Experiment: LB_noSalt with Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS25730 and QEN71_RS25735 are separated by 158 nucleotides QEN71_RS25735 and QEN71_RS25740 overlap by 19 nucleotides QEN71_RS25740 and QEN71_RS25745 are separated by 7 nucleotides
QEN71_RS25730: QEN71_RS25730 - ABC transporter permease, at 5,733,170 to 5,734,024
_RS25730
QEN71_RS25735: QEN71_RS25735 - glycosyltransferase family 2 protein, at 5,734,183 to 5,735,094
_RS25735
QEN71_RS25740: QEN71_RS25740 - dTDP-4-dehydrorhamnose reductase, at 5,735,076 to 5,735,969
_RS25740
QEN71_RS25745: QEN71_RS25745 - dTDP-4-dehydrorhamnose 3,5-epimerase, at 5,735,977 to 5,736,528
_RS25745
Position (kb) 5734
5735
5736 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5733.252 kb on + strand at 5733.252 kb on + strand at 5733.252 kb on + strand at 5733.253 kb on - strand at 5733.255 kb on - strand at 5733.381 kb on + strand, within QEN71_RS25730 at 5733.547 kb on + strand, within QEN71_RS25730 at 5733.548 kb on - strand, within QEN71_RS25730 at 5733.548 kb on - strand, within QEN71_RS25730 at 5733.548 kb on - strand, within QEN71_RS25730 at 5733.589 kb on + strand, within QEN71_RS25730 at 5733.589 kb on + strand, within QEN71_RS25730 at 5733.590 kb on - strand, within QEN71_RS25730 at 5733.590 kb on - strand, within QEN71_RS25730 at 5733.707 kb on + strand, within QEN71_RS25730 at 5733.708 kb on - strand, within QEN71_RS25730 at 5733.708 kb on - strand, within QEN71_RS25730 at 5733.708 kb on - strand, within QEN71_RS25730 at 5733.831 kb on + strand, within QEN71_RS25730 at 5733.832 kb on - strand, within QEN71_RS25730 at 5733.832 kb on - strand, within QEN71_RS25730 at 5733.892 kb on + strand, within QEN71_RS25730 at 5733.892 kb on + strand, within QEN71_RS25730 at 5733.892 kb on + strand, within QEN71_RS25730 at 5733.892 kb on + strand, within QEN71_RS25730 at 5733.893 kb on - strand, within QEN71_RS25730 at 5733.893 kb on - strand, within QEN71_RS25730 at 5733.893 kb on - strand, within QEN71_RS25730 at 5733.893 kb on - strand, within QEN71_RS25730 at 5734.016 kb on + strand at 5734.016 kb on + strand at 5734.017 kb on - strand at 5734.028 kb on + strand at 5734.028 kb on + strand at 5734.028 kb on + strand at 5734.028 kb on + strand at 5734.029 kb on - strand at 5734.029 kb on - strand at 5734.029 kb on - strand at 5734.029 kb on - strand at 5734.029 kb on - strand at 5734.029 kb on - strand at 5734.041 kb on + strand at 5734.041 kb on + strand at 5734.042 kb on - strand at 5734.099 kb on + strand at 5734.099 kb on + strand at 5734.100 kb on - strand at 5734.100 kb on - strand at 5734.100 kb on - strand at 5734.100 kb on - strand at 5734.100 kb on - strand at 5734.115 kb on + strand at 5734.115 kb on + strand at 5734.115 kb on + strand at 5734.116 kb on - strand at 5734.116 kb on - strand at 5734.116 kb on - strand at 5734.116 kb on - strand at 5734.116 kb on - strand at 5734.116 kb on - strand at 5734.116 kb on - strand at 5734.116 kb on - strand at 5734.121 kb on + strand at 5734.121 kb on + strand at 5734.122 kb on - strand at 5734.122 kb on - strand at 5734.275 kb on - strand, within QEN71_RS25735 at 5734.275 kb on - strand, within QEN71_RS25735 at 5734.275 kb on - strand, within QEN71_RS25735 at 5734.334 kb on + strand, within QEN71_RS25735 at 5734.334 kb on + strand, within QEN71_RS25735 at 5734.334 kb on + strand, within QEN71_RS25735 at 5734.334 kb on + strand, within QEN71_RS25735 at 5734.334 kb on + strand, within QEN71_RS25735 at 5734.335 kb on - strand, within QEN71_RS25735 at 5734.335 kb on - strand, within QEN71_RS25735 at 5734.335 kb on - strand, within QEN71_RS25735 at 5734.335 kb on - strand, within QEN71_RS25735 at 5734.335 kb on - strand, within QEN71_RS25735 at 5734.335 kb on - strand, within QEN71_RS25735 at 5734.335 kb on - strand, within QEN71_RS25735 at 5734.335 kb on - strand, within QEN71_RS25735 at 5734.373 kb on + strand, within QEN71_RS25735 at 5734.373 kb on + strand, within QEN71_RS25735 at 5734.373 kb on + strand, within QEN71_RS25735 at 5734.373 kb on + strand, within QEN71_RS25735 at 5734.373 kb on + strand, within QEN71_RS25735 at 5734.373 kb on + strand, within QEN71_RS25735 at 5734.373 kb on + strand, within QEN71_RS25735 at 5734.374 kb on - strand, within QEN71_RS25735 at 5734.374 kb on - strand, within QEN71_RS25735 at 5734.376 kb on + strand, within QEN71_RS25735 at 5734.376 kb on + strand, within QEN71_RS25735 at 5734.376 kb on + strand, within QEN71_RS25735 at 5734.376 kb on + strand, within QEN71_RS25735 at 5734.376 kb on + strand, within QEN71_RS25735 at 5734.376 kb on + strand, within QEN71_RS25735 at 5734.377 kb on - strand, within QEN71_RS25735 at 5734.377 kb on - strand, within QEN71_RS25735 at 5734.377 kb on - strand, within QEN71_RS25735 at 5734.377 kb on - strand, within QEN71_RS25735 at 5734.476 kb on + strand, within QEN71_RS25735 at 5734.476 kb on + strand, within QEN71_RS25735 at 5734.476 kb on + strand, within QEN71_RS25735 at 5734.476 kb on + strand, within QEN71_RS25735 at 5734.476 kb on + strand, within QEN71_RS25735 at 5734.476 kb on + strand, within QEN71_RS25735 at 5734.477 kb on - strand, within QEN71_RS25735 at 5734.477 kb on - strand, within QEN71_RS25735 at 5734.477 kb on - strand, within QEN71_RS25735 at 5734.477 kb on - strand, within QEN71_RS25735 at 5734.477 kb on - strand, within QEN71_RS25735 