Experiment: LB_noSalt with Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS25695 and QEN71_RS25700 overlap by 1 nucleotides QEN71_RS25700 and QEN71_RS25705 are separated by 84 nucleotides QEN71_RS25705 and QEN71_RS25710 overlap by 14 nucleotides
QEN71_RS25695: QEN71_RS25695 - glycosyltransferase family 4 protein, at 5,726,192 to 5,727,805
_RS25695
QEN71_RS25700: QEN71_RS25700 - DegT/DnrJ/EryC1/StrS family aminotransferase, at 5,727,805 to 5,728,902
_RS25700
QEN71_RS25705: QEN71_RS25705 - FdtA/QdtA family cupin domain-containing protein, at 5,728,987 to 5,729,397
_RS25705
QEN71_RS25710: QEN71_RS25710 - GNAT family N-acetyltransferase, at 5,729,384 to 5,730,358
_RS25710
Position (kb) 5727
5728
5729 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5726.817 kb on + strand, within QEN71_RS25695 at 5726.817 kb on + strand, within QEN71_RS25695 at 5726.818 kb on - strand, within QEN71_RS25695 at 5726.818 kb on - strand, within QEN71_RS25695 at 5726.818 kb on - strand, within QEN71_RS25695 at 5726.818 kb on - strand, within QEN71_RS25695 at 5726.919 kb on + strand, within QEN71_RS25695 at 5727.009 kb on + strand, within QEN71_RS25695 at 5727.010 kb on - strand, within QEN71_RS25695 at 5727.010 kb on - strand, within QEN71_RS25695 at 5727.022 kb on - strand, within QEN71_RS25695 at 5727.022 kb on - strand, within QEN71_RS25695 at 5727.080 kb on - strand, within QEN71_RS25695 at 5727.175 kb on - strand, within QEN71_RS25695 at 5727.255 kb on + strand, within QEN71_RS25695 at 5727.255 kb on + strand, within QEN71_RS25695 at 5727.255 kb on + strand, within QEN71_RS25695 at 5727.255 kb on + strand, within QEN71_RS25695 at 5727.255 kb on + strand, within QEN71_RS25695 at 5727.255 kb on + strand, within QEN71_RS25695 at 5727.256 kb on - strand, within QEN71_RS25695 at 5727.256 kb on - strand, within QEN71_RS25695 at 5727.256 kb on - strand, within QEN71_RS25695 at 5727.299 kb on + strand, within QEN71_RS25695 at 5727.300 kb on - strand, within QEN71_RS25695 at 5727.374 kb on + strand, within QEN71_RS25695 at 5727.375 kb on - strand, within QEN71_RS25695 at 5727.522 kb on + strand, within QEN71_RS25695 at 5727.523 kb on - strand, within QEN71_RS25695 at 5727.523 kb on - strand, within QEN71_RS25695 at 5727.599 kb on + strand, within QEN71_RS25695 at 5727.600 kb on - strand, within QEN71_RS25695 at 5727.618 kb on + strand, within QEN71_RS25695 at 5727.619 kb on - strand, within QEN71_RS25695 at 5727.680 kb on - strand at 5727.680 kb on - strand at 5727.757 kb on + strand at 5727.758 kb on - strand at 5727.758 kb on - strand at 5727.758 kb on - strand at 5727.806 kb on + strand at 5727.836 kb on + strand at 5727.836 kb on + strand at 5727.836 kb on + strand at 5727.836 kb on + strand at 5727.837 kb