Experiment: LB_noSalt with Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS00575 and QEN71_RS00580 are separated by 171 nucleotides QEN71_RS00580 and QEN71_RS00585 are separated by 258 nucleotides
QEN71_RS00575: QEN71_RS00575 - NAD(P)/FAD-dependent oxidoreductase, at 123,820 to 124,926
_RS00575
QEN71_RS00580: QEN71_RS00580 - high-potential iron-sulfur protein, at 125,098 to 125,412
_RS00580
QEN71_RS00585: QEN71_RS00585 - MFS transporter, at 125,671 to 126,981
_RS00585
Position (kb) 125
126 Strain fitness (log2 ratio) -2
-1
0
1
2 at 124.496 kb on - strand, within QEN71_RS00575 at 124.513 kb on + strand, within QEN71_RS00575 at 124.513 kb on + strand, within QEN71_RS00575 at 124.513 kb on + strand, within QEN71_RS00575 at 124.513 kb on + strand, within QEN71_RS00575 at 124.513 kb on + strand, within QEN71_RS00575 at 124.513 kb on + strand, within QEN71_RS00575 at 124.514 kb on - strand, within QEN71_RS00575 at 124.514 kb on - strand, within QEN71_RS00575 at 124.514 kb on - strand, within QEN71_RS00575 at 124.514 kb on - strand, within QEN71_RS00575 at 124.514 kb on - strand, within QEN71_RS00575 at 124.514 kb on - strand, within QEN71_RS00575 at 124.555 kb on + strand, within QEN71_RS00575 at 124.555 kb on + strand, within QEN71_RS00575 at 124.556 kb on - strand, within QEN71_RS00575 at 124.657 kb on + strand, within QEN71_RS00575 at 124.657 kb on + strand, within QEN71_RS00575 at 124.657 kb on + strand, within QEN71_RS00575 at 124.657 kb on + strand, within QEN71_RS00575 at 124.657 kb on + strand, within QEN71_RS00575 at 124.657 kb on + strand, within QEN71_RS00575 at 124.658 kb on - strand, within QEN71_RS00575 at 124.658 kb on - strand, within QEN71_RS00575 at 124.658 kb on - strand, within QEN71_RS00575 at 124.658 kb on - strand, within QEN71_RS00575 at 124.658 kb on - strand, within QEN71_RS00575 at 124.658 kb on - strand, within QEN71_RS00575 at 124.690 kb on + strand, within QEN71_RS00575 at 124.690 kb on + strand, within QEN71_RS00575 at 124.690 kb on + strand, within QEN71_RS00575 at 124.691 kb on - strand, within QEN71_RS00575 at 124.691 kb on - strand, within QEN71_RS00575 at 124.691 kb on - strand, within QEN71_RS00575 at 124.747 kb on + strand, within QEN71_RS00575 at 124.747 kb on + strand, within QEN71_RS00575 at 124.748 kb on - strand, within QEN71_RS00575 at 124.748 kb on - strand, within QEN71_RS00575 at 124.748 kb on - strand, within QEN71_RS00575 at 124.748 kb on - strand, within QEN71_RS00575 at 124.936 kb on - strand at 124.949 kb on + strand at 124.992 kb on + strand at 124.993 kb on - strand at 124.993 kb on - strand at 124.993 kb on - strand at 124.993 kb on - strand at 124.993 kb on - strand at 124.993 kb on - strand at 125.034 kb on + strand at 125.034 kb on + strand at 125.034 kb on + strand at 125.034 kb on + strand at 125.066 kb on + strand at 125.066 kb on + strand at 125.066 