042,359	+		LRK53_RS04485	0.56	-1.2
1,042,359	+		LRK53_RS04485	0.56	-0.8
1,042,359	+		LRK53_RS04485	0.56	-0.9
1,042,359	+		LRK53_RS04485	0.56	+0.6
1,042,359	+		LRK53_RS04485	0.56	-2.3
1,042,359	+		LRK53_RS04485	0.56	-0.3
1,042,359	+		LRK53_RS04485	0.56	-1.6
1,042,359	+		LRK53_RS04485	0.56	-1.9
1,042,359	+		LRK53_RS04485	0.56	-0.4
1,042,359	+		LRK53_RS04485	0.56	-0.7
1,042,359	+		LRK53_RS04485	0.56	-1.3
1,042,359	+		LRK53_RS04485	0.56	+0.6
1,042,359	+		LRK53_RS04485	0.56	-1.2
1,042,359	+		LRK53_RS04485	0.56	-2.6
1,042,359	+		LRK53_RS04485	0.56	-0.2
1,042,359	+		LRK53_RS04485	0.56	-1.0
1,042,359	+		LRK53_RS04485	0.56	-0.7
1,042,360	-		LRK53_RS04485	0.56	-1.7
1,042,360	-		LRK53_RS04485	0.56	-2.9
1,042,360	-		LRK53_RS04485	0.56	-1.2
1,042,360	-		LRK53_RS04485	0.56	-0.8
1,042,360	-		LRK53_RS04485	0.56	-0.2
1,042,360	-		LRK53_RS04485	0.56	-1.9
1,042,360	-		LRK53_RS04485	0.56	-0.7
1,042,360	-		LRK53_RS04485	0.56	+0.2
1,042,360	-		LRK53_RS04485	0.56	-0.7
1,042,360	-		LRK53_RS04485	0.56	+0.0
1,042,360	-		LRK53_RS04485	0.56	-1.7
1,042,360	-		LRK53_RS04485	0.56	-1.3
1,042,360	-		LRK53_RS04485	0.56	-0.7
1,042,360	-		LRK53_RS04485	0.56	-0.0
1,042,360	-		LRK53_RS04485	0.56	-2.4
1,042,360	-		LRK53_RS04485	0.56	-3.1
1,042,360	-		LRK53_RS04485	0.56	-1.1
1,042,360	-		LRK53_RS04485	0.56	-2.1
1,042,360	-		LRK53_RS04485	0.56	-1.3
1,042,360	-		LRK53_RS04485	0.56	-0.2
1,042,360	-		LRK53_RS04485	0.56	+0.2
1,042,360	-		LRK53_RS04485	0.56	-1.6
1,042,360	-		LRK53_RS04485	0.56	-0.0
1,042,360	-		LRK53_RS04485	0.56	-2.2
1,042,363	+		LRK53_RS04485	0.57	-1.7
1,042,363	+		LRK53_RS04485	0.57	-1.1
1,042,363	+		LRK53_RS04485	0.57	-1.6
1,042,363	+		LRK53_RS04485	0.57	+1.2
1,042,363	+		LRK53_RS04485	0.57	-0.6
1,042,363	+		LRK53_RS04485	0.57	-0.7
1,042,363	+		LRK53_RS04485	0.57	-0.4
1,042,363	+		LRK53_RS04485	0.57	-1.1
1,042,363	+		LRK53_RS04485	0.57	-1.6
1,042,363	+		LRK53_RS04485	0.57	+0.6
1,042,363	+		LRK53_RS04485	0.57	-1.4
1,042,363	+		LRK53_RS04485	0.57	-1.5
1,042,363	+		LRK53_RS04485	0.57	-1.0
1,042,363	+		LRK53_RS04485	0.57	-0.8
1,042,363	+		LRK53_RS04485	0.57	+0.2
1,042,363	+		LRK53_RS04485	0.57	-2.2
1,042,363	+		LRK53_RS04485	0.57	-2.4
1,042,363	+		LRK53_RS04485	0.57	-1.5
1,042,363	+		LRK53_RS04485	0.57	-2.3
1,042,363	+		LRK53_RS04485	0.57	-1.6
