Experiment: LB_noSalt with Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS33910 and QEN71_RS33915 are separated by 83 nucleotides QEN71_RS33915 and QEN71_RS33920 are separated by 122 nucleotides QEN71_RS33920 and QEN71_RS33925 are separated by 326 nucleotides
QEN71_RS33910: QEN71_RS33910 - hypothetical protein, at 924,176 to 924,421
_RS33910
QEN71_RS33915: QEN71_RS33915 - two-component system response regulator NarL, at 924,505 to 925,164
_RS33915
QEN71_RS33920: QEN71_RS33920 - XRE family transcriptional regulator, at 925,287 to 925,928
_RS33920
QEN71_RS33925: QEN71_RS33925 - formyltetrahydrofolate deformylase, at 926,255 to 927,118
_RS33925
Position (kb) 925
926 Strain fitness (log2 ratio) -2
-1
0
1
2 at 924.426 kb on + strand at 924.490 kb on + strand at 924.602 kb on + strand, within QEN71_RS33915 at 924.603 kb on - strand, within QEN71_RS33915 at 924.814 kb on + strand, within QEN71_RS33915 at 924.992 kb on - strand, within QEN71_RS33915 at 925.083 kb on + strand, within QEN71_RS33915 at 925.083 kb on + strand, within QEN71_RS33915 at 925.209 kb on - strand at 925.211 kb on + strand at 925.211 kb on + strand at 925.632 kb on - strand, within QEN71_RS33920 at 925.635 kb on + strand, within QEN71_RS33920 at 925.636 kb on - strand, within QEN71_RS33920 at 925.636 kb on - strand, within QEN71_RS33920 at 925.752 kb on + strand, within QEN71_RS33920 at 925.752 kb on + strand, within QEN71_RS33920 at 925.752 kb on + strand, within QEN71_RS33920 at 925.752 kb on + strand, within QEN71_RS33920 at 925.752 kb on + strand, within QEN71_RS33920 at 925.752 kb on + strand, within QEN71_RS33920 at 925.753 kb on - strand, within QEN71_RS33920 at 925.753 kb on - strand, within QEN71_RS33920 at 925.753 kb on - strand, within QEN71_RS33920 at 925.753 kb on - strand, within QEN71_RS33920 at 925.753 kb on - strand, within QEN71_RS33920 at 925.798 kb on - strand, within QEN71_RS33920 at 925.798 kb on - strand, within QEN71_RS33920 at 926.070 kb on - strand at 926.074 kb on - strand at 926.325 kb on + strand at 926.568 kb on - strand, within QEN71_RS33925 at 926.568 kb on - strand, within QEN71_RS33925 at 926.568 kb on - strand, within QEN71_RS33925 at 926.681 kb on + strand, within QEN71_RS33925 at 926.778 kb on - strand, within QEN71_RS33925 at 926.927 kb on + strand, within QEN71_RS33925 at 926.928 kb on - strand, within QEN71_RS33925
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM remove 924,426 + +1.8 924,490 + -0.2 924,602 + QEN71_RS33915 0.15 +2.2 924,603 - QEN71_RS33915 0.15 -1.2 924,814 + QEN71_RS33915 0.47 +0.9 924,992 - QEN71_RS33915 0.74 -0.3 925,083 + QEN71_RS33915 0.88 -0.1 925,083 + QEN71_RS33915 0.88 -0.4 925,209 - -0.1 925,211 + -1.1 925,211 + -0.8 925,632 - QEN71_RS33920 0.54 +1.7 925,635 + QEN71_RS33920 0.54 -0.1 925,636 - QEN71_RS33920 0.54 -0.7 925,636 - QEN71_RS33920 0.54 +1.1 925,752 + QEN71_RS33920 0.72 -1.4 925,752 + QEN71_RS33920 0.72 -0.6 925,752 + QEN71_RS33920 0.72 +1.2 925,752 + QEN71_RS33920 0.72 -0.8 925,752 + QEN71_RS33920 0.72 +0.2 925,752 + QEN71_RS33920 0.72 +0.7 925,753 - QEN71_RS33920 0.73 +0.3 925,753 - QEN71_RS33920 0.73 +0.3 925,753 - QEN71_RS33920 0.73 +0.8 925,753 - QEN71_RS33920 0.73 +0.1 925,753 - QEN71_RS33920 0.73 -0.8 925,798 - QEN71_RS33920 0.80 -2.4 925,798 - QEN71_RS33920 0.80 -0.1 926,070 - +1.2 926,074 - +0.2 926,325 + -0.1 926,568 - QEN71_RS33925 0.36 -0.7 926,568 - QEN71_RS33925 0.36 -0.1 926,568 - QEN71_RS33925 0.36 +0.2 926,681 + QEN71_RS33925 0.49 +0.1 926,778 - QEN71_RS33925 0.61 +0.4 926,927 + QEN71_RS33925 0.78 -1.3 926,928 - QEN71_RS33925 0.78 -0.8
Or see this region's nucleotide sequence