Experiment: LB_noSalt with Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS26015 and QEN71_RS26020 are separated by 101 nucleotides QEN71_RS26020 and QEN71_RS26025 are separated by 10 nucleotides
QEN71_RS26015: QEN71_RS26015 - efflux transporter outer membrane subunit, at 5,796,613 to 5,798,064
_RS26015
QEN71_RS26020: QEN71_RS26020 - efflux RND transporter periplasmic adaptor subunit, at 5,798,166 to 5,799,317
_RS26020
QEN71_RS26025: QEN71_RS26025 - efflux RND transporter permease subunit, at 5,799,328 to 5,802,387
_RS26025
Position (kb)
5798
5799
5800 Strain fitness (log2 ratio)
-1
0
1
2 at 5797.488 kb on - strand, within QEN71_RS26015 at 5797.488 kb on - strand, within QEN71_RS26015 at 5797.488 kb on - strand, within QEN71_RS26015 at 5797.488 kb on - strand, within QEN71_RS26015 at 5797.552 kb on + strand, within QEN71_RS26015 at 5797.552 kb on + strand, within QEN71_RS26015 at 5797.552 kb on + strand, within QEN71_RS26015 at 5797.552 kb on + strand, within QEN71_RS26015 at 5797.553 kb on - strand, within QEN71_RS26015 at 5797.618 kb on + strand, within QEN71_RS26015 at 5797.618 kb on + strand, within QEN71_RS26015 at 5797.618 kb on + strand, within QEN71_RS26015 at 5797.619 kb on - strand, within QEN71_RS26015 at 5797.619 kb on - strand, within QEN71_RS26015 at 5797.736 kb on - strand, within QEN71_RS26015 at 5797.748 kb on + strand, within QEN71_RS26015 at 5797.894 kb on + strand, within QEN71_RS26015 at 5797.894 kb on + strand, within QEN71_RS26015 at 5797.895 kb on - strand, within QEN71_RS26015 at 5797.895 kb on - strand, within QEN71_RS26015 at 5797.895 kb on - strand, within QEN71_RS26015 at 5797.895 kb on - strand, within QEN71_RS26015 at 5798.088 kb on + strand at 5798.089 kb on - strand at 5798.089 kb on - strand at 5798.334 kb on + strand, within QEN71_RS26020 at 5798.551 kb on - strand, within QEN71_RS26020 at 5798.785 kb on - strand, within QEN71_RS26020 at 5798.785 kb on - strand, within QEN71_RS26020 at 5798.785 kb on - strand, within QEN71_RS26020 at 5798.796 kb on + strand, within QEN71_RS26020 at 5798.853 kb on - strand, within QEN71_RS26020 at 5798.862 kb on + strand, within QEN71_RS26020 at 5798.863 kb on - strand, within QEN71_RS26020 at 5798.863 kb on - strand, within QEN71_RS26020 at 5798.863 kb on - strand, within QEN71_RS26020 at 5798.865 kb on - strand, within QEN71_RS26020 at 5798.865 kb on - strand, within QEN71_RS26020 at 5798.874 kb on - strand, within QEN71_RS26020 at 5798.986 kb on - strand, within QEN71_RS26020 at 5798.986 kb on - strand, within QEN71_RS26020 at 5798.986 kb on - strand, within QEN71_RS26020 at 5799.055 kb on - strand, within QEN71_RS26020 at 5799.315 kb on + strand at 5799.316 kb on - strand at 5799.342 kb on + strand at 5799.342 kb on + strand at 5799.362 kb on + strand at 5799.362 kb on + strand at 5799.362 kb on + strand at 5799.478 kb on + strand at 5799.482 kb on - strand at 5799.562 kb on + strand at 5799.562 kb on + strand at 5799.563 kb on - strand at 5799.623 kb on - strand at 5799.623 kb on - strand at 5799.623 kb on - strand at 5799.745 kb on + strand, within QEN71_RS26025 at 5799.745 kb on + strand, within QEN71_RS26025 at 5799.745 kb on + strand, within QEN71_RS26025 at 5799.745 kb on + strand, within QEN71_RS26025 at 5799.745 kb on + strand, within QEN71_RS26025 at 5799.745 kb on + strand, within QEN71_RS26025 at 5799.746 kb on - strand, within QEN71_RS26025 at 5799.746 kb on - strand, within QEN71_RS26025 at 5799.758 kb on - strand, within QEN71_RS26025 at 5799.758 kb on - strand, within QEN71_RS26025 at 5799.839 kb on + strand, within QEN71_RS26025 at 5799.961 kb on + strand, within QEN71_RS26025 at 5799.961 kb on + strand, within QEN71_RS26025 at 5799.962 kb on - strand, within QEN71_RS26025 at 5799.962 kb on - strand, within QEN71_RS26025 at 5799.962 kb on - strand, within QEN71_RS26025 at 5800.129 kb on + strand, within QEN71_RS26025 at 5800.130 kb on - strand, within QEN71_RS26025
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM remove 5,797,488 - QEN71_RS26015 0.60 -0.8 5,797,488 - QEN71_RS26015 0.60 +0.4 5,797,488 - QEN71_RS26015 0.60 -0.3 5,797,488 - QEN71_RS26015 0.60 -0.7 5,797,552 + QEN71_RS26015 0.65 -0.2 5,797,552 + QEN71_RS26015 0.65 -0.7 5,797,552 + QEN71_RS26015 0.65 -0.1 5,797,552 + QEN71_RS26015 0.65 +0.1 5,797,553 - QEN71_RS26015 0.65 +0.6 5,797,618 + QEN71_RS26015 0.69 -0.5 5,797,618 + QEN71_RS26015 0.69 +0.4 5,797,618 + QEN71_RS26015 0.69 +1.2 5,797,619 - QEN71_RS26015 0.69 +0.9 5,797,619 - QEN71_RS26015 0.69 -0.6 5,797,736 - QEN71_RS26015 0.77 +0.5 5,797,748 + QEN71_RS26015 0.78 +1.2 5,797,894 + QEN71_RS26015 0.88 -0.9 5,797,894 + QEN71_RS26015 0.88 -0.6 5,797,895 - QEN71_RS26015 0.88 -1.1 5,797,895 - QEN71_RS26015 0.88 +2.3 5,797,895 - QEN71_RS26015 0.88 -0.7 5,797,895 - QEN71_RS26015 0.88 -0.7 5,798,088 + +0.9 5,798,089 - -0.1 5,798,089 - -0.9 5,798,334 + QEN71_RS26020 0.15 -0.3 5,798,551 - QEN71_RS26020 0.33 -0.3 5,798,785 - QEN71_RS26020 0.54 -0.4 5,798,785 - QEN71_RS26020 0.54 +0.3 5,798,785 - QEN71_RS26020 0.54 -0.4 5,798,796 + QEN71_RS26020 0.55 +0.1 5,798,853 - QEN71_RS26020 0.60 -0.2 5,798,862 + QEN71_RS26020 0.60 -0.8 5,798,863 - QEN71_RS26020 0.61 +0.5 5,798,863 - QEN71_RS26020 0.61 -0.6 5,798,863 - QEN71_RS26020 0.61 +1.1 5,798,865 - QEN71_RS26020 0.61 -0.0 5,798,865 - QEN71_RS26020 0.61 -0.6 5,798,874 - QEN71_RS26020 0.61 -0.2 5,798,986 - QEN71_RS26020 0.71 +0.6 5,798,986 - QEN71_RS26020 0.71 -0.6 5,798,986 - QEN71_RS26020 0.71 +1.1 5,799,055 - QEN71_RS26020 0.77 -0.5 5,799,315 + +0.4 5,799,316 - -0.5 5,799,342 + +0.2 5,799,342 + -0.6 5,799,362 + -0.9 5,799,362 + +0.4 5,799,362 + -0.6 5,799,478 + -0.2 5,799,482 - +0.3 5,799,562 + +0.6 5,799,562 + +0.6 5,799,563 - -0.4 5,799,623 - -0.6 5,799,623 - +1.2 5,799,623 - -0.7 5,799,745 + QEN71_RS26025 0.14 -0.0 5,799,745 + QEN71_RS26025 0.14 +2.2 5,799,745 + QEN71_RS26025 0.14 +0.3 5,799,745 + QEN71_RS26025 0.14 +0.1 5,799,745 + QEN71_RS26025 0.14 -0.4 5,799,745 + QEN71_RS26025 0.14 +0.8 5,799,746 - QEN71_RS26025 0.14 -1.3 5,799,746 - QEN71_RS26025 0.14 -0.3 5,799,758 - QEN71_RS26025 0.14 +0.8 5,799,758 - QEN71_RS26025 0.14 +1.4 5,799,839 + QEN71_RS26025 0.17 -1.4 5,799,961 + QEN71_RS26025 0.21 -0.2 5,799,961 + QEN71_RS26025 0.21 -0.5 5,799,962 - QEN71_RS26025 0.21 +0.6 5,799,962 - QEN71_RS26025 0.21 -1.0 5,799,962 - QEN71_RS26025 0.21 +0.1 5,800,129 + QEN71_RS26025 0.26 -1.0 5,800,130 - QEN71_RS26025 0.26 -1.0
Or see this region's nucleotide sequence