Experiment: LB_noSalt with Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS39080 and QEN71_RS39085 are separated by 732 nucleotides QEN71_RS39085 and QEN71_RS39090 are separated by 150 nucleotides QEN71_RS39090 and QEN71_RS39095 are separated by 117 nucleotides
QEN71_RS39080: QEN71_RS39080 - TMEM175 family protein, at 2,149,791 to 2,150,450
_RS39080
QEN71_RS39085: QEN71_RS39085 - LysR family transcriptional regulator, at 2,151,183 to 2,152,145
_RS39085
QEN71_RS39090: QEN71_RS39090 - SDR family oxidoreductase, at 2,152,296 to 2,153,006
_RS39090
QEN71_RS39095: QEN71_RS39095 - aldolase, at 2,153,124 to 2,153,879
_RS39095
Position (kb)
2151
2152
2153 Strain fitness (log2 ratio)
-1
0
1
2 at 2150.287 kb on + strand, within QEN71_RS39080 at 2150.300 kb on - strand, within QEN71_RS39080 at 2150.300 kb on - strand, within QEN71_RS39080 at 2150.376 kb on + strand, within QEN71_RS39080 at 2150.376 kb on + strand, within QEN71_RS39080 at 2150.459 kb on - strand at 2150.501 kb on - strand at 2150.538 kb on + strand at 2150.637 kb on + strand at 2150.637 kb on + strand at 2150.820 kb on - strand at 2150.962 kb on + strand at 2151.158 kb on - strand at 2151.158 kb on - strand at 2151.189 kb on - strand at 2151.285 kb on + strand, within QEN71_RS39085 at 2151.468 kb on + strand, within QEN71_RS39085 at 2151.501 kb on + strand, within QEN71_RS39085 at 2151.575 kb on - strand, within QEN71_RS39085 at 2151.628 kb on - strand, within QEN71_RS39085 at 2151.688 kb on - strand, within QEN71_RS39085 at 2151.728 kb on + strand, within QEN71_RS39085 at 2151.796 kb on + strand, within QEN71_RS39085 at 2151.882 kb on - strand, within QEN71_RS39085 at 2151.952 kb on + strand, within QEN71_RS39085 at 2151.953 kb on - strand, within QEN71_RS39085 at 2152.545 kb on + strand, within QEN71_RS39090 at 2152.546 kb on - strand, within QEN71_RS39090 at 2152.546 kb on - strand, within QEN71_RS39090 at 2152.546 kb on - strand, within QEN71_RS39090 at 2152.546 kb on - strand, within QEN71_RS39090 at 2152.624 kb on - strand, within QEN71_RS39090 at 2152.720 kb on + strand, within QEN71_RS39090 at 2153.087 kb on + strand at 2153.088 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM remove 2,150,287 + QEN71_RS39080 0.75 -0.7 2,150,300 - QEN71_RS39080 0.77 +0.6 2,150,300 - QEN71_RS39080 0.77 +1.1 2,150,376 + QEN71_RS39080 0.89 +0.6 2,150,376 + QEN71_RS39080 0.89 -0.5 2,150,459 - -0.4 2,150,501 - -0.6 2,150,538 + -0.1 2,150,637 + -0.8 2,150,637 + +1.1 2,150,820 - +2.2 2,150,962 + -0.6 2,151,158 - +1.5 2,151,158 - +0.2 2,151,189 - +0.5 2,151,285 + QEN71_RS39085 0.11 -0.6 2,151,468 + QEN71_RS39085 0.30 -1.0 2,151,501 + QEN71_RS39085 0.33 +0.4 2,151,575 - QEN71_RS39085 0.41 -0.8 2,151,628 - QEN71_RS39085 0.46 -0.1 2,151,688 - QEN71_RS39085 0.52 +0.2 2,151,728 + QEN71_RS39085 0.57 +0.2 2,151,796 + QEN71_RS39085 0.64 +0.4 2,151,882 - QEN71_RS39085 0.73 -0.1 2,151,952 + QEN71_RS39085 0.80 -0.5 2,151,953 - QEN71_RS39085 0.80 -0.2 2,152,545 + QEN71_RS39090 0.35 -0.9 2,152,546 - QEN71_RS39090 0.35 -0.0 2,152,546 - QEN71_RS39090 0.35 -0.8 2,152,546 - QEN71_RS39090 0.35 +0.2 2,152,546 - QEN71_RS39090 0.35 +0.2 2,152,624 - QEN71_RS39090 0.46 +0.2 2,152,720 + QEN71_RS39090 0.60 -1.0 2,153,087 + -1.1 2,153,088 - -0.3
Or see this region's nucleotide sequence