Experiment: LB_noSalt with Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS30460 and QEN71_RS30465 are separated by 44 nucleotides QEN71_RS30465 and QEN71_RS30470 are separated by 3 nucleotides
QEN71_RS30460: QEN71_RS30460 - cation/acetate symporter ActP, at 175,895 to 177,565
_RS30460
QEN71_RS30465: QEN71_RS30465 - cytochrome b/b6 domain-containing protein, at 177,610 to 178,203
_RS30465
QEN71_RS30470: QEN71_RS30470 - nitronate monooxygenase, at 178,207 to 179,196
_RS30470
Position (kb) 177
178
179 Strain fitness (log2 ratio) -2
-1
0
1
2 at 176.632 kb on + strand, within QEN71_RS30460 at 176.638 kb on + strand, within QEN71_RS30460 at 176.639 kb on - strand, within QEN71_RS30460 at 176.639 kb on - strand, within QEN71_RS30460 at 176.822 kb on + strand, within QEN71_RS30460 at 176.823 kb on - strand, within QEN71_RS30460 at 177.564 kb on - strand at 177.609 kb on + strand at 177.609 kb on + strand at 177.609 kb on + strand at 177.609 kb on + strand at 177.610 kb on - strand at 177.610 kb on - strand at 177.839 kb on - strand, within QEN71_RS30465 at 178.122 kb on + strand, within QEN71_RS30465 at 178.123 kb on - strand, within QEN71_RS30465 at 178.290 kb on + strand at 178.291 kb on - strand at 178.469 kb on + strand, within QEN71_RS30470 at 178.528 kb on + strand, within QEN71_RS30470 at 178.529 kb on - strand, within QEN71_RS30470 at 178.529 kb on - strand, within QEN71_RS30470 at 178.871 kb on - strand, within QEN71_RS30470 at 178.942 kb on + strand, within QEN71_RS30470 at 178.942 kb on + strand, within QEN71_RS30470 at 178.942 kb on + strand, within QEN71_RS30470 at 178.943 kb on - strand, within QEN71_RS30470 at 179.057 kb on - strand, within QEN71_RS30470 at 179.188 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM remove 176,632 + QEN71_RS30460 0.44 -0.4 176,638 + QEN71_RS30460 0.44 +0.2 176,639 - QEN71_RS30460 0.45 -0.8 176,639 - QEN71_RS30460 0.45 -0.4 176,822 + QEN71_RS30460 0.55 +0.5 176,823 - QEN71_RS30460 0.56 -0.6 177,564 - -1.0 177,609 + -0.8 177,609 + +0.1 177,609 + -0.4 177,609 + -0.6 177,610 - -1.2 177,610 - -0.6 177,839 - QEN71_RS30465 0.39 +0.2 178,122 + QEN71_RS30465 0.86 -2.7 178,123 - QEN71_RS30465 0.86 -0.5 178,290 + -1.3 178,291 - +2.2 178,469 + QEN71_RS30470 0.26 +0.1 178,528 + QEN71_RS30470 0.32 -0.8 178,529 - QEN71_RS30470 0.33 -0.6 178,529 - QEN71_RS30470 0.33 -0.5 178,871 - QEN71_RS30470 0.67 -0.1 178,942 + QEN71_RS30470 0.74 +0.6 178,942 + QEN71_RS30470 0.74 -0.8 178,942 + QEN71_RS30470 0.74 +0.4 178,943 - QEN71_RS30470 0.74 +1.1 179,057 - QEN71_RS30470 0.86 +0.4 179,188 + -0.9
Or see this region's nucleotide sequence