kb on + strand at 125.066 kb on + strand at 125.066 kb on + strand at 125.066 kb on + strand at 125.066 kb on + strand at 125.066 kb on + strand at 125.066 kb on + strand at 125.066 kb on + strand at 125.066 kb on + strand at 125.066 kb on + strand at 125.066 kb on + strand at 125.066 kb on + strand at 125.066 kb on + strand at 125.066 kb on + strand at 125.066 kb on + strand at 125.067 kb on - strand at 125.067 kb on - strand at 125.067 kb on - strand at 125.067 kb on - strand at 125.067 kb on - strand at 125.067 kb on - strand at 125.067 kb on - strand at 125.067 kb on - strand at 125.067 kb on - strand at 125.067 kb on - strand at 125.067 kb on - strand at 125.067 kb on - strand at 125.067 kb on - strand at 125.067 kb on - strand at 125.067 kb on - strand at 125.067 kb on - strand at 125.067 kb on - strand at 125.079 kb on + strand at 125.079 kb on + strand at 125.079 kb on + strand at 125.079 kb on + strand at 125.079 kb on + strand at 125.079 kb on + strand at 125.079 kb on + strand at 125.080 kb on - strand at 125.080 kb on - strand at 125.080 kb on - strand at 125.115 kb on + strand at 125.115 kb on + strand at 125.152 kb on - strand, within QEN71_RS00580 at 125.230 kb on + strand, within QEN71_RS00580 at 125.230 kb on + strand, within QEN71_RS00580 at 125.231 kb on - strand, within QEN71_RS00580 at 125.231 kb on - strand, within QEN71_RS00580 at 125.266 kb on + strand, within QEN71_RS00580 at 125.266 kb on + strand, within QEN71_RS00580 at 125.266 kb on + strand, within QEN71_RS00580 at 125.266 kb on + strand, within QEN71_RS00580 at 125.267 kb on - strand, within QEN71_RS00580 at 125.275 kb on + strand, within QEN71_RS00580 at 125.311 kb on + strand, within QEN71_RS00580 at 125.311 kb on + strand, within QEN71_RS00580 at 125.311 kb on + strand, within QEN71_RS00580 at 125.311 kb on + strand, within QEN71_RS00580 at 125.312 kb on - strand, within QEN71_RS00580 at 125.312 kb on - strand, within QEN71_RS00580 at 125.312 kb on - strand, within QEN71_RS00580 at 125.312 kb on - strand, within QEN71_RS00580 at 125.312 kb on - strand, within QEN71_RS00580 at 125.312 kb on - strand, within QEN71_RS00580 at 125.312 kb on - strand, within QEN71_RS00580 at 125.395 kb on + strand at 125.395 kb on + strand at 125.395 kb on + strand at 125.395 kb on + strand at 125.395 kb on + strand at 125.396 kb on - strand at 125.396 kb on - strand at 125.396 kb on - strand at 125.396 kb on - strand at 125.396 kb on - strand at 125.396 kb on - strand at 125.396 kb on - strand at 125.396 kb on - strand at 125.396 kb on - strand at 125.396 kb on - strand at 125.397 kb on + strand at 125.397 kb on + strand at 125.397 kb on + strand at 125.397 kb on + strand at 125.397 kb on + strand at 125.398 kb on - strand at 125.398 kb on - strand at 125.398 kb on - strand at 125.398 kb on - strand at 125.398 kb on - strand at 125.398 kb on - strand at 125.398 kb on - strand at 125.398 kb on - strand at 125.398 kb on - strand at 125.446 kb on + strand at 125.538 kb on + strand at 125.538 kb on + strand at 125.539 kb on - strand at 125.574 kb on + strand at 125.574 kb on + strand at 125.574 kb on + strand at 125.575 kb on - strand at 125.575 kb on - strand at 125.654 kb on - strand at 125.698 kb on - strand at 125.743 kb on + strand at 125.743 kb on + strand at 125.744 kb on - strand at 125.744 kb on - strand at 125.812 kb on + strand, within QEN71_RS00585 at 125.813 kb on - strand, within QEN71_RS00585 at 125.893 kb on + strand, within QEN71_RS00585 at 125.893 kb on + strand, within QEN71_RS00585 at 125.894 kb on - strand, within QEN71_RS00585 at 125.984 kb on - strand, within QEN71_RS00585 at 126.119 kb on - strand, within QEN71_RS00585 at 126.119 kb on - strand, within QEN71_RS00585 at 126.274 kb on + strand, within QEN71_RS00585 at 126.274 kb on + strand, within QEN71_RS00585 at 126.274 kb on + strand, within QEN71_RS00585 at 126.275 kb on - strand, within QEN71_RS00585 at 126.275 kb on - strand, within QEN71_RS00585 at 126.275 kb on - strand, within QEN71_RS00585 at 126.366 kb on + strand, within QEN71_RS00585 at 126.366 kb on + strand, within QEN71_RS00585 at 126.366 kb on + strand, within QEN71_RS00585 at 126.367 kb on - strand, within QEN71_RS00585
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Chloride 200 mM remove 124,496 - QEN71_RS00575 0.61 +0.5 124,513 + QEN71_RS00575 0.63 +0.1 124,513 + QEN71_RS00575 0.63 +0.3 124,513 + QEN71_RS00575 0.63 +0.4 124,513 + QEN71_RS00575 0.63 -0.1 124,513 + QEN71_RS00575 0.63 -0.1 124,513 + QEN71_RS00575 0.63 -0.2 124,514 - QEN71_RS00575 0.63 -0.6 124,514 - QEN71_RS00575 0.63 -0.2 124,514 - QEN71_RS00575 0.63 +0.1 124,514 - QEN71_RS00575 0.63 -1.1 124,514 - QEN71_RS00575 0.63 +0.5 124,514 - QEN71_RS00575 0.63 +0.0 124,555 + QEN71_RS00575 0.66 -0.1 124,555 + QEN71_RS00575 0.66 -0.6 124,556 - QEN71_RS00575 0.66 +0.5 124,657 + QEN71_RS00575 0.76 -0.3 124,657 + QEN71_RS00575 0.76 -0.5 124,657 + QEN71_RS00575 0.76 -0.0 124,657 + QEN71_RS00575 0.76 -0.3 124,657 + QEN71_RS00575 0.76 -0.5 124,657 + QEN71_RS00575 0.76 -0.3 124,658 - QEN71_RS00575 0.76 +0.1 124,658 - QEN71_RS00575 0.76 +1.0 124,658 - QEN71_RS00575 0.76 -1.1 124,658 - QEN71_RS00575 0.76 -0.2 124,658 - QEN71_RS00575 0.76 +0.1 124,658 - QEN71_RS00575 0.76 -1.0 124,690 + QEN71_RS00575 0.79 +0.6 124,690 + QEN71_RS00575 0.79 -1.0 124,690 + QEN71_RS00575 0.79 -0.3 124,691 - QEN71_RS00575 0.79 -0.6 124,691 - QEN71_RS00575 0.79 -0.0 124,691 - QEN71_RS00575 0.79 +0.2 124,747 + QEN71_RS00575 0.84 +1.9 124,747 + QEN71_RS00575 0.84 -1.1 124,748 - QEN71_RS00575 0.84 +0.3 124,748 - QEN71_RS00575 0.84 -0.9 124,748 - QEN71_RS00575 0.84 -0.2 124,748 - QEN71_RS00575 0.84 -0.3 124,936 - +0.2 124,949 + -0.3 124,992 + +0.3 124,993 - -1.0 124,993 - -1.1 124,993 - +1.0 124,993 - -0.3 124,993 - +1.2 124,993 - -0.6 125,034 + -0.8 125,034 + +0.3 125,034 + +0.4 125,034 + -0.5 125,066 + -0.5 125,066 + -1.1 125,066 + +0.9 125,066 + -0.9 125,066 + -0.9 125,066 + +0.1 125,066 + -2.6 125,066 + -0.2 125,066 + -0.2 125,066 + -0.2 125,066 + +0.6 125,066 + +0.1 125,066 + -0.7 125,066 + -0.9 125,066 + +0.1 125,066 + -0.5 125,066 + +0.9 125,067 - -0.4 125,067 - -0.1 125,067 - +0.2 125,067 - +0.1 125,067 - -0.1 125,067 - -0.5 125,067 - -0.2 125,067 - -1.8 125,067 - -0.4 125,067 - +0.3 125,067 - -0.6 125,067 - +0.6 125,067 - +0.2 125,067 - -0.3 125,067 - +0.2 125,067 - -1.7 125,067 - -0.2 125,079 + +0.6 125,079 + +0.2 125,079 + -1.3 125,079 + +1.0 125,079 + -0.2 125,079 + -0.7 125,079 + -0.7 125,080 - +0.7 125,080 - -0.2 125,080 - -0.5 125,115 + -0.2 125,115 + -0.7 125,152 - QEN71_RS00580 0.17 +0.7 125,230 + QEN71_RS00580 0.42 +2.6 125,230 + QEN71_RS00580 0.42 +0.3 125,231 - QEN71_RS00580 0.42 +0.1 125,231 - QEN71_RS00580 0.42 -0.1 125,266 + QEN71_RS00580 0.53 +0.4 125,266 + QEN71_RS00580 0.53 +0.2 125,266 + QEN71_RS00580 0.53 -0.3 125,266 + QEN71_RS00580 0.53 +0.0 125,267 - QEN71_RS00580 0.54 -0.3 125,275 + QEN71_RS00580 0.56 -0.1 125,311 + QEN71_RS00580 0.68 +0.8 125,311 + QEN71_RS00580 0.68 +0.0 125,311 + QEN71_RS00580 0.68 -0.0 125,311 + QEN71_RS00580 0.68 -0.1 125,312 - QEN71_RS00580 0.68 -1.3 125,312 - QEN71_RS00580 0.68 +0.3 125,312 - QEN71_RS00580 0.68 +0.1 125,312 - QEN71_RS00580 0.68 +0.7 125,312 - QEN71_RS00580 0.68 +0.2 125,312 - QEN71_RS00580 0.68 -1.4 125,312 - QEN71_RS00580 0.68 -0.8 125,395 + -0.1 125,395 + -0.1 125,395 + +1.1 125,395 + -0.6 125,395 + -0.7 125,396 - -0.0 125,396 - -0.3 125,396 - -0.4 125,396 - -1.1 125,396 - +0.3 125,396 - -1.3 125,396 - -0.5 125,396 - +0.6 125,396 - +0.2 125,396 - -2.4 125,397 + +0.4 125,397 + -0.2 125,397 + -0.0 125,397 + -0.4 125,397 + -0.6 125,398 - +0.3 125,398 - -0.1 125,398 - -0.8 125,398 - -0.5 125,398 - +0.4 125,398 - -0.7 125,398 - -0.5 125,398 - -1.1 125,398 - +1.3 125,446 + -0.8 125,538 + -2.1 125,538 + +2.3 125,539 - +1.1 125,574 + +1.1 125,574 + +0.6 125,574 + +0.4 125,575 - +0.3 125,575 - +0.5 125,654 - +0.3 125,698 - -1.1 125,743 + +0.5 125,743 + +0.3 125,744 - +1.4 125,744 - -0.3 125,812 + QEN71_RS00585 0.11 +0.6 125,813 - QEN71_RS00585 0.11 -0.0 125,893 + QEN71_RS00585 0.17 -1.1 125,893 + QEN71_RS00585 0.17 -1.7 125,894 - QEN71_RS00585 0.17 -0.4 125,984 - QEN71_RS00585 0.24 -2.7 126,119 - QEN71_RS00585 0.34 +1.1 126,119 - QEN71_RS00585 0.34 -0.4 126,274 + QEN71_RS00585 0.46 -0.5 126,274 + QEN71_RS00585 0.46 +0.1 126,274 + QEN71_RS00585 0.46 -0.5 126,275 - QEN71_RS00585 0.46 -0.6 126,275 - QEN71_RS00585 0.46 +0.2 126,275 - QEN71_RS00585 0.46 -0.4 126,366 + QEN71_RS00585 0.53 -0.5 126,366 + QEN71_RS00585 0.53 -0.6 126,366 + QEN71_RS00585 0.53 -0.9 126,367 - QEN71_RS00585 0.53 +0.3
Or see this region's nucleotide sequence