1,042,363	+		LRK53_RS04485	0.57	-3.0
1,042,363	+		LRK53_RS04485	0.57	+0.9
1,042,363	+		LRK53_RS04485	0.57	-0.2
1,042,363	+		LRK53_RS04485	0.57	-3.2
1,042,363	+		LRK53_RS04485	0.57	+0.6
1,042,363	+		LRK53_RS04485	0.57	-0.9
1,042,363	+		LRK53_RS04485	0.57	+2.2
1,042,363	+		LRK53_RS04485	0.57	-1.4
1,042,363	+		LRK53_RS04485	0.57	-0.5
1,042,363	+		LRK53_RS04485	0.57	-4.0
1,042,363	+		LRK53_RS04485	0.57	+1.4
1,042,363	+		LRK53_RS04485	0.57	-1.0
1,042,363	+		LRK53_RS04485	0.57	-2.8
1,042,363	+		LRK53_RS04485	0.57	+1.1
1,042,363	+		LRK53_RS04485	0.57	-0.8
1,042,364	-		LRK53_RS04485	0.57	-2.1
1,042,364	-		LRK53_RS04485	0.57	+1.4
1,042,364	-		LRK53_RS04485	0.57	+0.2
1,042,364	-		LRK53_RS04485	0.57	+1.5
1,042,364	-		LRK53_RS04485	0.57	-2.2
1,042,364	-		LRK53_RS04485	0.57	-0.9
1,042,364	-		LRK53_RS04485	0.57	-0.7
1,042,364	-		LRK53_RS04485	0.57	+0.1
1,042,364	-		LRK53_RS04485	0.57	-0.6
1,042,364	-		LRK53_RS04485	0.57	+0.5
1,042,364	-		LRK53_RS04485	0.57	-0.7
1,042,364	-		LRK53_RS04485	0.57	+1.2
1,042,364	-		LRK53_RS04485	0.57	+0.4
1,042,364	-		LRK53_RS04485	0.57	-0.7
1,042,364	-		LRK53_RS04485	0.57	-1.5
1,042,364	-		LRK53_RS04485	0.57	-0.8
1,042,364	-		LRK53_RS04485	0.57	-0.5
1,042,364	-		LRK53_RS04485	0.57	-0.7
1,042,364	-		LRK53_RS04485	0.57	+0.1
1,042,364	-		LRK53_RS04485	0.57	-1.0
1,042,364	-		LRK53_RS04485	0.57	-1.3
1,042,364	-		LRK53_RS04485	0.57	-0.4
1,042,364	-		LRK53_RS04485	0.57	-2.2
1,042,364	-		LRK53_RS04485	0.57	-0.9
1,042,364	-		LRK53_RS04485	0.57	-0.9
1,042,364	-		LRK53_RS04485	0.57	+0.4
1,042,364	-		LRK53_RS04485	0.57	-1.5
1,042,364	-		LRK53_RS04485	0.57	-0.0
1,042,364	-		LRK53_RS04485	0.57	-1.8
1,042,364	-		LRK53_RS04485	0.57	+0.3
1,042,364	-		LRK53_RS04485	0.57	-1.7
1,042,364	-		LRK53_RS04485	0.57	-0.4
1,042,441	+		LRK53_RS04485	0.65	-0.7
1,042,441	+		LRK53_RS04485	0.65	-0.0
1,042,441	+		LRK53_RS04485	0.65	+0.7
1,042,441	+		LRK53_RS04485	0.65	+0.5
1,042,441	+		LRK53_RS04485	0.65	-1.5
1,042,441	+		LRK53_RS04485	0.65	-0.9
1,042,441	+		LRK53_RS04485	0.65	-0.8
1,042,441	+		LRK53_RS04485	0.65	-2.6
1,042,441	+		LRK53_RS04485	0.65	+0.2
1,042,442	-		LRK53_RS04485	0.65	-2.2
1,042,442	-		LRK53_RS04485	0.65	+0.5
1,042,442	-		LRK53_RS04485	0.65	-1.6
1,042,442	-		LRK53_RS04485	0.65	-1.6
1,042,442	-		LRK53_RS04485	0.65	-2.2