on - strand at 5727.837 kb on - strand at 5727.837 kb on - strand at 5727.858 kb on + strand at 5727.858 kb on + strand at 5727.859 kb on - strand at 5727.859 kb on - strand at 5728.124 kb on + strand, within QEN71_RS25700 at 5728.125 kb on - strand, within QEN71_RS25700 at 5728.127 kb on + strand, within QEN71_RS25700 at 5728.128 kb on - strand, within QEN71_RS25700 at 5728.244 kb on + strand, within QEN71_RS25700 at 5728.245 kb on - strand, within QEN71_RS25700 at 5728.245 kb on - strand, within QEN71_RS25700 at 5728.503 kb on - strand, within QEN71_RS25700 at 5728.570 kb on - strand, within QEN71_RS25700 at 5728.645 kb on - strand, within QEN71_RS25700 at 5728.646 kb on + strand, within QEN71_RS25700 at 5728.646 kb on + strand, within QEN71_RS25700 at 5728.646 kb on + strand, within QEN71_RS25700 at 5728.646 kb on + strand, within QEN71_RS25700 at 5728.647 kb on - strand, within QEN71_RS25700 at 5728.647 kb on - strand, within QEN71_RS25700 at 5728.647 kb on - strand, within QEN71_RS25700 at 5728.647 kb on - strand, within QEN71_RS25700 at 5728.647 kb on - strand, within QEN71_RS25700 at 5728.647 kb on - strand, within QEN71_RS25700 at 5728.733 kb on - strand, within QEN71_RS25700 at 5728.760 kb on + strand, within QEN71_RS25700 at 5728.806 kb on + strand at 5728.807 kb on - strand at 5728.808 kb on + strand at 5728.808 kb on + strand at 5728.809 kb on - strand at 5728.809 kb on - strand at 5728.822 kb on + strand at 5728.823 kb on - strand at 5728.866 kb on + strand at 5728.866 kb on + strand at 5728.869 kb on - strand at 5728.869 kb on - strand at 5728.915 kb on + strand at 5728.915 kb on + strand at 5728.925 kb on + strand at 5728.925 kb on + strand at 5729.012 kb on + strand at 5729.012 kb on + strand at 5729.013 kb on - strand at 5729.031 kb on - strand, within QEN71_RS25705 at 5729.033 kb on + strand, within QEN71_RS25705 at 5729.034 kb on - strand, within QEN71_RS25705 at 5729.034 kb on - strand, within QEN71_RS25705 at 5729.124 kb on + strand, within QEN71_RS25705 at 5729.125 kb on - strand, within QEN71_RS25705 at 5729.272 kb on - strand, within QEN71_RS25705 at 5729.277 kb on - strand, within QEN71_RS25705 at 5729.277 kb on - strand, within QEN71_RS25705 at 5729.277 kb on - strand, within QEN71_RS25705 at 5729.277 kb on - strand, within QEN71_RS25705 at 5729.282 kb on + strand, within QEN71_RS25705 at 5729.282 kb on + strand, within QEN71_RS25705 at 5729.282 kb on + strand, within QEN71_RS25705 at 5729.283 kb on - strand, within QEN71_RS25705 at 5729.298 kb on + strand, within QEN71_RS25705 at 5729.319 kb on + strand, within QEN71_RS25705 at 5729.409 kb on - strand at 5729.409 kb on - strand at 5729.409 kb on - strand at 5729.409 kb on - strand at 5729.409 kb on - strand at 