Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04390

Experiment: biofilm; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Aluminum chloride 1mM
1,017,889	+		LRK53_RS04385	0.65	-1.0
1,017,954	-		LRK53_RS04385	0.69	+0.8
1,017,992	-		LRK53_RS04385	0.71	-0.4
1,018,252	+		LRK53_RS04385	0.85	+2.0
1,018,362	+				-0.2
1,018,362	+				+2.4
1,018,513	+				+0.2
1,018,513	+				+1.2
1,018,522	+				-0.8
1,018,541	+				-0.8
1,018,541	+				-0.5
1,018,541	+				-0.9
1,018,541	+				-0.9
1,018,541	+				-0.6
1,018,541	+				+0.8
1,018,541	+				+0.3
1,018,541	+				+2.3
1,018,542	-				+0.3
1,018,542	-				+2.0
1,018,542	-				-2.5
1,018,542	-				+2.5
1,018,542	-				-0.9
1,018,542	-				-2.1
1,018,542	-				-1.7
1,018,542	-				+1.0
1,018,542	-				-0.2
1,018,542	-				-1.9
1,018,542	-				-2.2
1,018,545	+				-1.3
1,018,546	-				+1.1
1,018,546	-				-0.9
1,018,546	-				-0.1
1,018,546	-				-0.3
1,018,546	-				-0.2
1,018,596	+				-0.9
1,018,596	+				-0.4
1,018,597	-				-0.9
1,018,621	+				-0.1
1,018,621	+				+2.3
1,018,621	+				-0.2
1,018,621	+				+1.7
1,018,621	+				-0.1
1,018,621	+				+0.3
1,018,621	+				+1.2
1,018,621	+				+1.8
1,018,621	+				-0.2
1,018,621	+				+0.3
1,018,621	+				+2.3
1,018,621	+				+2.1
1,018,621	+				+1.2
1,018,622	-				-1.4
1,018,622	-				-0.8
1,018,622	-				-1.1
1,018,622	-				+1.8
1,018,622	-				-0.4
1,018,622	-				-1.9
1,018,622	-				-1.6
1,018,622	-				+1.6
1,018,622	-				-1.1
1,018,622	-				-0.2
1,018,622	-				-2.3
1,018,629	+				+1.2
1,018,629	+				-1.3
1,018,629	+				-0.8
1,018,629	+				+0.2
1,018,629	+				-0.8
1,018,629	+				-0.6
1,018,629	+				-0.5
1,018,630	-				-2.5
1,018,630	-				-0.8
1,018,630	-				-0.5
1,018,630	-				-0.2
1,018,650	-				-0.2
1,018,657	+				-0.7
1,018,657	+				-0.4
1,018,657	+				-0.1
1,018,851	+				-0.2
1,018,900	+		LRK53_RS04390	0.10	-0.0
1,018,900	+		LRK53_RS04390	0.10	+0.2
1,019,107	+		LRK53_RS04390	0.19	-0.0
1,019,108	-		LRK53_RS04390	0.19	-0.5
1,019,108	-		LRK53_RS04390	0.19	-0.5
1,019,108	-		LRK53_RS04390	0.19	-0.4
1,019,283	-		LRK53_RS04390	0.27	-0.5
1,019,408	+		LRK53_RS04390	0.32	-0.7
1,019,438	+		LRK53_RS04390	0.33	-0.0
1,019,438	+		LRK53_RS04390	0.33	+0.5
1,019,439	-		LRK53_RS04390	0.33	+0.2
1,019,495	-		LRK53_RS04390	0.36	-1.2
1,019,641	+		LRK53_RS04390	0.42	-0.0
1,019,642	-		LRK53_RS04390	0.42	+0.2
1,019,642	-		LRK53_RS04390	0.42	-0.5
1,019,642	-		LRK53_RS04390	0.42	-0.8
1,019,849	-		LRK53_RS04390	0.51	-0.5
1,019,866	+		LRK53_RS04390	0.52	-0.2
1,019,866	+		LRK53_RS04390	0.52	+0.2
1,019,866	+		LRK53_RS04390	0.52	+0.2
1,019,867	-		LRK53_RS04390	0.52	-0.4
1,020,256	-		LRK53_RS04390	0.68	+0.2
1,020,476	-		LRK53_RS04390	0.78	-0.2
1,020,767	-				-0.2
1,020,886	+				+2.5
1,020,886	+				-0.4
1,020,887	-				-0.0
1,020,887	-				-1.8
1,020,887	-				-0.8
1,020,932	+				-0.9
1,020,933	-				-0.8
1,021,160	+		LRK53_RS04395	0.14	-0.0
1,021,160	+		LRK53_RS04395	0.14	-0.1
1,021,160	+		LRK53_RS04395	0.14	-0.7
1,021,160	+		LRK53_RS04395	0.14	-1.3
1,021,160	+		LRK53_RS04395	0.14	-0.6