1,042,442	-		LRK53_RS04485	0.65	-0.3
1,042,442	-		LRK53_RS04485	0.65	-2.4
1,042,442	-		LRK53_RS04485	0.65	-0.2
1,042,477	+		LRK53_RS04485	0.69	+1.8
1,042,477	+		LRK53_RS04485	0.69	+0.3
1,042,477	+		LRK53_RS04485	0.69	-0.0
1,042,477	+		LRK53_RS04485	0.69	-2.7
1,042,477	+		LRK53_RS04485	0.69	-1.5
1,042,477	+		LRK53_RS04485	0.69	-2.1
1,042,477	+		LRK53_RS04485	0.69	-1.3
1,042,477	+		LRK53_RS04485	0.69	-1.3
1,042,478	-		LRK53_RS04485	0.69	-1.7
1,042,478	-		LRK53_RS04485	0.69	-1.9
1,042,478	-		LRK53_RS04485	0.69	-0.9
1,042,478	-		LRK53_RS04485	0.69	-2.1
1,042,478	-		LRK53_RS04485	0.69	-1.1
1,042,606	+		LRK53_RS04485	0.83	-1.5
1,042,753	+				-1.9
1,042,753	+				+0.3
1,042,753	+				-3.2
1,042,753	+				-0.5
1,042,753	+				-0.0
1,042,754	-				-1.3
1,042,754	-				+0.6
1,042,754	-				-0.4
1,042,754	-				-0.5
1,042,754	-				-0.5
1,042,754	-				-1.1
1,042,754	-				-0.7
1,042,754	-				-2.0
1,042,878	+				-1.1
1,042,879	-				-1.9
1,042,879	-				-0.8
1,042,879	-				-0.7
1,042,879	-				-1.5
1,042,879	-				+1.3
1,042,879	-				-0.7
1,043,032	-		LRK53_RS04490	0.14	-0.4
1,043,037	+		LRK53_RS04490	0.15	-0.2
1,043,037	+		LRK53_RS04490	0.15	+1.2
1,043,037	+		LRK53_RS04490	0.15	-0.6
1,043,037	+		LRK53_RS04490	0.15	-0.0
1,043,038	-		LRK53_RS04490	0.15	-2.6
1,043,038	-		LRK53_RS04490	0.15	-2.0
1,043,094	+		LRK53_RS04490	0.18	-0.6
1,043,094	+		LRK53_RS04490	0.18	-0.4
1,043,094	+		LRK53_RS04490	0.18	-0.7
1,043,094	+		LRK53_RS04490	0.18	-0.0
1,043,094	+		LRK53_RS04490	0.18	-0.6
1,043,094	+		LRK53_RS04490	0.18	-0.1
1,043,094	+		LRK53_RS04490	0.18	-2.8
1,043,094	+		LRK53_RS04490	0.18	-1.4
1,043,094	+		LRK53_RS04490	0.18	-2.0
1,043,094	+		LRK53_RS04490	0.18	-2.9
1,043,094	+		LRK53_RS04490	0.18	-2.6
1,043,094	+		LRK53_RS04490	0.18	-1.7
1,043,094	+		LRK53_RS04490	0.18	-2.0
1,043,094	+		LRK53_RS04490	0.18	-1.2
1,043,094	+		LRK53_RS04490	0.18	-1.5
1,043,094	+		LRK53_RS04490	0.18	-0.4
1,043,094	+		LRK53_RS04490	0.18	-1.9
1,043,094	+		LRK53_RS04490	0.18	-2.9
1,043,094	+		LRK53_RS04490	0.18	-0.9
1,043,094	+		LRK53_RS04490	0.18	+1.4
1,043,094	+		LRK53_RS04490	0.18	-0.2
1,043,095	-		LRK53_RS04490	0.18	-0.7
1,043,095	-		LRK53_RS04490	0.18	+0.4
1,043,095	-		LRK53_RS04490	0.18	-0.3
1,043,095	-		LRK53_RS04490	0.18	-0.9
1,043,095	-		LRK53_RS04490	0.18	-1.6
