Experiment: LB_noSalt with Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS42075 and QEN71_RS42080 are separated by 10 nucleotides QEN71_RS42080 and QEN71_RS42085 are separated by 109 nucleotides
QEN71_RS42075: QEN71_RS42075 - efflux RND transporter permease subunit, at 495,952 to 499,005
_RS42075
QEN71_RS42080: QEN71_RS42080 - efflux RND transporter periplasmic adaptor subunit, at 499,016 to 500,167
_RS42080
QEN71_RS42085: QEN71_RS42085 - efflux transporter outer membrane subunit, at 500,277 to 501,875
_RS42085
Position (kb) 499
500
501 Strain fitness (log2 ratio) -1
0
1
2 at 498.371 kb on + strand, within QEN71_RS42075 at 498.371 kb on + strand, within QEN71_RS42075 at 498.371 kb on + strand, within QEN71_RS42075 at 498.372 kb on - strand, within QEN71_RS42075 at 498.372 kb on - strand, within QEN71_RS42075 at 498.372 kb on - strand, within QEN71_RS42075 at 498.372 kb on - strand, within QEN71_RS42075 at 498.372 kb on - strand, within QEN71_RS42075 at 498.587 kb on + strand, within QEN71_RS42075 at 498.587 kb on + strand, within QEN71_RS42075 at 498.710 kb on + strand at 498.711 kb on - strand at 498.768 kb on + strand at 498.768 kb on + strand at 498.769 kb on - strand at 498.769 kb on - strand at 498.770 kb on + strand at 498.770 kb on + strand at 498.771 kb on - strand at 498.854 kb on + strand at 499.017 kb on + strand at 499.018 kb on - strand at 499.278 kb on + strand, within QEN71_RS42080 at 499.278 kb on + strand, within QEN71_RS42080 at 499.536 kb on + strand, within QEN71_RS42080 at 499.537 kb on - strand, within QEN71_RS42080 at 499.537 kb on - strand, within QEN71_RS42080 at 499.548 kb on + strand, within QEN71_RS42080 at 499.548 kb on + strand, within QEN71_RS42080 at 499.599 kb on + strand, within QEN71_RS42080 at 499.600 kb on - strand, within QEN71_RS42080 at 499.600 kb on - strand, within QEN71_RS42080 at 499.783 kb on - strand, within QEN71_RS42080 at 500.108 kb on + strand at 500.199 kb on + strand at 500.200 kb on - strand at 500.200 kb on - strand at 500.470 kb on + strand, within QEN71_RS42085 at 500.470 kb on + strand, within QEN71_RS42085 at 500.471 kb on - strand, within QEN71_RS42085 at 500.746 kb on + strand, within QEN71_RS42085 at 500.747 kb on - strand, within QEN71_RS42085 at 500.755 kb on - strand, within QEN71_RS42085 at 500.785 kb on + strand, within QEN71_RS42085 at 500.786 kb on - strand, within QEN71_RS42085 at 500.812 kb on + strand, within QEN71_RS42085 at 500.812 kb on + strand, within QEN71_RS42085 at 500.812 kb on + strand, within QEN71_RS42085
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM remove 498,371 + QEN71_RS42075 0.79 +0.4 498,371 + QEN71_RS42075 0.79 +1.2 498,371 + QEN71_RS42075 0.79 +1.4 498,372 - QEN71_RS42075 0.79 -0.6 498,372 - QEN71_RS42075 0.79 +0.1 498,372 - QEN71_RS42075 0.79 +1.2 498,372 - QEN71_RS42075 0.79 +0.3 498,372 - QEN71_RS42075 0.79 +0.3 498,587 + QEN71_RS42075 0.86 +0.6 498,587 + QEN71_RS42075 0.86 -1.4 498,710 + +0.7 498,711 - -0.0 498,768 + +0.9 498,768 + +0.3 498,769 - -1.5 498,769 - -1.2 498,770 + +1.0 498,770 + -0.5 498,771 - -0.2 498,854 + -1.4 499,017 + -0.9 499,018 - -0.8 499,278 + QEN71_RS42080 0.23 -0.3 499,278 + QEN71_RS42080 0.23 +0.0 499,536 + QEN71_RS42080 0.45 -1.4 499,537 - QEN71_RS42080 0.45 +0.2 499,537 - QEN71_RS42080 0.45 -0.2 499,548 + QEN71_RS42080 0.46 -0.6 499,548 + QEN71_RS42080 0.46 +0.8 499,599 + QEN71_RS42080 0.51 -0.3 499,600 - QEN71_RS42080 0.51 +0.4 499,600 - QEN71_RS42080 0.51 -1.0 499,783 - QEN71_RS42080 0.67 +0.2 500,108 + +0.1 500,199 + -0.9 500,200 - -1.7 500,200 - -0.6 500,470 + QEN71_RS42085 0.12 -0.2 500,470 + QEN71_RS42085 0.12 -0.4 500,471 - QEN71_RS42085 0.12 -0.2 500,746 + QEN71_RS42085 0.29 +0.8 500,747 - QEN71_RS42085 0.29 -0.7 500,755 - QEN71_RS42085 0.30 +2.0 500,785 + QEN71_RS42085 0.32 -0.3 500,786 - QEN71_RS42085 0.32 +0.6 500,812 + QEN71_RS42085 0.33 -0.9 500,812 + QEN71_RS42085 0.33 +1.0 500,812 + QEN71_RS42085 0.33 -0.5
Or see this region's nucleotide sequence