Experiment: LB_noSalt with Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS32195 and QEN71_RS32200 are separated by 32 nucleotides QEN71_RS32200 and QEN71_RS32205 are separated by 83 nucleotides QEN71_RS32205 and QEN71_RS32210 are separated by 226 nucleotides
QEN71_RS32195: QEN71_RS32195 - hypothetical protein, at 565,956 to 566,240
_RS32195
QEN71_RS32200: QEN71_RS32200 - MarR family transcriptional regulator, at 566,273 to 566,719
_RS32200
QEN71_RS32205: QEN71_RS32205 - molybdopterin-dependent oxidoreductase, at 566,803 to 569,322
_RS32205
QEN71_RS32210: QEN71_RS32210 - FAD binding domain-containing protein, at 569,549 to 570,394
_RS32210
Position (kb) 566
567
568
569
570 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 565.820 kb on + strand at 565.820 kb on + strand at 565.821 kb on - strand at 565.833 kb on + strand at 565.855 kb on + strand at 565.855 kb on + strand at 565.911 kb on + strand at 565.911 kb on + strand at 565.920 kb on + strand at 566.012 kb on + strand, within QEN71_RS32195 at 566.012 kb on + strand, within QEN71_RS32195 at 566.013 kb on - strand, within QEN71_RS32195 at 566.062 kb on - strand, within QEN71_RS32195 at 566.206 kb on + strand, within QEN71_RS32195 at 566.207 kb on - strand, within QEN71_RS32195 at 566.342 kb on + strand, within QEN71_RS32200 at 566.343 kb on - strand, within QEN71_RS32200 at 566.343 kb on - strand, within QEN71_RS32200 at 566.352 kb on + strand, within QEN71_RS32200 at 566.352 kb on + strand, within QEN71_RS32200 at 566.353 kb on - strand, within QEN71_RS32200 at 566.353 kb on - strand, within QEN71_RS32200 at 566.353 kb on - strand, within QEN71_RS32200 at 566.353 kb on - strand, within QEN71_RS32200 at 566.353 kb on - strand, within QEN71_RS32200 at 566.655 kb on + strand, within QEN71_RS32200 at 566.697 kb on + strand at 566.697 kb on + strand at 566.725 kb on + strand at 566.726 kb on - strand at 566.731 kb on + strand at 566.732 kb on - strand at 566.732 kb on - strand at 566.744 kb on + strand at 566.745 kb on - strand at 566.861 kb on + strand at 566.861 kb on + strand at 566.861 kb on + strand at 566.861 kb on + strand at 566.862 kb on - strand at 566.862 kb on - strand at 566.862 kb on - strand at 566.862 kb on - strand at 566.862 kb on - strand at 566.862 kb on - strand at 566.862 kb on - strand at 566.900 kb on - strand at 566.937 kb on + strand at 566.937 kb on + strand at 566.951 kb on + strand at 566.952 kb on - strand at 567.003 kb on + strand at 567.169 kb on + strand, within QEN71_RS32205 at 567.169 kb on + strand, within QEN71_RS32205 at 567.169 kb on + strand, within QEN71_RS32205 at 567.169 kb on + strand, within QEN71_RS32205 at 567.170 kb on - strand, within QEN71_RS32205 at 567.170 kb on - strand, within QEN71_RS32205 at 567.233 kb on + strand, within QEN71_RS32205 at 567.268 kb on + strand, within QEN71_RS32205 at 567.314 kb on + strand, within QEN71_RS32205 at 567.609 kb on + strand, within QEN71_RS32205 at 567.610 kb on - strand, within QEN71_RS32205 at 567.829 kb on + strand, within QEN71_RS32205 at 567.829 kb on + strand, within QEN71_RS32205 at 567.829 kb on + strand, within QEN71_RS32205 at 567.829 kb on + strand, within QEN71_RS32205 at 567.830 kb on - strand, within QEN71_RS32205 at 568.023 kb on + strand, within QEN71_RS32205 at 568.023 kb on + strand, within QEN71_RS32205 at 568.024 kb on - strand, within QEN71_RS32205 at 568.024 kb on - strand, within QEN71_RS32205 at 568.070 kb on + strand, within QEN71_RS32205 at 568.070 kb on + strand, within QEN71_RS32205 at 568.070 kb on + strand, within QEN71_RS32205 at 568.070 kb on + strand, within QEN71_RS32205 at 568.070 kb on + strand, within QEN71_RS32205 at 568.071 kb on - strand, within QEN71_RS32205 at 568.071 kb on - strand, within QEN71_RS32205 at 568.071 kb on - strand, within QEN71_RS32205 at 568.071 kb on - strand, within QEN71_RS32205 at 568.071 kb on - strand, within QEN71_RS32205 at 568.071 kb on - strand, within QEN71_RS32205 at 568.106 kb on - strand, within QEN71_RS32205 at 568.255 kb on - strand, within QEN71_RS32205 at 568.361 kb on - strand, within QEN71_RS32205 at 568.383 kb on + strand, within QEN71_RS32205 at 568.383 kb on + strand, within QEN71_RS32205 at 568.384 kb on - strand, within QEN71_RS32205 at 568.442 kb on + strand, within QEN71_RS32205 at 568.443 kb on - strand, within QEN71_RS32205 at 568.496 kb on + strand, within QEN71_RS32205 at 568.496 kb on + strand, within QEN71_RS32205 at 568.496 kb on + strand, within QEN71_RS32205 at 568.497 kb on - strand, within QEN71_RS32205 at 568.497 kb on - strand, within QEN71_RS32205 at 568.497 kb on - strand, within QEN71_RS32205 at 568.497 kb on - strand, within QEN71_RS32205 at 568.497 kb on - strand, within QEN71_RS32205 at 568.538 kb on - strand, within QEN71_RS32205 at 568.603 kb on - strand, within QEN71_RS32205 at 568.603 kb on - strand, within QEN71_RS32205 at 568.603 kb on - strand, within QEN71_RS32205 at 568.805 kb on + strand, within QEN71_RS32205 at 568.805 kb on + strand, within QEN71_RS32205 at 569.133 kb on + strand at 569.134 kb on - strand at 569.134 kb on - strand at 569.134 kb on - strand at 569.221 kb on + strand at 569.222 kb on - strand at 569.222 kb on - strand at 569.222 kb on - strand at 569.222 kb on - strand at 569.301 kb on + strand at 569.301 kb on + strand at 569.301 kb on + strand at 569.302 kb on - strand at 569.302 kb on - strand at 569.302 kb on - strand at 569.302 kb on - strand at 569.302 kb on - strand at 569.302 kb on - strand at 569.302 kb on - strand at 569.325 kb on + strand at 569.361 kb on + strand at 569.361 kb on + strand at 569.550 kb on + strand at 569.550 kb on + strand at 569.550 kb on + strand at 569.551 kb on - strand at 569.551 kb on - strand at 569.551 kb on - strand at 569.843 kb on - strand, within QEN71_RS32210 at 569.843 kb on - strand, within QEN71_RS32210 at 569.917 kb on + strand, within QEN71_RS32210 at 569.917 kb on + strand, within QEN71_RS32210 at 569.918 kb on - strand, within QEN71_RS32210 at 569.918 kb on - strand, within QEN71_RS32210 at 569.918 kb on - strand, within QEN71_RS32210 at 569.918 kb on - strand, within QEN71_RS32210 at 570.075 kb on - strand, within QEN71_RS32210 at 570.075 kb on - strand, within QEN71_RS32210 at 570.231 kb on - strand, within QEN71_RS32210 at 570.273 kb on + strand, within QEN71_RS32210 at 570.274 kb on - strand, within QEN71_RS32210 at 570.274 kb on - strand, within QEN71_RS32210 at 570.292 kb on + strand, within QEN71_RS32210 at 570.293 kb on - strand, within QEN71_RS32210