5729.409 kb on - strand at 5729.411 kb on + strand at 5729.412 kb on - strand at 5729.412 kb on - strand at 5729.412 kb on - strand at 5729.424 kb on + strand at 5729.466 kb on + strand at 5729.467 kb on - strand at 5729.472 kb on + strand at 5729.573 kb on + strand, within QEN71_RS25710 at 5729.620 kb on + strand, within QEN71_RS25710 at 5729.620 kb on + strand, within QEN71_RS25710 at 5729.620 kb on + strand, within QEN71_RS25710 at 5729.620 kb on + strand, within QEN71_RS25710 at 5729.620 kb on + strand, within QEN71_RS25710 at 5729.620 kb on + strand, within QEN71_RS25710 at 5729.621 kb on - strand, within QEN71_RS25710 at 5729.621 kb on - strand, within QEN71_RS25710 at 5729.621 kb on - strand, within QEN71_RS25710 at 5729.622 kb on + strand, within QEN71_RS25710 at 5729.623 kb on - strand, within QEN71_RS25710 at 5729.623 kb on - strand, within QEN71_RS25710 at 5729.642 kb on - strand, within QEN71_RS25710 at 5729.729 kb on + strand, within QEN71_RS25710 at 5729.730 kb on - strand, within QEN71_RS25710 at 5729.795 kb on + strand, within QEN71_RS25710 at 5729.795 kb on + strand, within QEN71_RS25710 at 5729.796 kb on - strand, within QEN71_RS25710 at 5729.796 kb on - strand, within QEN71_RS25710 at 5729.828 kb on - strand, within QEN71_RS25710 at 5729.828 kb on - strand, within QEN71_RS25710 at 5729.828 kb on - strand, within QEN71_RS25710
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM remove 5,726,817 + QEN71_RS25695 0.39 +0.2 5,726,817 + QEN71_RS25695 0.39 -1.5 5,726,818 - QEN71_RS25695 0.39 +0.2 5,726,818 - QEN71_RS25695 0.39 -0.6 5,726,818 - QEN71_RS25695 0.39 -0.8 5,726,818 - QEN71_RS25695 0.39 -2.0 5,726,919 + QEN71_RS25695 0.45 -1.8 5,727,009 + QEN71_RS25695 0.51 -1.6 5,727,010 - QEN71_RS25695 0.51 -0.4 5,727,010 - QEN71_RS25695 0.51 +0.5 5,727,022 - QEN71_RS25695 0.51 -0.8 5,727,022 - QEN71_RS25695 0.51 +0.2 5,727,080 - QEN71_RS25695 0.55 -1.6 5,727,175 - QEN71_RS25695 0.61 -1.2 5,727,255 + QEN71_RS25695 0.66 -0.1 5,727,255 + QEN71_RS25695 0.66 -0.8 5,727,255 + QEN71_RS25695 0.66 +1.0 5,727,255 + QEN71_RS25695 0.66 +0.2 5,727,255 + QEN71_RS25695 0.66 -0.1 5,727,255 + QEN71_RS25695 0.66 -1.0 5,727,256 - QEN71_RS25695 0.66 -0.1 5,727,256 - QEN71_RS25695 0.66 -0.1 5,727,256 - QEN71_RS25695 0.66 -0.4 5,727,299 + QEN71_RS25695 0.69 -0.8 5,727,300 - QEN71_RS25695 0.69 -2.1 5,727,374 + QEN71_RS25695 0.73 -0.6 5,727,375 - QEN71_RS25695 0.73 -0.6 5,727,522 + QEN71_RS25695 0.82 -0.8 5,727,523 - QEN71_RS25695 0.82 +0.2 5,727,523 - QEN71_RS25695 0.82 -1.0 5,727,599 + QEN71_RS25695 0.87 -0.1 5,727,600 - QEN71_RS25695 0.87 +0.1 5,727,618 + QEN71_RS25695 0.88 +0.2 5,727,619 - QEN71_RS25695 0.88 -0.6 5,727,680 - -1.1 5,727,680 - -0.1 5,727,757 + -1.8 5,727,758 - +0.2 5,727,758 - -0.8 