Experiment: LB_noSalt with Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS28545 and QEN71_RS28550 are separated by 347 nucleotides QEN71_RS28550 and QEN71_RS28555 are separated by 278 nucleotides
QEN71_RS28545: QEN71_RS28545 - YbfB/YjiJ family MFS transporter, at 6,330,216 to 6,331,391
_RS28545
QEN71_RS28550: QEN71_RS28550 - diguanylate cyclase, at 6,331,739 to 6,333,349
_RS28550
QEN71_RS28555: QEN71_RS28555 - GGDEF domain-containing protein, at 6,333,628 to 6,334,578
_RS28555
Position (kb)
6331
6332
6333
6334 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6330.769 kb on + strand, within QEN71_RS28545 at 6330.769 kb on + strand, within QEN71_RS28545 at 6330.769 kb on + strand, within QEN71_RS28545 at 6330.770 kb on - strand, within QEN71_RS28545 at 6330.770 kb on - strand, within QEN71_RS28545 at 6330.824 kb on + strand, within QEN71_RS28545 at 6330.824 kb on + strand, within QEN71_RS28545 at 6330.824 kb on + strand, within QEN71_RS28545 at 6330.825 kb on - strand, within QEN71_RS28545 at 6330.825 kb on - strand, within QEN71_RS28545 at 6331.012 kb on + strand, within QEN71_RS28545 at 6331.012 kb on + strand, within QEN71_RS28545 at 6331.013 kb on - strand, within QEN71_RS28545 at 6331.013 kb on - strand, within QEN71_RS28545 at 6331.015 kb on + strand, within QEN71_RS28545 at 6331.015 kb on + strand, within QEN71_RS28545 at 6331.015 kb on + strand, within QEN71_RS28545 at 6331.015 kb on + strand, within QEN71_RS28545 at 6331.015 kb on + strand, within QEN71_RS28545 at 6331.015 kb on + strand, within QEN71_RS28545 at 6331.015 kb on + strand, within QEN71_RS28545 at 6331.015 kb on + strand, within QEN71_RS28545 at 6331.015 kb on + strand, within QEN71_RS28545 at 6331.016 kb on - strand, within QEN71_RS28545 at 6331.016 kb on - strand, within QEN71_RS28545 at 6331.094 kb on + strand, within QEN71_RS28545 at 6331.094 kb on + strand, within QEN71_RS28545 at 6331.094 kb on + strand, within QEN71_RS28545 at 6331.095 kb on - strand, within QEN71_RS28545 at 6331.095 kb on - strand, within QEN71_RS28545 at 6331.095 kb on - strand, within QEN71_RS28545 at 6331.283 kb on + strand at 6331.283 kb on + strand at 6331.284 kb on - strand at 6331.284 kb on - strand at 6331.351 kb on + strand at 6331.351 kb on + strand at 6331.352 kb on - strand at 6331.457 kb on + strand at 6331.458 kb on - strand at 6331.580 kb on + strand at 6331.580 kb on + strand at 6331.581 kb on - strand at 6331.597 kb on - strand at 6331.604 kb on + strand at 6331.604 kb on + strand at 6331.604 kb on + strand at 6331.604 kb on + strand at 6331.604 kb on + strand at 6331.604 kb on + strand at 6331.604 kb on + strand at 6331.604 kb on + strand at 6331.604 kb on + strand at 6331.604 kb on + strand at 6331.605 kb on - strand at 6331.605 kb on - strand at 6331.605 kb on - strand at 6331.605 kb on - strand at 6331.605 kb on - strand at 6331.605 kb on - strand at 6331.605 kb on - strand at 6331.605 kb on - strand at 6331.605 kb on - strand at 6331.647 kb on + strand at 6331.648 