Experiment: LB_noSalt with Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS26265 and QEN71_RS26270 are separated by 19 nucleotides QEN71_RS26270 and QEN71_RS26275 are separated by 15 nucleotides QEN71_RS26275 and QEN71_RS26280 are separated by 210 nucleotides QEN71_RS26280 and QEN71_RS26285 are separated by 211 nucleotides QEN71_RS26285 and QEN71_RS26290 are separated by 86 nucleotides
QEN71_RS26265: QEN71_RS26265 - Tol-Pal system beta propeller repeat protein TolB, at 5,852,544 to 5,853,836
_RS26265
QEN71_RS26270: QEN71_RS26270 - peptidoglycan-associated lipoprotein Pal, at 5,853,856 to 5,854,365
_RS26270
QEN71_RS26275: QEN71_RS26275 - tol-pal system protein YbgF, at 5,854,381 to 5,855,130
_RS26275
QEN71_RS26280: QEN71_RS26280 - tRNA-Lys, at 5,855,341 to 5,855,416
_RS26280
QEN71_RS26285: QEN71_RS26285 - hypothetical protein, at 5,855,628 to 5,855,843
_RS26285
QEN71_RS26290: QEN71_RS26290 - glycosyltransferase, at 5,855,930 to 5,857,090
_RS26290
Position (kb)
5854
5855
5856 Strain fitness (log2 ratio)
-2
-1
0
1 at 5853.827 kb on + strand at 5853.827 kb on + strand at 5853.834 kb on + strand at 5853.834 kb on + strand at 5853.834 kb on + strand at 5853.834 kb on + strand at 5853.834 kb on + strand at 5853.834 kb on + strand at 5854.354 kb on + strand at 5854.354 kb on + strand at 5854.354 kb on + strand at 5854.354 kb on + strand at 5854.363 kb on + strand at 5854.363 kb on + strand at 5854.363 kb on + strand at 5854.363 kb on + strand at 5854.363 kb on + strand at 5854.366 kb on + strand at 5854.366 kb on + strand at 5854.366 kb on + strand at 5854.366 kb on + strand at 5854.366 kb on + strand at 5854.366 kb on + strand at 5854.366 kb on + strand at 5854.366 kb on + strand at 5854.366 kb on + strand at 5854.366 kb on + strand at 5854.366 kb on + strand at 5854.366 kb on + strand at 5854.366 kb on + strand at 5854.366 kb on + strand at 5854.366 kb on + strand at 5854.366 kb on + strand at 5854.366 kb on + strand at 5854.366 kb on + strand at 5854.380 kb on + strand at 5854.853 kb on - strand, within QEN71_RS26275 at 5854.875 kb on + strand, within QEN71_RS26275 at 5854.876 kb on - strand, within QEN71_RS26275 at 5854.885 kb on + strand, within QEN71_RS26275 at 5854.885 kb on + strand, within QEN71_RS26275 at 5854.906 kb on + strand, within QEN71_RS26275 at 5854.906 kb on + strand, within QEN71_RS26275 at 5854.906 kb on + strand, within QEN71_RS26275 at 5854.906 kb on + strand, within QEN71_RS26275 at 5854.907 kb on - strand, within QEN71_RS26275 at 5854.921 kb on + strand, within QEN71_RS26275 at 5854.921 kb on + strand, within QEN71_RS26275 at 5854.963 kb on + strand, within QEN71_RS26275 at 5854.963 kb on + strand, within QEN71_RS26275 at 5854.963 kb on + strand, within QEN71_RS26275 at 5854.963 kb on + strand, within QEN71_RS26275 at 5854.964 kb on - strand, within QEN71_RS26275 at 5854.964 kb on - strand, within QEN71_RS26275 at 5854.964 kb on - strand, within QEN71_RS26275 at 5855.074 kb on + strand at 5855.074 kb on + strand at 5855.074 kb on + strand at 5855.074 kb on + strand at 5855.075 kb on - strand at 5855.140 kb on + strand at 5855.140 kb on + strand at 5855.140 kb on + strand at 5855.141 kb on - strand at 5855.141 kb on - strand at 5855.141 kb on - strand at 5855.176 kb on + strand at 5855.176 kb on + strand at 5855.176 kb on + strand at 5855.176 kb on + strand at 5855.177 kb on - strand at 5855.199 kb on + strand at 5855.199 kb on + strand at 5855.199 kb on + strand at 5855.199 kb on + strand at 5855.454 kb on + strand at 5855.454 kb on + strand at 5855.484 kb on + strand at 5855.485 kb on - strand at 5855.559 kb on + strand at 5855.560 kb on - strand at 