Experiment: LB_noSalt with Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS32610 and QEN71_RS32615 are separated by 137 nucleotides QEN71_RS32615 and QEN71_RS32620 are separated by 12 nucleotides QEN71_RS32620 and QEN71_RS32625 are separated by 237 nucleotides
QEN71_RS32610: QEN71_RS32610 - histone deacetylase family protein, at 651,974 to 653,008
_RS32610
QEN71_RS32615: QEN71_RS32615 - hypothetical protein, at 653,146 to 653,430
_RS32615
QEN71_RS32620: QEN71_RS32620 - CDP-alcohol phosphatidyltransferase family protein, at 653,443 to 654,051
_RS32620
QEN71_RS32625: QEN71_RS32625 - efflux RND transporter permease subunit, at 654,289 to 657,531
_RS32625
Position (kb) 653
654 Strain fitness (log2 ratio) -2
-1
0
1
2 at 652.146 kb on - strand, within QEN71_RS32610 at 652.146 kb on - strand, within QEN71_RS32610 at 652.382 kb on - strand, within QEN71_RS32610 at 652.463 kb on + strand, within QEN71_RS32610 at 652.464 kb on - strand, within QEN71_RS32610 at 652.476 kb on - strand, within QEN71_RS32610 at 652.482 kb on - strand, within QEN71_RS32610 at 652.482 kb on - strand, within QEN71_RS32610 at 652.624 kb on - strand, within QEN71_RS32610 at 652.641 kb on + strand, within QEN71_RS32610 at 652.825 kb on + strand, within QEN71_RS32610 at 652.940 kb on + strand at 652.940 kb on + strand at 652.940 kb on + strand at 652.940 kb on + strand at 652.941 kb on - strand at 652.942 kb on + strand at 652.943 kb on - strand at 652.977 kb on + strand at 652.978 kb on - strand at 652.978 kb on - strand at 652.978 kb on - strand at 652.978 kb on - strand at 652.978 kb on - strand at 652.979 kb on - strand at 653.026 kb on + strand at 653.281 kb on - strand, within QEN71_RS32615 at 653.355 kb on - strand, within QEN71_RS32615 at 653.355 kb on - strand, within QEN71_RS32615 at 653.416 kb on + strand at 653.416 kb on + strand at 653.416 kb on + strand at 653.416 kb on + strand at 653.416 kb on + strand at 653.417 kb on - strand at 653.417 kb on - strand at 653.417 kb on - strand at 653.417 kb on - strand at 653.436 kb on + strand at 653.496 kb on - strand at 653.519 kb on - strand, within QEN71_RS32620 at 653.519 kb on - strand, within QEN71_RS32620 at 653.519 kb on - strand, within QEN71_RS32620 at 653.519 kb on - strand, within QEN71_RS32620 at 653.519 kb on - strand, within QEN71_RS32620 at 653.519 kb on - strand, within QEN71_RS32620 at 653.522 kb on + strand, within QEN71_RS32620 at 653.551 kb on + strand, within QEN71_RS32620 at 653.629 kb on - strand, within QEN71_RS32620 at 653.685 kb on + strand, within QEN71_RS32620 at 653.745 kb on - strand, within QEN71_RS32620 at 653.746 kb on + strand, within QEN71_RS32620 at 653.951 kb on + strand, within QEN71_RS32620 at 653.951 kb on + strand, within QEN71_RS32620 at 653.952 kb on - strand, within QEN71_RS32620 at 653.952 kb on - strand, within QEN71_RS32620 at 653.952 kb on - strand, within QEN71_RS32620 at 654.063 kb on + strand at 654.084 kb on + strand at 654.087 kb on - strand at 654.087 kb on - strand at 654.093 kb on + strand at 654.117 kb on + strand at 654.143 kb on + strand at 654.289 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM remove 652,146 - QEN71_RS32610 0.17 -1.6 652,146 - QEN71_RS32610 0.17 -0.8 652,382 - QEN71_RS32610 0.39 +0.6 652,463 + QEN71_RS32610 0.47 +0.6 652,464 - QEN71_RS32610 0.47 -1.0 652,476 - QEN71_RS32610 0.49 +0.8 652,482 - QEN71_RS32610 0.49 -1.6 652,482 - QEN71_RS32610 0.49 +1.2 652,624 - QEN71_RS32610 0.63 +0.3 652,641 + QEN71_RS32610 0.64 +0.0 652,825 + QEN71_RS32610 0.82 -0.7 652,940 + -0.9 652,940 + -1.3 652,940 + -1.1 652,940 + -0.6 652,941 - +0.1 652,942 + +0.6 652,943 - -0.1 652,977 + -0.7 652,978 - -0.1 652,978 - -1.6 652,978 - +0.4 652,978 - +2.4 652,978 - +0.1 652,979 - -0.8 653,026 + +0.2 653,281 - QEN71_RS32615 0.47 -0.8 653,355 - QEN71_RS32615 0.73 -1.4 653,355 - QEN71_RS32615 0.73 -1.6 653,416 + +0.2 653,416 + +0.9 653,416 + +0.1 653,416 + -0.0 653,416 + -1.3 653,417 - -0.4 653,417 - +0.1 653,417 - -0.5 653,417 - -1.9 653,436 + -0.3 653,496 - +0.0 653,519 - QEN71_RS32620 0.12 -0.4 653,519 - QEN71_RS32620 0.12 -0.3 653,519 - QEN71_RS32620 0.12 +0.6 653,519 - QEN71_RS32620 0.12 -0.5 653,519 - QEN71_RS32620 0.12 -1.0 653,519 - QEN71_RS32620 0.12 -0.9 653,522 + QEN71_RS32620 0.13 -0.9 653,551 + QEN71_RS32620 0.18 -0.1 653,629 - QEN71_RS32620 0.31 -0.9 653,685 + QEN71_RS32620 0.40 +0.3 653,745 - QEN71_RS32620 0.50 -1.2 653,746 + QEN71_RS32620 0.50 +0.6 653,951 + QEN71_RS32620 0.83 -0.1 653,951 + QEN71_RS32620 0.83 -1.8 653,952 - QEN71_RS32620 0.84 -0.1 653,952 - QEN71_RS32620 0.84 -0.9 653,952 - QEN71_RS32620 0.84 -1.1 654,063 + -1.2 654,084 + -0.6 654,087 - +1.2 654,087 - -0.1 654,093 + -0.2 654,117 + -0.0 654,143 + +0.5 654,289 - -0.1
Or see this region's nucleotide sequence