kb on - strand at 6331.692 kb on + strand at 6331.692 kb on + strand at 6331.693 kb on - strand at 6331.693 kb on - strand at 6331.693 kb on - strand at 6331.693 kb on - strand at 6331.693 kb on - strand at 6331.780 kb on + strand at 6331.780 kb on + strand at 6331.898 kb on + strand at 6331.898 kb on + strand at 6331.994 kb on + strand, within QEN71_RS28550 at 6331.995 kb on - strand, within QEN71_RS28550 at 6331.995 kb on - strand, within QEN71_RS28550 at 6331.995 kb on - strand, within QEN71_RS28550 at 6331.995 kb on - strand, within QEN71_RS28550 at 6332.105 kb on + strand, within QEN71_RS28550 at 6332.105 kb on + strand, within QEN71_RS28550 at 6332.120 kb on + strand, within QEN71_RS28550 at 6332.120 kb on + strand, within QEN71_RS28550 at 6332.120 kb on + strand, within QEN71_RS28550 at 6332.120 kb on + strand, within QEN71_RS28550 at 6332.120 kb on + strand, within QEN71_RS28550 at 6332.121 kb on - strand, within QEN71_RS28550 at 6332.121 kb on - strand, within QEN71_RS28550 at 6332.121 kb on - strand, within QEN71_RS28550 at 6332.121 kb on - strand, within QEN71_RS28550 at 6332.121 kb on - strand, within QEN71_RS28550 at 6332.121 kb on - strand, within QEN71_RS28550 at 6332.121 kb on - strand, within QEN71_RS28550 at 6332.121 kb on - strand, within QEN71_RS28550 at 6332.121 kb on - strand, within QEN71_RS28550 at 6332.121 kb on - strand, within QEN71_RS28550 at 6332.201 kb on + strand, within QEN71_RS28550 at 6332.201 kb on + strand, within QEN71_RS28550 at 6332.202 kb on - strand, within QEN71_RS28550 at 6332.202 kb on - strand, within QEN71_RS28550 at 6332.206 kb on + strand, within QEN71_RS28550 at 6332.206 kb on + strand, within QEN71_RS28550 at 6332.207 kb on - strand, within QEN71_RS28550 at 6332.207 kb on - strand, within QEN71_RS28550 at 6332.207 kb on - strand, within QEN71_RS28550 at 6332.207 kb on - strand, within QEN71_RS28550 at 6332.363 kb on + strand, within QEN71_RS28550 at 6332.363 kb on + strand, within QEN71_RS28550 at 6332.363 kb on + strand, within QEN71_RS28550 at 6332.364 kb on - strand, within QEN71_RS28550 at 6332.456 kb on + strand, within QEN71_RS28550 at 6332.457 kb on - strand, within QEN71_RS28550 at 6332.457 kb on - strand, within QEN71_RS28550 at 6332.457 kb on - strand, within QEN71_RS28550 at 6332.457 kb on - strand, within QEN71_RS28550 at 6332.457 kb on - strand, within QEN71_RS28550 at 6332.482 kb on + strand, within QEN71_RS28550 at 6332.482 kb on + strand, within QEN71_RS28550 at 6332.482 kb on + strand, within QEN71_RS28550 at 6332.534 kb on + strand, within QEN71_RS28550 at 6332.534 kb on + strand, within QEN71_RS28550 at 6332.534 kb on + strand, within QEN71_RS28550 at 6332.534 kb on + strand, within QEN71_RS28550 at 6332.534 kb on + strand, within QEN71_RS28550 at 6332.534 kb on + strand, within QEN71_RS28550 at 6332.534 kb on + strand, within QEN71_RS28550 at 6332.534 kb on + strand, within QEN71_RS28550 at 6332.534 kb on + strand, within QEN71_RS28550 at 6332.534 kb on + strand, within