Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS27365

Experiment: LB_noSalt with Zinc 0.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntQEN71_RS27360 and QEN71_RS27365 are separated by 271 nucleotidesQEN71_RS27365 and QEN71_RS27370 are separated by 238 nucleotides QEN71_RS27360: QEN71_RS27360 - UDP-3-O-acyl-N-acetylglucosamine deacetylase, at 6,096,955 to 6,097,872 _RS27360 QEN71_RS27365: QEN71_RS27365 - peroxiredoxin, at 6,098,144 to 6,098,653 _RS27365 QEN71_RS27370: QEN71_RS27370 - cell division protein FtsZ, at 6,098,892 to 6,100,085 _RS27370 Position (kb) 6098 6099Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 6097.884 kb on - strandat 6097.884 kb on - strandat 6097.932 kb on - strandat 6097.932 kb on - strandat 6097.932 kb on - strandat 6097.934 kb on - strandat 6097.985 kb on + strandat 6097.985 kb on + strandat 6097.985 kb on + strandat 6097.985 kb on + strandat 6097.986 kb on - strandat 6097.986 kb on - strandat 6097.986 kb on - strandat 6097.990 kb on + strandat 6097.990 kb on + strandat 6097.990 kb on + strandat 6097.990 kb on + strandat 6097.991 kb on - strandat 6097.991 kb on - strandat 6098.170 kb on + strandat 6098.170 kb on + strandat 6098.170 kb on + strandat 6098.170 kb on + strandat 6098.170 kb on + strandat 6098.170 kb on + strandat 6098.170 kb on + strandat 6098.170 kb on + strandat 6098.171 kb on - strandat 6098.171 kb on - strandat 6098.171 kb on - strandat 6098.171 kb on - strandat 6098.171 kb on - strandat 6098.253 kb on + strand, within QEN71_RS27365at 6098.254 kb on - strand, within QEN71_RS27365at 6098.412 kb on - strand, within QEN71_RS27365at 6098.642 kb on + strandat 6098.642 kb on + strandat 6098.643 kb on - strandat 6098.643 kb on - strandat 6098.643 kb on - strandat 6098.692 kb on + strandat 6098.692 kb on + strandat 6098.692 kb on + strandat 6098.692 kb on + strandat 6098.692 kb on + strandat 6098.692 kb on + strandat 6098.692 kb on + strandat 6098.693 kb on - strandat 6098.693 kb on - strandat 6098.693 kb on - strandat 6098.693 kb on - strandat 6098.693 kb on - strandat 6098.693 kb on - strandat 6098.693 kb on - strandat 6098.693 kb on - strandat 6098.693 kb on - strandat 6098.749 kb on - strandat 6098.860 kb on + strandat 6098.861 kb on - strandat 6098.861 kb on - strandat 6098.991 kb on - strandat 6098.991 kb on - strandat 6098.991 kb on - strandat 6098.991 kb on - strandat 6098.991 kb on - strandat 6098.991 kb on - strandat 6098.991 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM
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6,097,884 - -0.2
6,097,884 - +0.4
6,097,932 - +2.5
6,097,932 - +0.1
6,097,932 - -1.7
6,097,934 - +0.3
6,097,985 + -0.9
6,097,985 + -0.1
6,097,985 + +0.2
6,097,985 + -1.0
6,097,986 - -0.4
6,097,986 - -0.2
6,097,986 - -0.4
6,097,990 + -0.3
6,097,990 + -1.1
6,097,990 + -0.8
6,097,990 + -0.4
6,097,991 - +0.9
6,097,991 - -0.3
6,098,170 + +0.2
6,098,170 + +0.9
6,098,170 + +0.2
6,098,170 + -0.7
6,098,170 + +0.4
6,098,170 + -0.1
6,098,170 + -0.9
6,098,170 + +1.6
6,098,171 - +0.2
6,098,171 - -1.1
6,098,171 - +0.2
6,098,171 - -0.2
6,098,171 - -0.3
6,098,253 + QEN71_RS27365 0.21 +0.4
6,098,254 - QEN71_RS27365 0.22 -1.4
6,098,412 - QEN71_RS27365 0.53 -2.4
6,098,642 + +0.2
6,098,642 + -0.5
6,098,643 - -1.2
6,098,643 - +0.9
6,098,643 - -0.3
6,098,692 + +0.5
6,098,692 + +0.1
6,098,692 + -0.1
6,098,692 + -0.8
6,098,692 + -0.2
6,098,692 + +0.3
6,098,692 + -2.3
6,098,693 - +0.5
6,098,693 - +1.7
6,098,693 - -0.9
6,098,693 - +0.1
6,098,693 - -0.1
6,098,693 - +1.0
6,098,693 - +1.8
6,098,693 - -0.4
6,098,693 - +0.2
6,098,749 - -1.3
6,098,860 + -0.0
6,098,861 - -3.0
6,098,861 - +0.2
6,098,991 - +0.2
6,098,991 - -1.3
6,098,991 - -1.6
6,098,991 - -1.0
6,098,991 - +0.9
6,098,991 - -1.2
6,098,991 - +0.7

Or see this region's nucleotide sequence