Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS04485

Experiment: LB_noSalt with Chloride 200 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntQEN71_RS04480 and QEN71_RS04485 are separated by 91 nucleotidesQEN71_RS04485 and QEN71_RS04490 are separated by 15 nucleotides QEN71_RS04480: QEN71_RS04480 - molybdopterin-binding protein, at 984,003 to 985,298 _RS04480 QEN71_RS04485: QEN71_RS04485 - molybdenum cofactor guanylyltransferase MobA, at 985,390 to 986,004 _RS04485 QEN71_RS04490: QEN71_RS04490 - GTP 3',8-cyclase MoaA, at 986,020 to 987,132 _RS04490 Position (kb) 985 986 987Strain fitness (log2 ratio) -2 -1 0 1 2at 984.459 kb on + strand, within QEN71_RS04480at 984.459 kb on + strand, within QEN71_RS04480at 984.459 kb on + strand, within QEN71_RS04480at 984.459 kb on + strand, within QEN71_RS04480at 984.459 kb on + strand, within QEN71_RS04480at 984.459 kb on + strand, within QEN71_RS04480at 984.460 kb on - strand, within QEN71_RS04480at 984.460 kb on - strand, within QEN71_RS04480at 984.460 kb on - strand, within QEN71_RS04480at 984.460 kb on - strand, within QEN71_RS04480at 984.460 kb on - strand, within QEN71_RS04480at 984.460 kb on - strand, within QEN71_RS04480at 984.460 kb on - strand, within QEN71_RS04480at 984.460 kb on - strand, within QEN71_RS04480at 984.460 kb on - strand, within QEN71_RS04480at 984.460 kb on - strand, within QEN71_RS04480at 984.460 kb on - strand, within QEN71_RS04480at 984.460 kb on - strand, within QEN71_RS04480at 984.460 kb on - strand, within QEN71_RS04480at 984.460 kb on - strand, within QEN71_RS04480at 984.634 kb on + strand, within QEN71_RS04480at 984.634 kb on + strand, within QEN71_RS04480at 984.635 kb on - strand, within QEN71_RS04480at 984.635 kb on - strand, within QEN71_RS04480at 984.635 kb on - strand, within QEN71_RS04480at 984.635 kb on - strand, within QEN71_RS04480at 984.649 kb on + strand, within QEN71_RS04480at 984.649 kb on + strand, within QEN71_RS04480at 984.650 kb on - strand, within QEN71_RS04480at 984.650 kb on - strand, within QEN71_RS04480at 984.860 kb on + strand, within QEN71_RS04480at 984.860 kb on + strand, within QEN71_RS04480at 984.861 kb on - strand, within QEN71_RS04480at 984.861 kb on - strand, within QEN71_RS04480at 985.103 kb on + strand, within QEN71_RS04480at 985.103 kb on + strand, within QEN71_RS04480at 985.103 kb on + strand, within QEN71_RS04480at 985.103 kb on + strand, within QEN71_RS04480at 985.103 kb on + strand, within QEN71_RS04480at 985.104 kb on - strand, within QEN71_RS04480at 985.104 kb on - strand, within QEN71_RS04480at 985.104 kb on - strand, within QEN71_RS04480at 985.104 kb on - strand, within QEN71_RS04480at 985.104 kb on - strand, within QEN71_RS04480at 985.258 kb on + strandat 985.258 kb on + strandat 985.259 kb on - strandat 985.259 kb on - strandat 985.259 kb on - strandat 985.259 kb on - strandat 985.431 kb on + strandat 985.431 kb on + strandat 985.431 kb on + strandat 985.431 kb on + strandat 985.431 kb on + strandat 985.431 kb on + strandat 985.431 kb on + strandat 985.432 kb on - strandat 985.432 kb on - strandat 985.432 kb on - strandat 985.432 kb on - strandat 985.432 kb on - strandat 985.432 kb on - strandat 985.432 kb on - strandat 985.432 