QEN71_RS28550 at 6332.534 kb on + strand, within QEN71_RS28550 at 6332.534 kb on + strand, within QEN71_RS28550 at 6332.535 kb on - strand, within QEN71_RS28550 at 6332.535 kb on - strand, within QEN71_RS28550 at 6332.535 kb on - strand, within QEN71_RS28550 at 6332.535 kb on - strand, within QEN71_RS28550 at 6332.535 kb on - strand, within QEN71_RS28550 at 6332.535 kb on - strand, within QEN71_RS28550 at 6332.580 kb on - strand, within QEN71_RS28550 at 6332.924 kb on + strand, within QEN71_RS28550 at 6332.924 kb on + strand, within QEN71_RS28550 at 6332.924 kb on + strand, within QEN71_RS28550 at 6332.924 kb on + strand, within QEN71_RS28550 at 6332.924 kb on + strand, within QEN71_RS28550 at 6332.924 kb on + strand, within QEN71_RS28550 at 6332.924 kb on + strand, within QEN71_RS28550 at 6332.924 kb on + strand, within QEN71_RS28550 at 6332.924 kb on + strand, within QEN71_RS28550 at 6332.925 kb on - strand, within QEN71_RS28550 at 6332.925 kb on - strand, within QEN71_RS28550 at 6332.925 kb on - strand, within QEN71_RS28550 at 6332.925 kb on - strand, within QEN71_RS28550 at 6333.178 kb on + strand, within QEN71_RS28550 at 6333.178 kb on + strand, within QEN71_RS28550 at 6333.179 kb on - strand, within QEN71_RS28550 at 6333.179 kb on - strand, within QEN71_RS28550 at 6333.179 kb on - strand, within QEN71_RS28550 at 6333.179 kb on - strand, within QEN71_RS28550 at 6333.179 kb on - strand, within QEN71_RS28550 at 6333.179 kb on - strand, within QEN71_RS28550 at 6333.218 kb on + strand at 6333.218 kb on + strand at 6333.218 kb on + strand at 6333.218 kb on + strand at 6333.219 kb on - strand at 6333.347 kb on + strand at 6333.347 kb on + strand at 6333.347 kb on + strand at 6333.347 kb on + strand at 6333.347 kb on + strand at 6333.347 kb on + strand at 6333.347 kb on + strand at 6333.348 kb on - strand at 6333.348 kb on - strand at 6333.348 kb on - strand at 6333.348 kb on - strand at 6333.348 kb on - strand at 6333.419 kb on + strand at 6333.419 kb on + strand at 6333.419 kb on + strand at 6333.419 kb on + strand at 6333.419 kb on + strand at 6333.419 kb on + strand at 6333.419 kb on + strand at 6333.420 kb on - strand at 6333.420 kb on - strand at 6333.420 kb on - strand at 6333.420 kb on - strand at 6333.420 kb on - strand at 6333.420 kb on - strand at 6333.420 kb on - strand at 6333.420 kb on - strand at 6333.420 kb on - strand at 6333.451 kb on + strand at 6333.451 kb on + strand at 6333.451 kb on + strand at 6333.451 kb on + strand at 6333.451 kb on + strand at 6333.451 kb on + strand at 6333.451 kb on + strand at 6333.451 kb on + strand at 6333.452 kb on - strand at 6333.452 kb on - strand at 6333.452 kb on - strand at 6333.452 kb on - strand at 6333.452 kb on - strand at 6333.544 kb on - strand at 6333.623 kb on - strand at 6333.623 kb on - strand at 6333.623 kb on - strand at 6333.623 kb on - strand at 6333.718 kb on + strand at 6333.718 kb on + strand at 6333.718 kb on + strand at 6333.718 kb on + strand at 6333.719 