1,021,160	+		LRK53_RS04395	0.14	+0.4
1,021,160	+		LRK53_RS04395	0.14	-3.0
1,021,161	-		LRK53_RS04395	0.14	+0.2
1,021,161	-		LRK53_RS04395	0.14	-0.0
1,021,161	-		LRK53_RS04395	0.14	-0.5
1,021,161	-		LRK53_RS04395	0.14	-1.0
1,021,161	-		LRK53_RS04395	0.14	-0.9
1,021,161	-		LRK53_RS04395	0.14	-0.4
1,021,161	-		LRK53_RS04395	0.14	-2.6
1,021,179	+		LRK53_RS04395	0.17	+0.5
1,021,179	+		LRK53_RS04395	0.17	-1.9
1,021,180	-		LRK53_RS04395	0.17	-0.8
1,021,180	-		LRK53_RS04395	0.17	+1.3
1,021,180	-		LRK53_RS04395	0.17	-2.4
1,021,180	-		LRK53_RS04395	0.17	-1.0
1,021,266	+		LRK53_RS04395	0.32	-1.9
1,021,267	-		LRK53_RS04395	0.32	-1.4
1,021,283	+		LRK53_RS04395	0.35	-0.8
1,021,283	+		LRK53_RS04395	0.35	-2.7
1,021,283	+		LRK53_RS04395	0.35	+2.3
1,021,283	+		LRK53_RS04395	0.35	-0.0
1,021,283	+		LRK53_RS04395	0.35	-0.0
1,021,283	+		LRK53_RS04395	0.35	-1.1
1,021,283	+		LRK53_RS04395	0.35	-1.3
1,021,283	+		LRK53_RS04395	0.35	-0.0
1,021,283	+		LRK53_RS04395	0.35	-0.2
1,021,283	+		LRK53_RS04395	0.35	+0.7
1,021,283	+		LRK53_RS04395	0.35	-0.2
1,021,283	+		LRK53_RS04395	0.35	+3.2
1,021,283	+		LRK53_RS04395	0.35	-1.1
1,021,283	+		LRK53_RS04395	0.35	+2.3
1,021,284	-		LRK53_RS04395	0.35	-0.5
1,021,284	-		LRK53_RS04395	0.35	+1.8
1,021,284	-		LRK53_RS04395	0.35	-0.7
1,021,284	-		LRK53_RS04395	0.35	+0.2
1,021,284	-		LRK53_RS04395	0.35	-0.8
1,021,284	-		LRK53_RS04395	0.35	-0.2
1,021,284	-		LRK53_RS04395	0.35	-2.7
1,021,284	-		LRK53_RS04395	0.35	-1.1
1,021,494	+		LRK53_RS04395	0.72	+1.1
1,021,494	+		LRK53_RS04395	0.72	+1.0
1,021,494	+		LRK53_RS04395	0.72	-0.4
1,021,495	-		LRK53_RS04395	0.72	-0.8
1,021,495	-		LRK53_RS04395	0.72	-0.2
1,021,504	+		LRK53_RS04395	0.73	+1.0
1,021,504	+		LRK53_RS04395	0.73	+1.1
1,021,504	+		LRK53_RS04395	0.73	+0.4
1,021,504	+		LRK53_RS04395	0.73	+0.6
1,021,505	-		LRK53_RS04395	0.74	+0.2
1,021,512	+		LRK53_RS04395	0.75	-0.2
1,021,558	-		LRK53_RS04395	0.83	+1.5
1,021,638	-				+0.0
1,021,648	+				-0.7
1,021,648	+				+0.2
1,021,648	+				-1.0
1,021,648	+				+1.5
1,021,648	+				+0.3
1,021,648	+				-1.3
1,021,648	+				+0.2
1,021,648	+				-0.2
1,021,649	-				-0.4
1,021,649	-				+0.0
1,021,656	+				+0.8
1,021,656	+				+0.0
1,021,657	-				-1.0
1,021,657	-				+1.4
1,021,657	-				+1.5
1,021,672	-				-0.2
1,021,685	-				-0.6
1,021,685	-				+0.8
1,021,685	-				-0.8
1,021,685	-				-1.5
1,021,685	-				-1.7
1,021,685	-				-0.8
1,021,695	+				+1.8
1,021,695	+				+1.2
1,021,695	+				+0.2
1,021,695	+				+2.6
1,021,695	+				+0.2
1,021,695	+				+0.2
1,021,695	+				+0.2
1,021,695	+				-0.7
1,021,695	+				+0.0
1,021,695	+				+1.8
1,021,695	+				+2.5
1,021,696	-				-0.4
1,021,696	-				+0.2
1,021,696	-				+0.8
1,021,696	-				-0.9
1,021,696	-				-1.0
1,021,701	-				-1.4
1,021,701	-				+1.2
1,021,701	-				+1.5
1,021,701	-				-2.6
1,021,701	-				-1.6
1,021,712	+				+0.5
1,021,713	-				+3.0
1,021,723	+				+1.2
1,021,829	+				+1.4
1,021,835	-				-2.7
1,021,839	-				+1.3
1,021,890	-				-1.5
1,021,897	+				-1.3
1,021,899	+				-2.7