Experiment: LB_noSalt with Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS36595 and QEN71_RS36600 are separated by 29 nucleotides QEN71_RS36600 and QEN71_RS36605 are separated by 44 nucleotides
QEN71_RS36595: QEN71_RS36595 - sugar ABC transporter permease, at 1,592,896 to 1,593,798
_RS36595
QEN71_RS36600: QEN71_RS36600 - carbohydrate ABC transporter permease, at 1,593,828 to 1,594,679
_RS36600
QEN71_RS36605: QEN71_RS36605 - beta-galactosidase, at 1,594,724 to 1,596,697
_RS36605
Position (kb)
1593
1594
1595 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1593.107 kb on - strand, within QEN71_RS36595 at 1593.107 kb on - strand, within QEN71_RS36595 at 1593.136 kb on + strand, within QEN71_RS36595 at 1593.137 kb on - strand, within QEN71_RS36595 at 1593.214 kb on + strand, within QEN71_RS36595 at 1593.214 kb on + strand, within QEN71_RS36595 at 1593.215 kb on - strand, within QEN71_RS36595 at 1593.316 kb on + strand, within QEN71_RS36595 at 1593.317 kb on - strand, within QEN71_RS36595 at 1593.317 kb on - strand, within QEN71_RS36595 at 1593.385 kb on - strand, within QEN71_RS36595 at 1593.667 kb on + strand, within QEN71_RS36595 at 1593.670 kb on + strand, within QEN71_RS36595 at 1593.670 kb on + strand, within QEN71_RS36595 at 1593.670 kb on + strand, within QEN71_RS36595 at 1593.671 kb on - strand, within QEN71_RS36595 at 1593.671 kb on - strand, within QEN71_RS36595 at 1593.698 kb on - strand, within QEN71_RS36595 at 1593.755 kb on - strand at 1593.831 kb on + strand at 1593.876 kb on + strand at 1593.877 kb on - strand at 1594.017 kb on + strand, within QEN71_RS36600 at 1594.018 kb on - strand, within QEN71_RS36600 at 1594.141 kb on - strand, within QEN71_RS36600 at 1594.261 kb on + strand, within QEN71_RS36600 at 1594.395 kb on + strand, within QEN71_RS36600 at 1594.395 kb on + strand, within QEN71_RS36600 at 1594.396 kb on - strand, within QEN71_RS36600 at 1594.476 kb on + strand, within QEN71_RS36600 at 1594.655 kb on + strand at 1594.686 kb on + strand at 1594.700 kb on + strand at 1594.868 kb on + strand at 1595.022 kb on - strand, within QEN71_RS36605 at 1595.529 kb on - strand, within QEN71_RS36605 at 1595.583 kb on - strand, within QEN71_RS36605
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM remove 1,593,107 - QEN71_RS36595 0.23 -1.1 1,593,107 - QEN71_RS36595 0.23 -0.2 1,593,136 + QEN71_RS36595 0.27 -0.8 1,593,137 - QEN71_RS36595 0.27 -2.2 1,593,214 + QEN71_RS36595 0.35 +0.8 1,593,214 + QEN71_RS36595 0.35 -0.4 1,593,215 - QEN71_RS36595 0.35 +1.6 1,593,316 + QEN71_RS36595 0.47 +0.2 1,593,317 - QEN71_RS36595 0.47 -1.6 1,593,317 - QEN71_RS36595 0.47 +0.7 1,593,385 - QEN71_RS36595 0.54 +0.6 1,593,667 + QEN71_RS36595 0.85 +3.0 1,593,670 + QEN71_RS36595 0.86 +0.7 1,593,670 + QEN71_RS36595 0.86 +0.2 1,593,670 + QEN71_RS36595 0.86 -0.8 1,593,671 - QEN71_RS36595 0.86 +0.0 1,593,671 - QEN71_RS36595 0.86 -1.6 1,593,698 - QEN71_RS36595 0.89 -2.6 1,593,755 - -0.2 1,593,831 + -0.2 1,593,876 + -3.2 1,593,877 - -1.1 1,594,017 + QEN71_RS36600 0.22 -1.2 1,594,018 - QEN71_RS36600 0.22 -0.5 1,594,141 - QEN71_RS36600 0.37 -0.8 1,594,261 + QEN71_RS36600 0.51 -1.7 1,594,395 + QEN71_RS36600 0.67 -1.9 1,594,395 + QEN71_RS36600 0.67 -1.0 1,594,396 - QEN71_RS36600 0.67 +0.2 1,594,476 + QEN71_RS36600 0.76 -0.7 1,594,655 + -0.6 1,594,686 + -0.1 1,594,700 + +0.5 1,594,868 + -0.2 1,595,022 - QEN71_RS36605 0.15 +0.2 1,595,529 - QEN71_RS36605 0.41 +0.4 1,595,583 - QEN71_RS36605 0.44 -0.0
Or see this region's nucleotide sequence