Experiment: LB_noSalt with Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS40465 and QEN71_RS40470 are separated by 85 nucleotides QEN71_RS40470 and QEN71_RS40475 are separated by 285 nucleotides QEN71_RS40475 and QEN71_RS40480 are separated by 40 nucleotides QEN71_RS40480 and QEN71_RS40485 are separated by 157 nucleotides
QEN71_RS40465: QEN71_RS40465 - GntR family transcriptional regulator, at 152,442 to 153,200
_RS40465
QEN71_RS40470: QEN71_RS40470 - hypothetical protein, at 153,286 to 153,480
_RS40470
QEN71_RS40475: QEN71_RS40475 - IS256 family transposase, at 153,766 to 154,108
_RS40475
QEN71_RS40480: QEN71_RS40480 - IS110 family transposase, at 154,149 to 154,408
_RS40480
QEN71_RS40485: QEN71_RS40485 - transposase, at 154,566 to 155,103
_RS40485
Position (kb) 153
154
155 Strain fitness (log2 ratio) -2
-1
0
1 at 152.801 kb on - strand, within QEN71_RS40465 at 152.831 kb on - strand, within QEN71_RS40465 at 152.831 kb on - strand, within QEN71_RS40465 at 152.904 kb on - strand, within QEN71_RS40465 at 152.965 kb on - strand, within QEN71_RS40465 at 152.966 kb on + strand, within QEN71_RS40465 at 152.967 kb on - strand, within QEN71_RS40465 at 153.050 kb on + strand, within QEN71_RS40465 at 153.054 kb on + strand, within QEN71_RS40465 at 153.076 kb on - strand, within QEN71_RS40465 at 153.076 kb on - strand, within QEN71_RS40465 at 153.076 kb on - strand, within QEN71_RS40465 at 153.077 kb on + strand, within QEN71_RS40465 at 153.118 kb on + strand, within QEN71_RS40465 at 153.274 kb on - strand at 153.275 kb on + strand at 153.281 kb on - strand at 153.491 kb on - strand at 153.544 kb on + strand at 153.545 kb on - strand at 153.545 kb on - strand at 153.545 kb on - strand at 153.564 kb on + strand at 153.597 kb on + strand at 153.598 kb on - strand at 153.957 kb on + strand, within QEN71_RS40475 at 153.958 kb on - strand, within QEN71_RS40475 at 153.958 kb on - strand, within QEN71_RS40475 at 154.144 kb on - strand at 154.180 kb on - strand, within QEN71_RS40480 at 154.344 kb on + strand, within QEN71_RS40480 at 154.344 kb on + strand, within QEN71_RS40480 at 154.853 kb on - strand, within QEN71_RS40485 at 155.056 kb on + strand at 155.056 kb on + strand at 155.056 kb on + strand at 155.057 kb on - strand at 155.057 kb on - strand at 155.057 kb on - strand at 155.057 kb on - strand at 155.065 kb on + strand at 155.065 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM remove 152,801 - QEN71_RS40465 0.47 +1.3 152,831 - QEN71_RS40465 0.51 -0.6 152,831 - QEN71_RS40465 0.51 -1.0 152,904 - QEN71_RS40465 0.61 +0.4 152,965 - QEN71_RS40465 0.69 -0.8 152,966 + QEN71_RS40465 0.69 -0.5 152,967 - QEN71_RS40465 0.69 +0.3 153,050 + QEN71_RS40465 0.80 +0.4 153,054 + QEN71_RS40465 0.81 +1.0 153,076 - QEN71_RS40465 0.84 -0.4 153,076 - QEN71_RS40465 0.84 -1.4 153,076 - QEN71_RS40465 0.84 +1.6 153,077 + QEN71_RS40465 0.84 -0.6 153,118 + QEN71_RS40465 0.89 +0.7 153,274 - -0.9 153,275 + -0.7 153,281 - -1.6 153,491 - -0.4 153,544 + -0.6 153,545 - +0.3 153,545 - +0.1 153,545 - +0.2 153,564 + -0.6 153,597 + -2.6 153,598 - -0.4 153,957 + QEN71_RS40475 0.56 -1.7 153,958 - QEN71_RS40475 0.56 -0.7 153,958 - QEN71_RS40475 0.56 +0.2 154,144 - -0.0 154,180 - QEN71_RS40480 0.12 -0.2 154,344 + QEN71_RS40480 0.75 -0.2 154,344 + QEN71_RS40480 0.75 -0.1 154,853 - QEN71_RS40485 0.53 -1.7 155,056 + -1.7 155,056 + +0.3 155,056 + -0.4 155,057 - -2.0 155,057 - +0.3 155,057 - -0.8 155,057 - -0.2 155,065 + +0.6 155,065 + +0.2
Or see this region's nucleotide sequence