5855.564 kb on + strand at 5855.585 kb on - strand at 5855.585 kb on - strand at 5855.615 kb on + strand at 5855.629 kb on + strand at 5855.629 kb on + strand at 5855.699 kb on + strand, within QEN71_RS26285 at 5855.699 kb on + strand, within QEN71_RS26285 at 5855.700 kb on - strand, within QEN71_RS26285 at 5855.715 kb on + strand, within QEN71_RS26285 at 5855.715 kb on + strand, within QEN71_RS26285 at 5855.716 kb on - strand, within QEN71_RS26285 at 5855.813 kb on + strand, within QEN71_RS26285 at 5855.813 kb on + strand, within QEN71_RS26285 at 5855.850 kb on + strand at 5855.851 kb on - strand at 5855.854 kb on + strand at 5855.854 kb on + strand at 5855.855 kb on - strand at 5855.855 kb on - strand at 5855.868 kb on - strand at 5855.874 kb on + strand at 5855.908 kb on + strand at 5855.915 kb on + strand at 5855.915 kb on + strand at 5855.915 kb on + strand at 5855.959 kb on + strand at 5855.960 kb on - strand at 5855.960 kb on - strand at 5856.011 kb on + strand at 5856.011 kb on + strand at 5856.012 kb on - strand at 5856.012 kb on - strand at 5856.035 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM remove 5,853,827 + -0.3 5,853,827 + -0.6 5,853,834 + -1.1 5,853,834 + -1.0 5,853,834 + -0.9 5,853,834 + +0.2 5,853,834 + +1.6 5,853,834 + +1.2 5,854,354 + -0.3 5,854,354 + -0.7 5,854,354 + -1.0 5,854,354 + -2.5 5,854,363 + +0.4 5,854,363 + +0.8 5,854,363 + -0.4 5,854,363 + -0.1 5,854,363 + -1.5 5,854,366 + -1.0 5,854,366 + -0.7 5,854,366 + -0.8 5,854,366 + -0.0 5,854,366 + -0.4 5,854,366 + -1.0 5,854,366 + -0.6 5,854,366 + +0.6 5,854,366 + +1.2 5,854,366 + +0.2 5,854,366 + -0.8 5,854,366 + -0.7 5,854,366 + -0.1 5,854,366 + +0.2 5,854,366 + -1.0 5,854,366 + +0.4 5,854,366 + -1.6 5,854,366 + -2.1 5,854,380 + -0.2 5,854,853 - QEN71_RS26275 0.63 +0.6 5,854,875 + QEN71_RS26275 0.66 -0.6 5,854,876 - QEN71_RS26275 0.66 -0.4 5,854,885 + QEN71_RS26275 0.67 -1.7 5,854,885 + QEN71_RS26275 0.67 +0.2 5,854,906 + QEN71_RS26275 0.70 +0.2 5,854,906 + QEN71_RS26275 0.70 -0.7 5,854,906 + QEN71_RS26275 0.70 -0.6 5,854,906 + QEN71_RS26275 0.70 -0.4 5,854,907 - QEN71_RS26275 0.70 +0.6 5,854,921 + QEN71_RS26275 0.72 -1.4 5,854,921 + QEN71_RS26275 0.72 +0.6 5,854,963 + QEN71_RS26275 0.78 -1.4 5,854,963 + QEN71_RS26275 0.78 +0.2 5,854,963 + QEN71_RS26275 0.78 -1.9 5,854,963 + QEN71_RS26275 0.78 -0.4 5,854,964 - QEN71_RS26275 0.78 +0.2 5,854,964 - QEN71_RS26275 0.78 -0.8 5,854,964 - QEN71_RS26275 0.78 +0.4 5,855,074 + -0.7 5,855,074 + -1.4 5,855,074 + -0.8 5,855,074 + -0.1 5,855,075 - +0.8 5,855,140 + -0.4 5,855,140 + -2.1 5,855,140 + -0.6 5,855,141 - -1.6 5,855,141 - -0.3 5,855,141 - -0.8 5,855,176 + +1.1 5,855,176 + -2.0 5,855,176 + +0.0 5,855,176 + -0.3 5,855,177 - -0.8 5,855,199 + -0.1 5,855,199 + -0.1 5,855,199 + -0.4 5,855,199 + +0.2 5,855,454 + +0.3 5,855,454 + -0.9 5,855,484 + +0.2 5,855,485 - +0.7 5,855,559 + +1.2 5,855,560 - +1.7 5,855,564 + -1.1 5,855,585 - -0.6 5,855,585 - +0.8 5,855,615 + -1.7 5,855,629 + -1.3 5,855,629 + -0.2 5,855,699 + QEN71_RS26285 0.33 -0.2 5,855,699 + QEN71_RS26285 0.33 -0.5 5,855,700 - QEN71_RS26285 0.33 -0.5 5,855,715 + QEN71_RS26285 0.40 -0.3 5,855,715 + QEN71_RS26285 0.40 +0.1 5,855,716 - QEN71_RS26285 0.41 +0.1 5,855,813 + QEN71_RS26285 0.86 -0.5 5,855,813 + QEN71_RS26285 0.86 +0.1 5,855,850 + -1.6 5,855,851 - +0.2 5,855,854 + +0.4 5,855,854 + +0.2 5,855,855 - +0.1 5,855,855 - +1.2 5,855,868 - +0.2 5,855,874 + +0.2 5,855,908 + -0.1 5,855,915 + +0.5 5,855,915 + -0.5 5,855,915 + -0.2 5,855,959 + -1.0 5,855,960 - +0.8 5,855,960 - -0.3 5,856,011 + -1.1 5,856,011 + +0.9 5,856,012 - +0.2 5,856,012 - -1.4 5,856,035 + +0.2
Or see this region's nucleotide sequence