kb on - strandat 985.436 kb on + strandat 985.436 kb on + strandat 985.436 kb on + strandat 985.436 kb on + strandat 985.436 kb on + strandat 985.437 kb on - strandat 985.437 kb on - strandat 985.437 kb on - strandat 985.437 kb on - strandat 985.437 kb on - strandat 985.437 kb on - strandat 985.487 kb on + strand, within QEN71_RS04485at 985.488 kb on - strand, within QEN71_RS04485at 985.621 kb on - strand, within QEN71_RS04485at 985.621 kb on - strand, within QEN71_RS04485at 985.776 kb on + strand, within QEN71_RS04485at 985.776 kb on + strand, within QEN71_RS04485at 986.021 kb on + strandat 986.021 kb on + strandat 986.021 kb on + strandat 986.033 kb on + strandat 986.033 kb on + strandat 986.033 kb on + strandat 986.034 kb on - strandat 986.034 kb on - strandat 986.034 kb on - strandat 986.034 kb on - strandat 986.034 kb on - strandat 986.034 kb on - strandat 986.222 kb on + strand, within QEN71_RS04490at 986.222 kb on + strand, within QEN71_RS04490at 986.222 kb on + strand, within QEN71_RS04490at 986.222 kb on + strand, within QEN71_RS04490at 986.222 kb on + strand, within QEN71_RS04490at 986.222 kb on + strand, within QEN71_RS04490at 986.222 kb on + strand, within QEN71_RS04490at 986.222 kb on + strand, within QEN71_RS04490at 986.222 kb on + strand, within QEN71_RS04490at 986.222 kb on + strand, within QEN71_RS04490at 986.222 kb on + strand, within QEN71_RS04490at 986.222 kb on + strand, within QEN71_RS04490at 986.223 kb on - strand, within QEN71_RS04490at 986.223 kb on - strand, within QEN71_RS04490at 986.223 kb on - strand, within QEN71_RS04490at 986.223 kb on - strand, within QEN71_RS04490at 986.223 kb on - strand, within QEN71_RS04490at 986.223 kb on - strand, within QEN71_RS04490at 986.223 kb on - strand, within QEN71_RS04490at 986.223 kb on - strand, within QEN71_RS04490at 986.462 kb on + strand, within QEN71_RS04490at 986.462 kb on + strand, within QEN71_RS04490at 986.462 kb on + strand, within QEN71_RS04490at 986.462 kb on + strand, within QEN71_RS04490at 986.462 kb on + strand, within QEN71_RS04490at 986.462 kb on + strand, within QEN71_RS04490at 986.462 kb on + strand, within QEN71_RS04490at 986.462 kb on + strand, within QEN71_RS04490at 986.462 kb on + strand, within QEN71_RS04490at 986.463 kb on - strand, within QEN71_RS04490at 986.463 kb on - strand, within QEN71_RS04490at 986.463 kb on - strand, within QEN71_RS04490at 986.463 kb on - strand, within QEN71_RS04490at 986.463 kb on - strand, within QEN71_RS04490at 986.463 kb on - strand, within QEN71_RS04490at 986.463 kb on - strand, within QEN71_RS04490at 986.463 kb on - strand, within QEN71_RS04490at 986.463 kb on - strand, within QEN71_RS04490at 986.463 kb on - strand, within QEN71_RS04490at 986.463 kb on - strand, within QEN71_RS04490at 986.463 kb on - strand, within QEN71_RS04490at 986.463 kb on - strand, within QEN71_RS04490at 986.463 kb on - strand, within QEN71_RS04490at 986.463 kb on - strand, within QEN71_RS04490at 986.650 kb on + strand, within QEN71_RS04490at 986.651 kb on - strand, within QEN71_RS04490at 986.881 kb on + strand, within QEN71_RS04490at 986.881 kb on + strand, within QEN71_RS04490at 986.881 kb on + strand, within QEN71_RS04490at 986.881 kb on + strand, within