at 5734.477 kb on - strand, within QEN71_RS25735 at 5734.477 kb on - strand, within QEN71_RS25735 at 5734.477 kb on - strand, within QEN71_RS25735 at 5734.477 kb on - strand, within QEN71_RS25735 at 5734.477 kb on - strand, within QEN71_RS25735 at 5734.477 kb on - strand, within QEN71_RS25735 at 5734.531 kb on - strand, within QEN71_RS25735 at 5734.531 kb on - strand, within QEN71_RS25735 at 5734.568 kb on + strand, within QEN71_RS25735 at 5734.596 kb on + strand, within QEN71_RS25735 at 5734.596 kb on + strand, within QEN71_RS25735 at 5734.596 kb on + strand, within QEN71_RS25735 at 5734.596 kb on + strand, within QEN71_RS25735 at 5734.596 kb on + strand, within QEN71_RS25735 at 5734.596 kb on + strand, within QEN71_RS25735 at 5734.596 kb on + strand, within QEN71_RS25735 at 5734.596 kb on + strand, within QEN71_RS25735 at 5734.596 kb on + strand, within QEN71_RS25735 at 5734.597 kb on - strand, within QEN71_RS25735 at 5734.597 kb on - strand, within QEN71_RS25735 at 5734.597 kb on - strand, within QEN71_RS25735 at 5734.597 kb on - strand, within QEN71_RS25735 at 5734.597 kb on - strand, within QEN71_RS25735 at 5734.597 kb on - strand, within QEN71_RS25735 at 5734.597 kb on - strand, within QEN71_RS25735 at 5734.597 kb on - strand, within QEN71_RS25735 at 5734.597 kb on - strand, within QEN71_RS25735 at 5734.706 kb on + strand, within QEN71_RS25735 at 5734.706 kb on + strand, within QEN71_RS25735 at 5734.706 kb on + strand, within QEN71_RS25735 at 5734.707 kb on - strand, within QEN71_RS25735 at 5734.707 kb on - strand, within QEN71_RS25735 at 5734.707 kb on - strand, within QEN71_RS25735 at 5734.707 kb on - strand, within QEN71_RS25735 at 5734.777 kb on + strand, within QEN71_RS25735 at 5734.778 kb on - strand, within QEN71_RS25735 at 5734.778 kb on - strand, within QEN71_RS25735 at 5734.778 kb on - strand, within QEN71_RS25735 at 5734.878 kb on + strand, within QEN71_RS25735 at 5734.878 kb on + strand, within QEN71_RS25735 at 5734.879 kb on - strand, within QEN71_RS25735 at 5734.905 kb on - strand, within QEN71_RS25735 at 5735.094 kb on + strand at 5735.095 kb on - strand at 5735.095 kb on - strand at 5735.095 kb on - strand at 5735.095 kb on - strand at 5735.095 kb on - strand at 5735.095 kb on - strand at 5735.095 kb on - strand at 5735.095 kb on - strand at 5735.095 kb on - strand at 5735.095 kb on - strand at 5735.095 kb on - strand at 5735.095 kb on - strand at 5735.095 kb on - strand at 5735.095 kb on - strand at 5735.095 kb on - strand at 5735.095 kb on - strand at 5735.095 kb on - strand at 5735.095 kb on - strand at 5735.095 kb on - strand at 5735.095 kb on - strand at 5735.095 kb on - strand at 5735.095 