Experiment: LB_noSalt with Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS37405 and QEN71_RS37410 are separated by 160 nucleotides QEN71_RS37410 and QEN71_RS37415 are separated by 255 nucleotides
QEN71_RS37405: QEN71_RS37405 - winged helix-turn-helix domain-containing protein, at 1,759,574 to 1,762,342
_RS37405
QEN71_RS37410: QEN71_RS37410 - alpha/beta hydrolase, at 1,762,503 to 1,763,495
_RS37410
QEN71_RS37415: QEN71_RS37415 - winged helix-turn-helix domain-containing protein, at 1,763,751 to 1,766,672
_RS37415
Position (kb)
1762
1763
1764 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1761.617 kb on + strand, within QEN71_RS37405 at 1761.618 kb on - strand, within QEN71_RS37405 at 1761.757 kb on - strand, within QEN71_RS37405 at 1761.940 kb on + strand, within QEN71_RS37405 at 1761.940 kb on + strand, within QEN71_RS37405 at 1762.135 kb on + strand at 1762.135 kb on + strand at 1762.135 kb on + strand at 1762.136 kb on - strand at 1762.136 kb on - strand at 1762.136 kb on - strand at 1762.408 kb on - strand at 1762.504 kb on + strand at 1762.582 kb on + strand at 1762.583 kb on - strand at 1762.710 kb on - strand, within QEN71_RS37410 at 1762.712 kb on - strand, within QEN71_RS37410 at 1762.712 kb on - strand, within QEN71_RS37410 at 1762.744 kb on + strand, within QEN71_RS37410 at 1762.744 kb on + strand, within QEN71_RS37410 at 1762.835 kb on - strand, within QEN71_RS37410 at 1762.858 kb on + strand, within QEN71_RS37410 at 1762.858 kb on + strand, within QEN71_RS37410 at 1762.858 kb on + strand, within QEN71_RS37410 at 1762.859 kb on - strand, within QEN71_RS37410 at 1762.859 kb on - strand, within QEN71_RS37410 at 1763.015 kb on - strand, within QEN71_RS37410 at 1763.015 kb on - strand, within QEN71_RS37410 at 1763.107 kb on + strand, within QEN71_RS37410 at 1763.337 kb on + strand, within QEN71_RS37410 at 1763.337 kb on + strand, within QEN71_RS37410 at 1763.337 kb on + strand, within QEN71_RS37410 at 1763.482 kb on + strand at 1763.482 kb on + strand at 1763.483 kb on - strand at 1763.483 kb on - strand at 1763.483 kb on - strand at 1763.483 kb on - strand at 1763.641 kb on + strand at 1763.641 kb on + strand at 1763.651 kb on + strand at 1763.651 kb on + strand at 1763.651 kb on + strand at 1763.651 kb on + strand at 1764.007 kb on - strand at 1764.007 kb on - strand at 1764.234 kb on + strand, within QEN71_RS37415 at 1764.338 kb on + strand, within QEN71_RS37415 at 1764.339 kb on - strand, within QEN71_RS37415 at 1764.367 kb on + strand, within QEN71_RS37415 at 1764.368 kb on - strand, within QEN71_RS37415 at 1764.424 kb on + strand, within QEN71_RS37415 at 1764.465 kb on - strand, within QEN71_RS37415
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM remove 1,761,617 + QEN71_RS37405 0.74 +0.2 1,761,618 - QEN71_RS37405 0.74 -0.8 1,761,757 - QEN71_RS37405 0.79 -0.6 1,761,940 + QEN71_RS37405 0.85 +1.7 1,761,940 + QEN71_RS37405 0.85 -1.7 1,762,135 + -1.3 1,762,135 + +0.5 1,762,135 + -0.3 1,762,136 - +0.2 1,762,136 - +0.4 1,762,136 - -1.1 1,762,408 - +1.0 1,762,504 + -2.6 1,762,582 + +0.7 1,762,583 - +0.3 1,762,710 - QEN71_RS37410 0.21 -0.1 1,762,712 - QEN71_RS37410 0.21 -0.1 1,762,712 - QEN71_RS37410 0.21 +1.3 1,762,744 + QEN71_RS37410 0.24 +1.9 1,762,744 + QEN71_RS37410 0.24 -1.2 1,762,835 - QEN71_RS37410 0.33 +0.6 1,762,858 + QEN71_RS37410 0.36 -1.8 1,762,858 + QEN71_RS37410 0.36 -2.3 1,762,858 + QEN71_RS37410 0.36 -0.1 1,762,859 - QEN71_RS37410 0.36 -0.6 1,762,859 - QEN71_RS37410 0.36 +0.9 1,763,015 - QEN71_RS37410 0.52 +0.2 1,763,015 - QEN71_RS37410 0.52 +0.3 1,763,107 + QEN71_RS37410 0.61 +0.0 1,763,337 + QEN71_RS37410 0.84 +1.8 1,763,337 + QEN71_RS37410 0.84 +0.3 1,763,337 + QEN71_RS37410 0.84 -0.9 1,763,482 + -0.4 1,763,482 + -0.0 1,763,483 - -1.6 1,763,483 - +0.3 1,763,483 - +1.2 1,763,483 - +0.4 1,763,641 + -0.6 1,763,641 + +0.5 1,763,651 + +0.0 1,763,651 + -1.0 1,763,651 + -0.1 1,763,651 + -0.6 1,764,007 - -0.5 1,764,007 - -1.6 1,764,234 + QEN71_RS37415 0.17 +0.5 1,764,338 + QEN71_RS37415 0.20 +0.7 1,764,339 - QEN71_RS37415 0.20 +0.2 1,764,367 + QEN71_RS37415 0.21 -0.1 1,764,368 - QEN71_RS37415 0.21 -0.2 1,764,424 + QEN71_RS37415 0.23 -0.1 1,764,465 - QEN71_RS37415 0.24 -0.4
Or see this region's nucleotide sequence