QEN71_RS04490at 986.882 kb on - strand, within QEN71_RS04490at 986.882 kb on - strand, within QEN71_RS04490at 986.883 kb on + strand, within QEN71_RS04490at 986.883 kb on + strand, within QEN71_RS04490at 986.883 kb on + strand, within QEN71_RS04490at 986.883 kb on + strand, within QEN71_RS04490at 986.883 kb on + strand, within QEN71_RS04490at 986.884 kb on - strand, within QEN71_RS04490at 986.910 kb on - strand, within QEN71_RS04490at 986.942 kb on + strand, within QEN71_RS04490at 986.942 kb on + strand, within QEN71_RS04490at 986.942 kb on + strand, within QEN71_RS04490at 986.942 kb on + strand, within QEN71_RS04490at 986.975 kb on + strand, within QEN71_RS04490at 986.975 kb on + strand, within QEN71_RS04490at 986.975 kb on + strand, within QEN71_RS04490at 986.975 kb on + strand, within QEN71_RS04490at 986.975 kb on + strand, within QEN71_RS04490at 986.976 kb on - strand, within QEN71_RS04490at 986.976 kb on - strand, within QEN71_RS04490at 986.976 kb on - strand, within QEN71_RS04490at 986.976 kb on - strand, within QEN71_RS04490at 986.976 kb on - strand, within QEN71_RS04490at 986.976 kb on - strand, within QEN71_RS04490at 986.976 kb on - strand, within QEN71_RS04490at 986.976 kb on - strand, within QEN71_RS04490

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Per-strain Table

Position Strand Gene LocusTag Fraction LB_noSalt with Chloride 200 mM
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984,459 + QEN71_RS04480 0.35 +1.4
984,459 + QEN71_RS04480 0.35 -0.6
984,459 + QEN71_RS04480 0.35 -1.2
984,459 + QEN71_RS04480 0.35 -0.6
984,459 + QEN71_RS04480 0.35 -1.2
984,459 + QEN71_RS04480 0.35 -1.2
984,460 - QEN71_RS04480 0.35 -2.0
984,460 - QEN71_RS04480 0.35 -0.3
984,460 - QEN71_RS04480 0.35 -0.3
984,460 - QEN71_RS04480 0.35 +1.5
984,460 - QEN71_RS04480 0.35 -0.1
984,460 - QEN71_RS04480 0.35 -1.2
984,460 - QEN71_RS04480 0.35 +0.9
984,460 - QEN71_RS04480 0.35 -0.2
984,460 - QEN71_RS04480 0.35 -1.0
984,460 - QEN71_RS04480 0.35 -0.4
984,460 - QEN71_RS04480 0.35 -0.5
984,460 - QEN71_RS04480 0.35 -0.3
984,460 - QEN71_RS04480 0.35 +0.7
984,460 - QEN71_RS04480 0.35 -0.3
984,634 + QEN71_RS04480 0.49 -0.5
984,634 + QEN71_RS04480 0.49 -0.9
984,635 - QEN71_RS04480 0.49 -0.9
984,635 - QEN71_RS04480 0.49 -0.2
984,635 - QEN71_RS04480 0.49 -0.7
984,635 - QEN71_RS04480 0.49 -0.3
984,649 + QEN71_RS04480 0.50 -0.4
984,649 + QEN71_RS04480 0.50 -0.9
984,650 - QEN71_RS04480 0.50 +0.8
984,650 - QEN71_RS04480 0.50 -1.2
984,860 + QEN71_RS04480 0.66 -1.7
984,860 + QEN71_RS04480 0.66 -0.1
984,861 - QEN71_RS04480 0.66 +0.6
984,861 - QEN71_RS04480 0.66 -0.9
985,103 + QEN71_RS04480 0.85 -0.7
985,103 + QEN71_RS04480 0.85 -0.5
985,103 + QEN71_RS04480 0.85 -0.1
985,103 + QEN71_RS04480 0.85 -0.5
985,103 + QEN71_RS04480 0.85 +0.6
985,104 - QEN71_RS04480 0.85 +0.0
985,104 - QEN71_RS04480 0.85 -0.5
985,104 - QEN71_RS04480 0.85 -0.3
985,104 - QEN71_RS04480 0.85 -1.9
985,104 - QEN71_RS04480 0.85 +0.9
985,258 + -0.8
985,258 + -0.4
985,259 - -0.2
985,259 - -0.5
985,259 - +0.4
985,259 - -0.5
985,431 + +1.4
985,431 + -0.1
985,431 + -0.0
985,431 + -0.5
985,431 + -1.1
985,431 + -0.1
985,431 + +0.9
985,432 - +0.1
985,432 - -1.2
985,432 - -1.2
985,432 - +0.8
985,432 - -1.3
985,432 - -0.1