kb on - strand at 5735.095 kb on - strand at 5735.969 kb on + strand at 5735.969 kb on + strand at 5735.969 kb on + strand at 5735.969 kb on + strand at 5735.969 kb on + strand at 5735.969 kb on + strand at 5735.969 kb on + strand at 5735.969 kb on + strand at 5735.969 kb on + strand at 5735.969 kb on + strand at 5735.969 kb on + strand at 5735.969 kb on + strand at 5735.969 kb on + strand at 5735.969 kb on + strand at 5735.969 kb on + strand at 5735.969 kb on + strand at 5735.969 kb on + strand at 5735.969 kb on + strand at 5735.970 kb on - strand at 5735.970 kb on - strand at 5735.970 kb on - strand at 5735.970 kb on - strand at 5735.970 kb on - strand at 5735.970 kb on - strand at 5735.970 kb on - strand at 5735.970 kb on - strand at 5735.970 kb on - strand at 5735.970 kb on - strand at 5735.970 kb on - strand at 5735.970 kb on - strand at 5735.970 kb on - strand at 5735.970 kb on - strand at 5735.970 kb on - strand at 5735.970 kb on - strand at 5735.970 kb on - strand at 5735.970 kb on - strand at 5735.970 kb on - strand at 5735.970 kb on - strand at 5735.970 kb on - strand at 5735.970 kb on - strand at 5735.970 kb on - strand at 5735.970 kb on - strand at 5735.970 kb on - strand at 5735.970 kb on - strand at 5735.970 kb on - strand at 5735.970 kb on - strand at 5735.970 kb on - strand at 5735.971 kb on + strand at 5735.971 kb on + strand at 5735.971 kb on + strand at 5735.972 kb on - strand at 5735.972 kb on - strand at 5735.972 kb on - strand at 5735.972 kb on - strand at 5735.972 kb on - strand at 5735.972 kb on - strand at 5735.972 kb on - strand at 5735.972 kb on - strand at 5735.972 kb on - strand at 5735.972 kb on - strand at 5735.972 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM remove 5,733,252 + -0.1 5,733,252 + -0.6 5,733,252 + -1.0 5,733,253 - -1.1 5,733,255 - -0.6 5,733,381 + QEN71_RS25730 0.25 -0.4 5,733,547 + QEN71_RS25730 0.44 -1.6 5,733,548 - QEN71_RS25730 0.44 -0.5 5,733,548 - QEN71_RS25730 0.44 +0.2 5,733,548 - QEN71_RS25730 0.44 -2.5 5,733,589 + QEN71_RS25730 0.49 -0.6 5,733,589 + QEN71_RS25730 0.49 -0.4 5,733,590 - QEN71_RS25730 0.49 -1.2 5,733,590 - QEN71_RS25730 0.49 -0.7 5,733,707 + QEN71_RS25730 0.63 -0.4 5,733,708 - QEN71_RS25730 0.63 -0.8 5,733,708 - QEN71_RS25730 0.63 -1.5 5,733,708 - QEN71_RS25730 0.63 -1.0 5,733,831 + QEN71_RS25730 0.77 -0.4 5,733,832 - QEN71_RS25730 0.77 -0.4 5,733,832 - QEN71_RS25730 0.77 -2.7 5,733,892 + QEN71_RS25730 0.84 -1.7 5,733,892 + QEN71_RS25730 0.84 -2.6 5,733,892 + QEN71_RS25730 0.84 -1.6 5,733,892 + QEN71_RS25730 0.84 +1.9 5,733,893 - QEN71_RS25730 0.85 +0.0 5,733,893 - QEN71_RS25730 0.85 -2.6 5,733,893 - QEN71_RS25730 0.85 -1.0 5,733,893 - QEN71_RS25730 0.85 -1.5 5,734,016 + -1.5 5,734,016 + -2.4 5,734,017 - +0.0 5,734,028 + -0.1 5,734,028 + +0.2 5,734,028 + -1.6 5,734,028 + -0.4 5,734,029 - +0.2 5,734,029 - -0.4 5,734,029 - -1.2 5,734,029 - +0.2 5,734,029 - -1.9 5,734,029 - -1.5 5,734,041 + -0.1 5,734,041 + -2.8 5,734,042 - -0.0 5,734,099 + +0.2 5,734,099 + +0.2 5,734,100 - -0.2 5,734,100 - -0.6 5,734,100 - -2.2 5,734,100 - -0.1 5,734,100 - -0.5 5,734,115 + -0.7 5,734,115 + -1.1 5,734,115 + -1.1 5,734,116 - -0.3 5,734,116 - -0.5 5,734,116 - -0.3 5,734,116 - +0.3 5,734,116 - -0.1 5,734,116 - -0.7 5,734,116 - -0.8 5,734,116 - -2.4 5,734,121 + -0.4 5,734,121 + -1.3 5,734,122 - +0.3 5,734,122 - +0.2 5,734,275 - QEN71_RS25735 0.10 -2.4 5,734,275 - QEN71_RS25735 0.10 -2.6 5,734,275 - QEN71_RS25735 0.10 +0.2 5,734,334 + QEN71_RS25735 0.17 -2.5 5,734,334 + QEN71_RS25735 0.17 -2.2 5,734,334 + QEN71_RS25735 0.17 -1.6 5,734,334 + QEN71_RS25735 0.17 -0.3 5,734,334 + QEN71_RS25735 0.17 -2.9 5,734,335 - QEN71_RS25735 0.17 -0.4 5,734,335 - QEN71_RS25735 0.17 -0.8 5,734,335 - QEN71_RS25735 0.17 -2.2 5,734,335 - QEN71_RS25735 0.17 -1.8 5,734,335 - QEN71_RS25735 0.17 -2.2 5,734,335 - QEN71_RS25735 0.17 +0.1 5,734,335 - QEN71_RS25735 0.17 -0.4 5,734,335 - QEN71_RS25735 0.17 -1.9 5,734,373 + QEN71_RS25735 0.21 +0.2 5,734,373 + QEN71_RS25735 0.21 -2.6 5,734,373 + QEN71_RS25735 0.21 -0.7 5,734,373 + QEN71_RS25735 0.21 -0.8 5,734,373 + QEN71_RS25735 0.21 -1.4 5,734,373 + QEN71_RS25735 0.21 -2.1 5,734,373 + QEN71_RS25735 0.21 -1.7 5,734,374 - QEN71_RS25735 0.21 -1.2 5,734,374 - QEN71_RS25735 0.21 -0.2 5,734,376 + QEN71_RS25735 0.21 -1.0 5,734,376 + QEN71_RS25735 0.21 -0.4 5,734,376 + QEN71_RS25735 0.21 -0.0 5,734,376 + QEN71_RS25735 0.21 -1.5 5,734,376 + QEN71_RS25735 0.21 -1.5 5,734,376 + QEN71_RS25735 0.21 -2.5 5,734,377 - QEN71_RS25735 0.21 -1.0 5,734,377 - QEN71_RS25735 0.21 -0.4 5,734,377 - QEN71_RS25735 0.21 -0.4 5,734,377 - QEN71_RS25735 0.21 -1.3 5,734,476 + QEN71_RS25735 0.32 -2.4 5,734,476 + QEN71_RS25735 0.32 +0.2 5,734,476 + QEN71_RS25735 0.32 -1.2 5,734,476 + QEN71_RS25735 0.32 -0.7 5,734,476 + QEN71_RS25735 0.32 +0.2 5,734,476 + QEN71_RS25735 0.32 +2.2 5,734,477 - QEN71_RS25735 0.32 +0.1 5,734,477 - QEN71_RS25735 0.32 -0.5 5,734,477 - QEN71_RS25735 0.32 -0.6 5,734,477 - QEN71_RS25735 0.32 -3.0 5,734,477 - QEN71_RS25735 0.32 -1.2 5,734,477 - QEN71_RS25735 0.32 -0.4 5,734,477 - QEN71_RS25735 0.32 -1.4 5,734,477 - QEN71_RS25735 0.32 -1.0 5,734,477 - QEN71_RS25735 0.32 +1.5 5,734,477 - QEN71_RS25735 0.32 -1.7 5,734,477 - QEN71_RS25735 0.32 -2.4 5,734,531 - QEN71_RS25735 0.38 -0.7 5,734,531 - QEN71_RS25735 0.38 -0.7 5,734,568 + QEN71_RS25735 0.42 -1.3 5,734,596 + QEN71_RS25735 0.45 -0.9 5,734,596 + QEN71_RS25735 0.45 +1.0 5,734,596 + QEN71_RS25735 0.45 -1.8 5,734,596 + QEN71_RS25735 0.45 -1.3 5,734,596 + QEN71_RS25735 0.45 -1.4 5,734,596 + QEN71_RS25735 0.45 -1.1 5,734,596 + QEN71_RS25735 0.45 -1.1 5,734,596 + QEN71_RS25735 0.45 -0.2 5,734,596 + QEN71_RS25735 0.45 -0.4 5,734,597 - QEN71_RS25735 0.45 -1.4 5,734,597 - QEN71_RS25735 0.45 -0.1 5,734,597 - QEN71_RS25735 0.45 -1.4 5,734,597 - QEN71_RS25735 0.45 -0.7 5,734,597 - QEN71_RS25735 0.45 -1.3 5,734,597 - QEN71_RS25735 0.45 -2.3 5,734,597 - QEN71_RS25735 0.45 -1.0 5,734,597 - QEN71_RS25735 0.45 -1.4 5,734,597 - QEN71_RS25735 0.45 -2.2 5,734,706 + QEN71_RS25735 0.57 -0.4 5,734,706 + QEN71_RS25735 0.57 -1.7 5,734,706 + QEN71_RS25735 0.57 -1.6 5,734,707 - QEN71_RS25735 0.57 -2.0 5,734,707 - QEN71_RS25735 0.57 -1.4 5,734,707 - QEN71_RS25735 0.57 +1.0 5,734,707 - QEN71_RS25735 0.57 -1.4 5,734,777 + QEN71_RS25735 0.65 -1.9 5,734,778 - QEN71_RS25735 0.65 -0.3 5,734,778 - QEN71_RS25735 0.65 -0.5 5,734,778 - QEN71_RS25735 0.65 -2.4 5,734,878 + QEN71_RS25735 0.76 -0.9 5,734,878 + QEN71_RS25735 0.76 -1.2 5,734,879 - QEN71_RS25735 0.76 -0.7 5,734,905 - QEN71_RS25735 0.79 -0.9 5,735,094 + -1.2 5,735,095 - -1.8 5,735,095 - -1.8 5,735,095 - -2.0 5,735,095 - -1.0 5,735,095 - -2.8 5,735,095 - +0.5 5,735,095 - +0.2 5,735,095 - -0.8 5,735,095 - -1.6 5,735,095 - -0.2 5,735,095 - +0.6 5,735,095 - -1.3 5,735,095 - -1.6 5,735,095 - +0.2 5,735,095 - -1.7 5,735,095 - -2.0 5,735,095 - -0.8 5,735,095 - -1.1 5,735,095 - -1.1 5,735,095 - -2.6 5,735,095 - -1.1 5,735,095 - +1.9 5,735,095 - -0.3 5,735,969 + -2.1 5,735,969 + -2.3 5,735,969 + -1.2 5,735,969 + -1.8 5,735,969 + -1.0 5,735,969 + -1.0 5,735,969 + -3.0 5,735,969 + -2.1 5,735,969 + +0.3 5,735,969 + -2.9 5,735,969 + -2.2 5,735,969 + -1.5 5,735,969 + -0.4 5,735,969 + -3.2 5,735,969 + -1.1 5,735,969 + -1.6 5,735,969 + -0.3 5,735,969 + -0.7 5,735,970 - -1.3 5,735,970 - -2.0 5,735,970 - +0.1 5,735,970 - +0.9 5,735,970 - -0.6 5,735,970 - -1.6 5,735,970 - -1.5 5,735,970 - +0.5 5,735,970 - -0.6 5,735,970 - +1.7 5,735,970 - -0.4 5,735,970 - -0.4 5,735,970 - +0.9 5,735,970 - +1.9 5,735,970 - -0.5 5,735,970 - -0.0 5,735,970 - -0.4 5,735,970 - +0.5 5,735,970 - -0.1 5,735,970 - -0.5 5,735,970 - -0.4 5,735,970 - -0.8 5,735,970 - -0.0 5,735,970 - -0.2 5,735,970 - -0.9 5,735,970 - -0.5 5,735,970 - -0.6 5,735,970 - +2.0 5,735,970 - +0.4 5,735,971 + +0.2 5,735,971 + -1.0 5,735,971 + +2.2 5,735,972 - +0.2 5,735,972 - +0.2 5,735,972 - -0.9 5,735,972 - -0.5 5,735,972 - -1.1 5,735,972 - +0.8 5,735,972 - +0.6 5,735,972 - +0.8 5,735,972 - -0.6 5,735,972 - +0.4 5,735,972 - -0.8
Or see this region's nucleotide sequence