1,043,095	-		LRK53_RS04490	0.18	-0.7
1,043,095	-		LRK53_RS04490	0.18	-1.2
1,043,095	-		LRK53_RS04490	0.18	-3.2
1,043,189	+		LRK53_RS04490	0.23	+0.1
1,043,189	+		LRK53_RS04490	0.23	-2.8
1,043,189	+		LRK53_RS04490	0.23	-1.9
1,043,189	+		LRK53_RS04490	0.23	-1.1
1,043,189	+		LRK53_RS04490	0.23	-0.1
1,043,189	+		LRK53_RS04490	0.23	-2.1
1,043,189	+		LRK53_RS04490	0.23	-1.1
1,043,189	+		LRK53_RS04490	0.23	-1.2
1,043,189	+		LRK53_RS04490	0.23	-2.2
1,043,189	+		LRK53_RS04490	0.23	-1.9
1,043,189	+		LRK53_RS04490	0.23	+0.8
1,043,189	+		LRK53_RS04490	0.23	+0.4
1,043,189	+		LRK53_RS04490	0.23	-2.1
1,043,189	+		LRK53_RS04490	0.23	-2.0
1,043,189	+		LRK53_RS04490	0.23	-0.0
1,043,189	+		LRK53_RS04490	0.23	-2.1
1,043,189	+		LRK53_RS04490	0.23	-0.6
1,043,189	+		LRK53_RS04490	0.23	-0.1
1,043,189	+		LRK53_RS04490	0.23	-1.2
1,043,189	+		LRK53_RS04490	0.23	+0.8
1,043,189	+		LRK53_RS04490	0.23	-1.6
1,043,189	+		LRK53_RS04490	0.23	-2.2
1,043,189	+		LRK53_RS04490	0.23	-2.3
1,043,189	+		LRK53_RS04490	0.23	-0.2
1,043,189	+		LRK53_RS04490	0.23	+0.2
1,043,189	+		LRK53_RS04490	0.23	-1.5
1,043,189	+		LRK53_RS04490	0.23	-1.2
1,043,189	+		LRK53_RS04490	0.23	-1.8
1,043,190	-		LRK53_RS04490	0.23	-1.6
1,043,190	-		LRK53_RS04490	0.23	-0.2
1,043,190	-		LRK53_RS04490	0.23	-2.8
1,043,190	-		LRK53_RS04490	0.23	+0.5
1,043,190	-		LRK53_RS04490	0.23	-0.5
1,043,190	-		LRK53_RS04490	0.23	-0.5
1,043,190	-		LRK53_RS04490	0.23	-3.7
1,043,190	-		LRK53_RS04490	0.23	-0.4
1,043,190	-		LRK53_RS04490	0.23	-0.3
1,043,190	-		LRK53_RS04490	0.23	-0.7
1,043,190	-		LRK53_RS04490	0.23	-2.3
1,043,190	-		LRK53_RS04490	0.23	-1.0
1,043,190	-		LRK53_RS04490	0.23	-0.4
1,043,190	-		LRK53_RS04490	0.23	+0.6
1,043,190	-		LRK53_RS04490	0.23	-1.2
1,043,190	-		LRK53_RS04490	0.23	-3.2
1,043,190	-		LRK53_RS04490	0.23	-0.6
1,043,190	-		LRK53_RS04490	0.23	-0.4
1,043,190	-		LRK53_RS04490	0.23	-0.1
1,043,190	-		LRK53_RS04490	0.23	-1.8
1,043,190	-		LRK53_RS04490	0.23	+0.3
1,043,190	-		LRK53_RS04490	0.23	-0.6
1,043,190	-		LRK53_RS04490	0.23	-1.4
1,043,190	-		LRK53_RS04490	0.23	-1.6
1,043,191	+		LRK53_RS04490	0.23	-1.0
1,043,193	+		LRK53_RS04490	0.23	-1.1
1,043,193	+		LRK53_RS04490	0.23	-0.6
1,043,193	+		LRK53_RS04490	0.23	-1.9
1,043,193	+		LRK53_RS04490	0.23	-2.0
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