Experiment: LB_noSalt with Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS28060 and QEN71_RS28065 are separated by 254 nucleotides QEN71_RS28065 and QEN71_RS28070 are separated by 101 nucleotides QEN71_RS28070 and QEN71_RS28075 are separated by 35 nucleotides QEN71_RS28075 and QEN71_RS28080 are separated by 9 nucleotides
QEN71_RS28060: QEN71_RS28060 - pilus assembly protein PilM, at 6,240,099 to 6,241,058
_RS28060
QEN71_RS28065: QEN71_RS28065 - penicillin-binding protein 1A, at 6,241,313 to 6,243,703
_RS28065
QEN71_RS28070: QEN71_RS28070 - iron donor protein CyaY, at 6,243,805 to 6,244,122
_RS28070
QEN71_RS28075: QEN71_RS28075 - lipoprotein, at 6,244,158 to 6,244,457
_RS28075
QEN71_RS28080: QEN71_RS28080 - diaminopimelate decarboxylase, at 6,244,467 to 6,245,729
_RS28080
Position (kb)
6241
6242
6243
6244 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 6240.355 kb on + strand, within QEN71_RS28060 at 6240.355 kb on + strand, within QEN71_RS28060 at 6240.355 kb on + strand, within QEN71_RS28060 at 6240.356 kb on - strand, within QEN71_RS28060 at 6240.356 kb on - strand, within QEN71_RS28060 at 6240.404 kb on + strand, within QEN71_RS28060 at 6240.415 kb on + strand, within QEN71_RS28060 at 6240.448 kb on + strand, within QEN71_RS28060 at 6240.449 kb on - strand, within QEN71_RS28060 at 6240.449 kb on - strand, within QEN71_RS28060 at 6240.637 kb on + strand, within QEN71_RS28060 at 6240.638 kb on - strand, within QEN71_RS28060 at 6240.638 kb on - strand, within QEN71_RS28060 at 6240.638 kb on - strand, within QEN71_RS28060 at 6240.697 kb on - strand, within QEN71_RS28060 at 6240.752 kb on - strand, within QEN71_RS28060 at 6240.752 kb on - strand, within QEN71_RS28060 at 6240.752 kb on - strand, within QEN71_RS28060 at 6240.752 kb on - strand, within QEN71_RS28060 at 6240.921 kb on - strand, within QEN71_RS28060 at 6241.039 kb on - strand at 6241.075 kb on + strand at 6241.075 kb on + strand at 6241.076 kb on - strand at 6241.076 kb on - strand at 6241.076 kb on - strand at 6241.076 kb on - strand at 6241.076 kb on - strand at 6241.076 kb on - strand at 6241.076 kb on - strand at 6241.105 kb on + strand at 6241.105 kb on + strand at 6241.106 kb on - strand at 6241.106 kb on - strand at 6241.106 kb on - strand at 6241.173 kb on + strand at 6241.174 kb on - strand at 6241.174 kb on - strand at 6241.214 kb on + strand at 6241.214 kb on + strand at 6241.214 kb on + strand at 6241.214 kb on + strand at 6241.214 kb on + strand at 6241.214 kb on + strand at 6241.214 kb on + strand at 6241.214 kb on + strand at 6241.214 kb on + strand at 6241.214 kb on + strand at 6241.214 kb on + strand at 6241.214 kb on + strand at 6241.214 kb on + strand at 6241.214 kb on + strand at 6241.215 kb on - strand at 6241.215 kb on - strand at 6241.215 kb on - strand at 6241.215 kb on - strand at 6241.215 kb on - strand at 6241.215 kb on - strand at 6241.215 kb on - strand at 6241.215 kb on - strand at 6241.215 kb on - strand at 6241.215 kb on - strand at 6241.215 kb on - strand at 6241.215 kb on - strand at 6241.251 kb on - strand at 6241.251 kb on - strand at 6241.251 kb on - strand at 6241.282 kb on + strand at 6241.282 kb on + strand at 6241.282 kb on + strand at 6241.282 kb on + strand at 6241.283 kb on - strand at 6241.283 kb on - strand at 6241.284 kb on + strand at 6241.312 kb on + strand at 6241.312 kb on + strand at 6241.312 kb on + strand at 6241.312 kb on + strand at 6241.312 kb on + strand at 6241.312 kb on + strand at 6241.312 kb on + strand at 6241.313 kb on - strand at 6241.313 kb on - strand at 6241.313 