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM remove 6,330,769 + QEN71_RS28545 0.47 -0.6 6,330,769 + QEN71_RS28545 0.47 -0.6 6,330,769 + QEN71_RS28545 0.47 -1.4 6,330,770 - QEN71_RS28545 0.47 -0.6 6,330,770 - QEN71_RS28545 0.47 +0.7 6,330,824 + QEN71_RS28545 0.52 -1.9 6,330,824 + QEN71_RS28545 0.52 -1.0 6,330,824 + QEN71_RS28545 0.52 -1.4 6,330,825 - QEN71_RS28545 0.52 -0.3 6,330,825 - QEN71_RS28545 0.52 +1.5 6,331,012 + QEN71_RS28545 0.68 -0.2 6,331,012 + QEN71_RS28545 0.68 -1.7 6,331,013 - QEN71_RS28545 0.68 -1.4 6,331,013 - QEN71_RS28545 0.68 -2.2 6,331,015 + QEN71_RS28545 0.68 -0.9 6,331,015 + QEN71_RS28545 0.68 +0.6 6,331,015 + QEN71_RS28545 0.68 +0.2 6,331,015 + QEN71_RS28545 0.68 -1.5 6,331,015 + QEN71_RS28545 0.68 +0.3 6,331,015 + QEN71_RS28545 0.68 +0.3 6,331,015 + QEN71_RS28545 0.68 -0.2 6,331,015 + QEN71_RS28545 0.68 +1.2 6,331,015 + QEN71_RS28545 0.68 +0.8 6,331,016 - QEN71_RS28545 0.68 +0.4 6,331,016 - QEN71_RS28545 0.68 +0.5 6,331,094 + QEN71_RS28545 0.75 -0.8 6,331,094 + QEN71_RS28545 0.75 -1.2 6,331,094 + QEN71_RS28545 0.75 -1.2 6,331,095 - QEN71_RS28545 0.75 +0.2 6,331,095 - QEN71_RS28545 0.75 -0.1 6,331,095 - QEN71_RS28545 0.75 +0.1 6,331,283 + -0.1 6,331,283 + -0.0 6,331,284 - -0.1 6,331,284 - -0.7 6,331,351 + -0.8 6,331,351 + -1.7 6,331,352 - -0.7 6,331,457 + +0.3 6,331,458 - +0.2 6,331,580 + -0.8 6,331,580 + -1.5 6,331,581 - -1.4 6,331,597 - -0.8 6,331,604 + -1.1 6,331,604 + -0.0 6,331,604 + -0.6 6,331,604 + -0.4 6,331,604 + +0.5 6,331,604 + -0.9 6,331,604 + -0.8 6,331,604 + +1.8 6,331,604 + -1.6 6,331,604 + +0.8 6,331,605 - -0.7 6,331,605 - +0.6 6,331,605 - +0.0 6,331,605 - -0.4 6,331,605 - -0.1 6,331,605 - -1.1 6,331,605 - -0.9 6,331,605 - -0.8 6,331,605 - +0.2 6,331,647 + +0.9 6,331,648 - +0.4 6,331,692 + -0.2 6,331,692 + -1.0 6,331,693 - -0.3 6,331,693 - -0.4 6,331,693 - -0.4 6,331,693 - -1.3 6,331,693 - +0.5 6,331,780 + -0.0 6,331,780 + -0.6 6,331,898 + -2.7 6,331,898 + -0.4 6,331,994 + QEN71_RS28550 0.16 +1.5 6,331,995 - QEN71_RS28550 0.16 -1.8 6,331,995 - QEN71_RS28550 0.16 -0.7 6,331,995 - QEN71_RS28550 0.16 +0.8 6,331,995 - QEN71_RS28550 0.16 -0.1 6,332,105 + QEN71_RS28550 0.23 -0.8 6,332,105 + QEN71_RS28550 0.23 +0.4 6,332,120 + QEN71_RS28550 0.24 -0.4 6,332,120 + QEN71_RS28550 0.24 -0.5 6,332,120 + QEN71_RS28550 0.24 -0.8 6,332,120 + QEN71_RS28550 0.24 -1.4 6,332,120 + QEN71_RS28550 0.24 +0.6 6,332,121 - QEN71_RS28550 0.24 -1.4 6,332,121 - QEN71_RS28550 0.24 +0.3 6,332,121 - QEN71_RS28550 0.24 -0.7 6,332,121 - QEN71_RS28550 0.24 -1.6 6,332,121 - QEN71_RS28550 0.24 +0.5 6,332,121 - QEN71_RS28550 0.24 -0.1 6,332,121 - QEN71_RS28550 0.24 -0.5 6,332,121 - QEN71_RS28550 0.24 -0.7 6,332,121 - QEN71_RS28550 0.24 +1.0 6,332,121 - QEN71_RS28550 0.24 -0.7 6,332,201 + QEN71_RS28550 0.29 -2.0 6,332,201 + QEN71_RS28550 0.29 +0.2 6,332,202 - QEN71_RS28550 0.29 +0.1 6,332,202 - QEN71_RS28550 0.29 -1.8 6,332,206 + QEN71_RS28550 0.29 -0.8 6,332,206 + QEN71_RS28550 0.29 +0.2 6,332,207 - QEN71_RS28550 0.29 +0.1 6,332,207 - QEN71_RS28550 0.29 +0.0 6,332,207 - QEN71_RS28550 0.29 -0.9 6,332,207 - QEN71_RS28550 0.29 +1.2 6,332,363 + QEN71_RS28550 0.39 -0.3 6,332,363 + QEN71_RS28550 0.39 -0.7 6,332,363 + QEN71_RS28550 0.39 -0.0 6,332,364 - QEN71_RS28550 0.39 -0.2 6,332,456 + QEN71_RS28550 0.45 +0.2 6,332,457 - QEN71_RS28550 0.45 -0.9 6,332,457 - QEN71_RS28550 0.45 -0.3 6,332,457 - QEN71_RS28550 0.45 -1.9 6,332,457 - QEN71_RS28550 0.45 +0.2 6,332,457 - QEN71_RS28550 0.45 -0.8 6,332,482 + QEN71_RS28550 0.46 -0.0 6,332,482 + QEN71_RS28550 0.46 -0.6 6,332,482 + QEN71_RS28550 0.46 -0.8 6,332,534 + QEN71_RS28550 0.49 +0.1 6,332,534 + QEN71_RS28550 0.49 +2.0 6,332,534 + QEN71_RS28550 0.49 +0.7 6,332,534 + QEN71_RS28550 0.49 -0.2 6,332,534 + QEN71_RS28550 0.49 -0.1 6,332,534 + QEN71_RS28550 0.49 +1.5 6,332,534 + QEN71_RS28550 0.49 -0.6 6,332,534 + QEN71_RS28550 0.49 +0.6 6,332,534 + QEN71_RS28550 0.49 -0.2 6,332,534 + QEN71_RS28550 0.49 -0.5 6,332,534 + QEN71_RS28550 0.49 -0.5 6,332,534 + QEN71_RS28550 0.49 +0.4 6,332,535 - QEN71_RS28550 0.49 -1.5 6,332,535 - QEN71_RS28550 0.49 -1.1 6,332,535 - QEN71_RS28550 0.49 +0.6 6,332,535 - QEN71_RS28550 0.49 -1.0 6,332,535 - QEN71_RS28550 0.49 +0.6 6,332,535 - QEN71_RS28550 0.49 +0.2 6,332,580 - QEN71_RS28550 0.52 -0.9 6,332,924 + QEN71_RS28550 0.74 -0.0 6,332,924 + QEN71_RS28550 0.74 +0.2 6,332,924 + QEN71_RS28550 0.74 +0.1 6,332,924 + QEN71_RS28550 0.74 +1.7 6,332,924 + QEN71_RS28550 0.74 -1.6 6,332,924 + QEN71_RS28550 0.74 +0.3 6,332,924 + QEN71_RS28550 0.74 +0.5 6,332,924 + QEN71_RS28550 0.74 -1.9 6,332,924 + QEN71_RS28550 0.74 -0.4 6,332,925 - QEN71_RS28550 0.74 +0.1 6,332,925 - QEN71_RS28550 0.74 +0.5 6,332,925 - QEN71_RS28550 0.74 -0.8 6,332,925 - QEN71_RS28550 0.74 +0.2 6,333,178 + QEN71_RS28550 0.89 +0.6 6,333,178 + QEN71_RS28550 0.89 -0.5 6,333,179 - QEN71_RS28550 0.89 -0.2 6,333,179 - QEN71_RS28550 0.89 -1.2 6,333,179 - QEN71_RS28550 0.89 -0.9 6,333,179 - QEN71_RS28550 0.89 +1.2 6,333,179 - QEN71_RS28550 0.89 +0.8 6,333,179 - QEN71_RS28550 0.89 +0.2 6,333,218 + -0.6 6,333,218 + -0.3 6,333,218 + -0.4 6,333,218 + +0.2 6,333,219 - +0.1 6,333,347 + -0.0 6,333,347 + -0.8 6,333,347 + -0.1 6,333,347 + -0.4 6,333,347 + -0.6 6,333,347 + -0.2 6,333,347 + -1.1 6,333,348 - -0.8 6,333,348 - -1.0 6,333,348 - -0.6 6,333,348 - -1.9 6,333,348 - -1.9 6,333,419 + -0.5 6,333,419 + -1.5 6,333,419 + -0.0 6,333,419 + +1.1 6,333,419 + +0.2 6,333,419 + +0.2 6,333,419 + -0.4 6,333,420 - -0.4 6,333,420 - +0.0 6,333,420 - +0.8 6,333,420 - +0.0 6,333,420 - -0.8 6,333,420 - +1.3 6,333,420 - -0.4 6,333,420 - +0.5 6,333,420 - -0.0 6,333,451 + -2.3 6,333,451 + -0.5 6,333,451 + +0.5 6,333,451 + +0.6 6,333,451 + +1.4 6,333,451 + -0.2 6,333,451 + -0.9 6,333,451 + +0.6 6,333,452 - -1.5 6,333,452 - -1.2 6,333,452 - -0.4 6,333,452 - -0.6 6,333,452 - -0.6 6,333,544 - +1.3 6,333,623 - +0.2 6,333,623 - +0.4 6,333,623 - -1.2 6,333,623 - -0.6 6,333,718 + -0.7 6,333,718 + +0.2 6,333,718 + -0.2 6,333,718 + +0.0 6,333,719 - +1.6
Or see this region's nucleotide sequence