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM remove 565,820 + +0.4 565,820 + -1.5 565,821 - +0.4 565,833 + +0.1 565,855 + -0.7 565,855 + +1.5 565,911 + -0.2 565,911 + -0.8 565,920 + -1.2 566,012 + QEN71_RS32195 0.20 -0.2 566,012 + QEN71_RS32195 0.20 -0.5 566,013 - QEN71_RS32195 0.20 -2.0 566,062 - QEN71_RS32195 0.37 -0.8 566,206 + QEN71_RS32195 0.88 -2.0 566,207 - QEN71_RS32195 0.88 +0.5 566,342 + QEN71_RS32200 0.15 +2.7 566,343 - QEN71_RS32200 0.16 +3.2 566,343 - QEN71_RS32200 0.16 +2.9 566,352 + QEN71_RS32200 0.18 +2.9 566,352 + QEN71_RS32200 0.18 +2.9 566,353 - QEN71_RS32200 0.18 +2.9 566,353 - QEN71_RS32200 0.18 +2.5 566,353 - QEN71_RS32200 0.18 +3.2 566,353 - QEN71_RS32200 0.18 +2.9 566,353 - QEN71_RS32200 0.18 +3.1 566,655 + QEN71_RS32200 0.85 +2.8 566,697 + +2.8 566,697 + +2.9 566,725 + +3.2 566,726 - +3.2 566,731 + +2.8 566,732 - -1.2 566,732 - +0.8 566,744 + +2.9 566,745 - +2.2 566,861 + +2.3 566,861 + +2.5 566,861 + +2.7 566,861 + +2.9 566,862 - -0.2 566,862 - +1.2 566,862 - -0.8 566,862 - -0.7 566,862 - -0.0 566,862 - -1.0 566,862 - -0.7 566,900 - -2.4 566,937 + -0.4 566,937 + +1.7 566,951 + +2.8 566,952 - +0.2 567,003 + +2.3 567,169 + QEN71_RS32205 0.15 -0.2 567,169 + QEN71_RS32205 0.15 +0.5 567,169 + QEN71_RS32205 0.15 -0.2 567,169 + QEN71_RS32205 0.15 +1.2 567,170 - QEN71_RS32205 0.15 +0.7 567,170 - QEN71_RS32205 0.15 +0.3 567,233 + QEN71_RS32205 0.17 +2.8 567,268 + QEN71_RS32205 0.18 +1.2 567,314 + QEN71_RS32205 0.20 +2.7 567,609 + QEN71_RS32205 0.32 +2.7 567,610 - QEN71_RS32205 0.32 +0.0 567,829 + QEN71_RS32205 0.41 +2.4 567,829 + QEN71_RS32205 0.41 +0.5 567,829 + QEN71_RS32205 0.41 +2.4 567,829 + QEN71_RS32205 0.41 +0.8 567,830 - QEN71_RS32205 0.41 -1.8 568,023 + QEN71_RS32205 0.48 +3.3 568,023 + QEN71_RS32205 0.48 +3.1 568,024 - QEN71_RS32205 0.48 -0.4 568,024 - QEN71_RS32205 0.48 -0.4 568,070 + QEN71_RS32205 0.50 +3.1 568,070 + QEN71_RS32205 0.50 +3.1 568,070 + QEN71_RS32205 0.50 +3.3 568,070 + QEN71_RS32205 0.50 +2.9 568,070 + QEN71_RS32205 0.50 +2.7 568,071 - QEN71_RS32205 0.50 +0.9 568,071 - QEN71_RS32205 0.50 +0.5 568,071 - QEN71_RS32205 0.50 -0.7 568,071 - QEN71_RS32205 0.50 +0.2 568,071 - QEN71_RS32205 0.50 +0.3 568,071 - QEN71_RS32205 0.50 +0.3 568,106 - QEN71_RS32205 0.52 +0.7 568,255 - QEN71_RS32205 0.58 -0.1 568,361 - QEN71_RS32205 0.62 -0.0 568,383 + QEN71_RS32205 0.63 +3.3 568,383 + QEN71_RS32205 0.63 +3.3 568,384 - QEN71_RS32205 0.63 -0.6 568,442 + QEN71_RS32205 0.65 +2.0 568,443 - QEN71_RS32205 0.65 -0.2 568,496 + QEN71_RS32205 0.67 +3.7 568,496 + QEN71_RS32205 0.67 +2.8 568,496 + QEN71_RS32205 0.67 +2.8 568,497 - QEN71_RS32205 0.67 -0.7 568,497 - QEN71_RS32205 0.67 -1.2 568,497 - QEN71_RS32205 0.67 +0.0 568,497 - QEN71_RS32205 0.67 +0.1 568,497 - QEN71_RS32205 0.67 +1.2 568,538 - QEN71_RS32205 0.69 -0.5 568,603 - QEN71_RS32205 0.71 +0.8 568,603 - QEN71_RS32205 0.71 +0.6 568,603 - QEN71_RS32205 0.71 -0.8 568,805 + QEN71_RS32205 0.79 +2.0 568,805 + QEN71_RS32205 0.79 +2.6 569,133 + +2.3 569,134 - +0.4 569,134 - -0.4 569,134 - -2.5 569,221 + +1.0 569,222 - -0.8 569,222 - -1.5 569,222 - +0.3 569,222 - -2.3 569,301 + +2.8 569,301 + +2.7 569,301 + +2.6 569,302 - -1.3 569,302 - +0.9 569,302 - +0.5 569,302 - +1.3 569,302 - -0.4 569,302 - -0.6 569,302 - -0.9 569,325 + +2.7 569,361 + +2.9 569,361 + +3.4 569,550 + +3.0 569,550 + +3.2 569,550 + +3.1 569,551 - +0.6 569,551 - -0.2 569,551 - +1.2 569,843 - QEN71_RS32210 0.35 +0.2 569,843 - QEN71_RS32210 0.35 +0.3 569,917 + QEN71_RS32210 0.43 +2.5 569,917 + QEN71_RS32210 0.43 +2.7 569,918 - QEN71_RS32210 0.44 -0.0 569,918 - QEN71_RS32210 0.44 -1.0 569,918 - QEN71_RS32210 0.44 -1.0 569,918 - QEN71_RS32210 0.44 -0.7 570,075 - QEN71_RS32210 0.62 +0.0 570,075 - QEN71_RS32210 0.62 -0.0 570,231 - QEN71_RS32210 0.81 +0.1 570,273 + QEN71_RS32210 0.86 +2.9 570,274 - QEN71_RS32210 0.86 -0.8 570,274 - QEN71_RS32210 0.86 -0.9 570,292 + QEN71_RS32210 0.88 +2.6 570,293 - QEN71_RS32210 0.88 -1.0
Or see this region's nucleotide sequence