kb on - strand at 6241.330 kb on + strand at 6241.527 kb on - strand at 6241.646 kb on + strand, within QEN71_RS28065 at 6241.878 kb on - strand, within QEN71_RS28065 at 6242.045 kb on + strand, within QEN71_RS28065 at 6242.045 kb on + strand, within QEN71_RS28065 at 6242.163 kb on - strand, within QEN71_RS28065 at 6242.178 kb on + strand, within QEN71_RS28065 at 6242.217 kb on - strand, within QEN71_RS28065 at 6242.217 kb on - strand, within QEN71_RS28065 at 6242.774 kb on + strand, within QEN71_RS28065 at 6242.774 kb on + strand, within QEN71_RS28065 at 6242.982 kb on - strand, within QEN71_RS28065 at 6242.993 kb on + strand, within QEN71_RS28065 at 6243.132 kb on - strand, within QEN71_RS28065 at 6243.237 kb on - strand, within QEN71_RS28065 at 6243.489 kb on + strand at 6243.554 kb on + strand at 6243.701 kb on + strand at 6243.701 kb on + strand at 6243.701 kb on + strand at 6243.701 kb on + strand at 6243.701 kb on + strand at 6243.702 kb on - strand at 6243.702 kb on - strand at 6243.702 kb on - strand at 6243.702 kb on - strand at 6243.702 kb on - strand at 6243.702 kb on - strand at 6243.702 kb on - strand at 6243.758 kb on + strand at 6243.758 kb on + strand at 6243.848 kb on + strand, within QEN71_RS28070 at 6243.848 kb on + strand, within QEN71_RS28070 at 6243.866 kb on + strand, within QEN71_RS28070 at 6243.866 kb on + strand, within QEN71_RS28070 at 6243.867 kb on - strand, within QEN71_RS28070 at 6243.867 kb on - strand, within QEN71_RS28070 at 6243.867 kb on - strand, within QEN71_RS28070 at 6244.106 kb on + strand at 6244.106 kb on + strand at 6244.107 kb on - strand at 6244.107 kb on - strand at 6244.107 kb on - strand at 6244.107 kb on - strand at 6244.125 kb on + strand at 6244.125 kb on + strand at 6244.125 kb on + strand at 6244.125 kb on + strand at 6244.125 kb on + strand at 6244.125 kb on + strand at 6244.125 kb on + strand at 6244.139 kb on + strand at 6244.139 kb on + strand at 6244.143 kb on + strand at 6244.153 kb on + strand at 6244.367 kb on + strand, within QEN71_RS28075 at 6244.376 kb on + strand, within QEN71_RS28075 at 6244.455 kb on + strand at 6244.455 kb on + strand at 6244.455 kb on + strand at 6244.455 kb on + strand at 6244.455 kb on + strand at 6244.456 kb on - strand at 6244.456 kb on - strand at 6244.456 kb on - strand at 6244.456 kb on - strand at 6244.488 kb on + strand at 6244.489 kb on - strand at 6244.489 kb on - strand at 6244.501 kb on + strand at 6244.501 kb on + strand at 6244.501 kb on + strand at 6244.502 kb on - strand at 6244.502 kb on - strand at 6244.560 kb on + strand at 6244.560 kb on + strand at 6244.560 kb on + strand at 6244.560 kb on + strand at 6244.560 kb on + strand at 6244.560 kb on + strand at 6244.561 kb on - strand at 6244.561 kb on - strand at 6244.561 kb on - strand at 6244.561 kb on - strand at 6244.561 kb on - strand at 6244.561 kb on - strand at 6244.561 kb on - strand at 6244.561 kb on - strand at 6244.566 kb on + strand at 6244.567 kb on - strand at 6244.602 kb on + strand, within QEN71_RS28080 at 6244.602 kb on + strand, within QEN71_RS28080 at 6244.603 kb on - strand, within QEN71_RS28080