985,432 - -0.1
985,432 - -0.4
985,436 + -0.9
985,436 + -0.1
985,436 + -1.9
985,436 + +0.1
985,436 + -0.7
985,437 - +0.7
985,437 - +0.0
985,437 - +1.8
985,437 - -0.6
985,437 - -0.5
985,437 - -0.3
985,487 + QEN71_RS04485 0.16 -0.9
985,488 - QEN71_RS04485 0.16 +0.1
985,621 - QEN71_RS04485 0.38 -0.3
985,621 - QEN71_RS04485 0.38 +0.7
985,776 + QEN71_RS04485 0.63 +0.1
985,776 + QEN71_RS04485 0.63 -0.7
986,021 + -0.9
986,021 + -0.6
986,021 + -2.3
986,033 + -0.5
986,033 + -1.0
986,033 + -0.8
986,034 - -1.2
986,034 - -0.3
986,034 - -0.5
986,034 - -0.3
986,034 - -0.3
986,034 - -0.8
986,222 + QEN71_RS04490 0.18 +0.5
986,222 + QEN71_RS04490 0.18 +1.1
986,222 + QEN71_RS04490 0.18 -0.1
986,222 + QEN71_RS04490 0.18 -1.9
986,222 + QEN71_RS04490 0.18 -0.2
986,222 + QEN71_RS04490 0.18 -0.8
986,222 + QEN71_RS04490 0.18 +1.7
986,222 + QEN71_RS04490 0.18 -0.4
986,222 + QEN71_RS04490 0.18 +0.6
986,222 + QEN71_RS04490 0.18 -0.1
986,222 + QEN71_RS04490 0.18 -1.6
986,222 + QEN71_RS04490 0.18 -0.6
986,223 - QEN71_RS04490 0.18 -0.6
986,223 - QEN71_RS04490 0.18 +0.5
986,223 - QEN71_RS04490 0.18 -1.8
986,223 - QEN71_RS04490 0.18 -1.6
986,223 - QEN71_RS04490 0.18 -2.5
986,223 - QEN71_RS04490 0.18 +0.2
986,223 - QEN71_RS04490 0.18 +0.7
986,223 - QEN71_RS04490 0.18 -0.4
986,462 + QEN71_RS04490 0.40 -1.4
986,462 + QEN71_RS04490 0.40 -0.1
986,462 + QEN71_RS04490 0.40 -0.1
986,462 + QEN71_RS04490 0.40 +0.1
986,462 + QEN71_RS04490 0.40 -0.1
986,462 + QEN71_RS04490 0.40 -1.3
986,462 + QEN71_RS04490 0.40 -1.2
986,462 + QEN71_RS04490 0.40 -0.1
986,462 + QEN71_RS04490 0.40 -1.1
986,463 - QEN71_RS04490 0.40 +2.5
986,463 - QEN71_RS04490 0.40 -0.2
986,463 - QEN71_RS04490 0.40 -0.5
986,463 - QEN71_RS04490 0.40 +0.1
986,463 - QEN71_RS04490 0.40 -0.9
986,463 - QEN71_RS04490 0.40 -2.5
986,463 - QEN71_RS04490 0.40 -0.7
986,463 - QEN71_RS04490 0.40 -0.1
986,463 - QEN71_RS04490 0.40 +0.9
986,463 - QEN71_RS04490 0.40 +0.6
986,463 - QEN71_RS04490 0.40 -0.4
986,463 - QEN71_RS04490 0.40 +0.1
986,463 - QEN71_RS04490 0.40 -1.2
986,463 - QEN71_RS04490 0.40 -0.1
986,463 - QEN71_RS04490 0.40 +0.0
986,650 + QEN71_RS04490 0.57 -1.2
986,651 - QEN71_RS04490 0.57 -1.2
986,881 + QEN71_RS04490 0.77 +0.1
986,881 + QEN71_RS04490 0.77 -0.6
986,881 + QEN71_RS04490 0.77 -0.4
986,881 + QEN71_RS04490 0.77 +0.4
986,882 - QEN71_RS04490 0.77 -0.4
986,882 - QEN71_RS04490 0.77 -0.6
986,883 + QEN71_RS04490 0.78 +0.4
986,883 + QEN71_RS04490 0.78 +0.9
986,883 + QEN71_RS04490 0.78 -1.1
986,883 + QEN71_RS04490 0.78 -1.1
986,883 + QEN71_RS04490 0.78 +2.6
986,884 - QEN71_RS04490 0.78 -0.4
986,910 - QEN71_RS04490 0.80 -0.9
986,942 + QEN71_RS04490 0.83 +0.1
986,942 + QEN71_RS04490 0.83 -1.4
986,942 + QEN71_RS04490 0.83 +0.8
986,942 + QEN71_RS04490 0.83 +1.3
986,975 + QEN71_RS04490 0.86 -1.0
986,975 + QEN71_RS04490 0.86 -1.8
986,975 + QEN71_RS04490 0.86 -0.1
986,975 + QEN71_RS04490 0.86 +1.4
986,975 + QEN71_RS04490 0.86 +0.7
986,976 - QEN71_RS04490 0.86 +0.0
986,976 - QEN71_RS04490 0.86 +0.1
986,976 - QEN71_RS04490 0.86 +0.6
986,976 - QEN71_RS04490 0.86 -0.4
986,976 - QEN71_RS04490 0.86 -2.1
986,976 - QEN71_RS04490 0.86 +0.4
986,976 - QEN71_RS04490 0.86 +0.4
986,976 - QEN71_RS04490 0.86 -1.6

Or see this region's nucleotide sequence