Experiment: LB_noSalt with Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS32625 and QEN71_RS32630 overlap by 8 nucleotides QEN71_RS32630 and QEN71_RS32635 are separated by 8 nucleotides
QEN71_RS32625: QEN71_RS32625 - efflux RND transporter permease subunit, at 654,289 to 657,531
_RS32625
QEN71_RS32630: QEN71_RS32630 - efflux RND transporter periplasmic adaptor subunit, at 657,524 to 658,762
_RS32630
QEN71_RS32635: QEN71_RS32635 - efflux transporter outer membrane subunit, at 658,771 to 660,270
_RS32635
Position (kb) 657
658
659 Strain fitness (log2 ratio) -1
0
1 at 656.611 kb on + strand, within QEN71_RS32625 at 656.611 kb on + strand, within QEN71_RS32625 at 656.611 kb on + strand, within QEN71_RS32625 at 656.971 kb on + strand, within QEN71_RS32625 at 656.972 kb on - strand, within QEN71_RS32625 at 657.737 kb on + strand, within QEN71_RS32630 at 657.738 kb on - strand, within QEN71_RS32630 at 657.812 kb on + strand, within QEN71_RS32630 at 657.830 kb on + strand, within QEN71_RS32630 at 658.020 kb on + strand, within QEN71_RS32630 at 658.020 kb on + strand, within QEN71_RS32630 at 658.116 kb on + strand, within QEN71_RS32630 at 658.274 kb on + strand, within QEN71_RS32630 at 658.274 kb on + strand, within QEN71_RS32630 at 658.274 kb on + strand, within QEN71_RS32630 at 658.275 kb on - strand, within QEN71_RS32630 at 658.275 kb on - strand, within QEN71_RS32630 at 658.296 kb on - strand, within QEN71_RS32630 at 658.765 kb on - strand at 658.765 kb on - strand at 658.853 kb on - strand at 658.853 kb on - strand at 658.900 kb on + strand at 659.410 kb on + strand, within QEN71_RS32635 at 659.410 kb on + strand, within QEN71_RS32635 at 659.411 kb on - strand, within QEN71_RS32635
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM remove 656,611 + QEN71_RS32625 0.72 -0.0 656,611 + QEN71_RS32625 0.72 +0.2 656,611 + QEN71_RS32625 0.72 +0.3 656,971 + QEN71_RS32625 0.83 -0.3 656,972 - QEN71_RS32625 0.83 -0.1 657,737 + QEN71_RS32630 0.17 +0.1 657,738 - QEN71_RS32630 0.17 +0.6 657,812 + QEN71_RS32630 0.23 +0.1 657,830 + QEN71_RS32630 0.25 +1.6 658,020 + QEN71_RS32630 0.40 +0.0 658,020 + QEN71_RS32630 0.40 +0.6 658,116 + QEN71_RS32630 0.48 +0.2 658,274 + QEN71_RS32630 0.61 -0.6 658,274 + QEN71_RS32630 0.61 -1.0 658,274 + QEN71_RS32630 0.61 -0.3 658,275 - QEN71_RS32630 0.61 -1.1 658,275 - QEN71_RS32630 0.61 +1.0 658,296 - QEN71_RS32630 0.62 -0.4 658,765 - +1.2 658,765 - +0.6 658,853 - +0.1 658,853 - +0.2 658,900 + -0.4 659,410 + QEN71_RS32635 0.43 -0.5 659,410 + QEN71_RS32635 0.43 -0.8 659,411 - QEN71_RS32635 0.43 -0.5
Or see this region's nucleotide sequence