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM remove 6,240,355 + QEN71_RS28060 0.27 -0.7 6,240,355 + QEN71_RS28060 0.27 +0.9 6,240,355 + QEN71_RS28060 0.27 -0.0 6,240,356 - QEN71_RS28060 0.27 +0.6 6,240,356 - QEN71_RS28060 0.27 -0.1 6,240,404 + QEN71_RS28060 0.32 +0.2 6,240,415 + QEN71_RS28060 0.33 -0.6 6,240,448 + QEN71_RS28060 0.36 -0.2 6,240,449 - QEN71_RS28060 0.36 -1.2 6,240,449 - QEN71_RS28060 0.36 +1.1 6,240,637 + QEN71_RS28060 0.56 -0.0 6,240,638 - QEN71_RS28060 0.56 +1.5 6,240,638 - QEN71_RS28060 0.56 -1.2 6,240,638 - QEN71_RS28060 0.56 -0.8 6,240,697 - QEN71_RS28060 0.62 +0.8 6,240,752 - QEN71_RS28060 0.68 +0.1 6,240,752 - QEN71_RS28060 0.68 +0.6 6,240,752 - QEN71_RS28060 0.68 -0.5 6,240,752 - QEN71_RS28060 0.68 +0.2 6,240,921 - QEN71_RS28060 0.86 -1.1 6,241,039 - -0.5 6,241,075 + +1.4 6,241,075 + -1.9 6,241,076 - -0.6 6,241,076 - -0.1 6,241,076 - +1.5 6,241,076 - -0.0 6,241,076 - -0.0 6,241,076 - -1.5 6,241,076 - -0.0 6,241,105 + -0.4 6,241,105 + -1.1 6,241,106 - -0.6 6,241,106 - -1.6 6,241,106 - -0.0 6,241,173 + +0.2 6,241,174 - -0.1 6,241,174 - -0.1 6,241,214 + +1.2 6,241,214 + +1.0 6,241,214 + -1.6 6,241,214 + +0.1 6,241,214 + +0.9 6,241,214 + +0.4 6,241,214 + +0.1 6,241,214 + -0.6 6,241,214 + +0.2 6,241,214 + -1.2 6,241,214 + -0.5 6,241,214 + -1.4 6,241,214 + +0.3 6,241,214 + -0.3 6,241,215 - -2.8 6,241,215 - -1.2 6,241,215 - -0.9 6,241,215 - -1.7 6,241,215 - +0.7 6,241,215 - +1.0 6,241,215 - +0.9 6,241,215 - -0.8 6,241,215 - -0.3 6,241,215 - -2.6 6,241,215 - -0.1 6,241,215 - +0.1 6,241,251 - -0.1 6,241,251 - -0.4 6,241,251 - +1.2 6,241,282 + +0.1 6,241,282 + +0.4 6,241,282 + -1.1 6,241,282 + +0.2 6,241,283 - +0.9 6,241,283 - -0.2 6,241,284 + +0.4 6,241,312 + -0.5 6,241,312 + -0.3 6,241,312 + -0.4 6,241,312 + -0.7 6,241,312 + -0.6 6,241,312 + -0.2 6,241,312 + +0.2 6,241,313 - -0.4 6,241,313 - +0.6 6,241,313 - -1.1 6,241,330 + -2.6 6,241,527 - +0.5 6,241,646 + QEN71_RS28065 0.14 -0.8 6,241,878 - QEN71_RS28065 0.24 +0.5 6,242,045 + QEN71_RS28065 0.31 -0.6 6,242,045 + QEN71_RS28065 0.31 -0.1 6,242,163 - QEN71_RS28065 0.36 -0.1 6,242,178 + QEN71_RS28065 0.36 +0.2 6,242,217 - QEN71_RS28065 0.38 +0.2 6,242,217 - QEN71_RS28065 0.38 +0.6 6,242,774 + QEN71_RS28065 0.61 -1.5 6,242,774 + QEN71_RS28065 0.61 +1.2 6,242,982 - QEN71_RS28065 0.70 +0.2 6,242,993 + QEN71_RS28065 0.70 -1.2 6,243,132 - QEN71_RS28065 0.76 -0.1 6,243,237 - QEN71_RS28065 0.80 -0.6 6,243,489 + +0.2 6,243,554 + +0.4 6,243,701 + -0.5 6,243,701 + +0.2 6,243,701 + -1.2 6,243,701 + -0.4 6,243,701 + -0.5 6,243,702 - +0.5 6,243,702 - -0.6 6,243,702 - -0.2 6,243,702 - +0.6 6,243,702 - -0.1 6,243,702 - +1.9 6,243,702 - +0.9 6,243,758 + +0.3 6,243,758 + +1.2 6,243,848 + QEN71_RS28070 0.14 -0.5 6,243,848 + QEN71_RS28070 0.14 -1.5 6,243,866 + QEN71_RS28070 0.19 +2.8 6,243,866 + QEN71_RS28070 0.19 -0.4 6,243,867 - QEN71_RS28070 0.19 -1.1 6,243,867 - QEN71_RS28070 0.19 -0.8 6,243,867 - QEN71_RS28070 0.19 -0.9 6,244,106 + +0.1 6,244,106 + -0.7 6,244,107 - -1.6 6,244,107 - -0.9 6,244,107 - -1.1 6,244,107 - -0.9 6,244,125 + +1.1 6,244,125 + -0.5 6,244,125 + -3.2 6,244,125 + -1.0 6,244,125 + -2.7 6,244,125 + +0.1 6,244,125 + +0.2 6,244,139 + -0.1 6,244,139 + +0.3 6,244,143 + +0.2 6,244,153 + +0.4 6,244,367 + QEN71_RS28075 0.70 -0.9 6,244,376 + QEN71_RS28075 0.73 +0.1 6,244,455 + -0.5 6,244,455 + -0.8 6,244,455 + +0.1 6,244,455 + +0.2 6,244,455 + -1.9 6,244,456 - -0.8 6,244,456 - -0.8 6,244,456 - -0.1 6,244,456 - -0.8 6,244,488 + -0.4 6,244,489 - -0.5 6,244,489 - -0.6 6,244,501 + -0.1 6,244,501 + -0.5 6,244,501 + -0.1 6,244,502 - -1.4 6,244,502 - -1.0 6,244,560 + +0.2 6,244,560 + -0.6 6,244,560 + -1.8 6,244,560 + +1.9 6,244,560 + +1.2 6,244,560 + -0.5 6,244,561 - -1.0 6,244,561 - -0.8 6,244,561 - -2.5 6,244,561 - -0.9 6,244,561 - -0.7 6,244,561 - +0.0 6,244,561 - -1.6 6,244,561 - +0.3 6,244,566 + +0.6 6,244,567 - +0.2 6,244,602 + QEN71_RS28080 0.11 -0.3 6,244,602 + QEN71_RS28080 0.11 +0.3 6,244,603 - QEN71_RS28080 0.11 -0.1
Or see this region's nucleotide sequence