5,727,758 - +0.2 5,727,806 + -1.3 5,727,836 + +1.9 5,727,836 + -1.0 5,727,836 + -0.4 5,727,836 + -0.6 5,727,837 - -0.2 5,727,837 - +1.2 5,727,837 - +0.3 5,727,858 + -0.6 5,727,858 + -0.2 5,727,859 - -1.8 5,727,859 - +0.5 5,728,124 + QEN71_RS25700 0.29 -1.1 5,728,125 - QEN71_RS25700 0.29 -0.1 5,728,127 + QEN71_RS25700 0.29 +0.2 5,728,128 - QEN71_RS25700 0.29 -1.4 5,728,244 + QEN71_RS25700 0.40 -0.4 5,728,245 - QEN71_RS25700 0.40 +1.5 5,728,245 - QEN71_RS25700 0.40 -0.4 5,728,503 - QEN71_RS25700 0.64 +1.9 5,728,570 - QEN71_RS25700 0.70 -1.4 5,728,645 - QEN71_RS25700 0.77 -0.8 5,728,646 + QEN71_RS25700 0.77 -0.1 5,728,646 + QEN71_RS25700 0.77 -1.0 5,728,646 + QEN71_RS25700 0.77 -0.6 5,728,646 + QEN71_RS25700 0.77 +0.2 5,728,647 - QEN71_RS25700 0.77 +0.2 5,728,647 - QEN71_RS25700 0.77 -1.5 5,728,647 - QEN71_RS25700 0.77 -1.0 5,728,647 - QEN71_RS25700 0.77 -0.1 5,728,647 - QEN71_RS25700 0.77 -1.0 5,728,647 - QEN71_RS25700 0.77 -1.5 5,728,733 - QEN71_RS25700 0.85 -0.8 5,728,760 + QEN71_RS25700 0.87 -0.8 5,728,806 + +0.5 5,728,807 - -0.1 5,728,808 + -0.8 5,728,808 + -1.7 5,728,809 - -0.1 5,728,809 - -1.6 5,728,822 + -1.8 5,728,823 - -0.4 5,728,866 + -2.0 5,728,866 + +0.9 5,728,869 - -1.8 5,728,869 - +0.4 5,728,915 + -1.1 5,728,915 + -1.0 5,728,925 + -2.4 5,728,925 + -1.7 5,729,012 + -0.1 5,729,012 + -0.4 5,729,013 - -0.2 5,729,031 - QEN71_RS25705 0.11 +0.2 5,729,033 + QEN71_RS25705 0.11 +0.2 5,729,034 - QEN71_RS25705 0.11 +0.2 5,729,034 - QEN71_RS25705 0.11 +2.7 5,729,124 + QEN71_RS25705 0.33 +0.2 5,729,125 - QEN71_RS25705 0.34 -0.8 5,729,272 - QEN71_RS25705 0.69 +1.3 5,729,277 - QEN71_RS25705 0.71 -0.4 5,729,277 - QEN71_RS25705 0.71 -0.0 5,729,277 - QEN71_RS25705 0.71 +1.5 5,729,277 - QEN71_RS25705 0.71 -0.1 5,729,282 + QEN71_RS25705 0.72 +0.2 5,729,282 + QEN71_RS25705 0.72 +1.0 5,729,282 + QEN71_RS25705 0.72 +0.2 5,729,283 - QEN71_RS25705 0.72 +1.2 5,729,298 + QEN71_RS25705 0.76 +0.2 5,729,319 + QEN71_RS25705 0.81 -0.8 5,729,409 - -0.1 5,729,409 - -1.2 5,729,409 - -0.7 5,729,409 - -0.0 5,729,409 - -1.4 5,729,409 - -2.3 5,729,411 + +0.9 5,729,412 - -2.3 5,729,412 - -0.4 5,729,412 - +0.3 5,729,424 + -1.1 5,729,466 + -0.1 5,729,467 - -0.6 5,729,472 + -1.3 5,729,573 + QEN71_RS25710 0.19 -1.5 5,729,620 + QEN71_RS25710 0.24 +0.2 5,729,620 + QEN71_RS25710 0.24 -0.8 5,729,620 + QEN71_RS25710 0.24 +0.2 5,729,620 + QEN71_RS25710 0.24 +1.2 5,729,620 + QEN71_RS25710 0.24 +0.2 5,729,620 + QEN71_RS25710 0.24 -1.0 5,729,621 - QEN71_RS25710 0.24 -1.3 5,729,621 - QEN71_RS25710 0.24 -0.4 5,729,621 - QEN71_RS25710 0.24 -0.1 5,729,622 + QEN71_RS25710 0.24 +0.0 5,729,623 - QEN71_RS25710 0.25 +0.2 5,729,623 - QEN71_RS25710 0.25 +0.2 5,729,642 - QEN71_RS25710 0.26 -0.1 5,729,729 + QEN71_RS25710 0.35 -0.6 5,729,730 - QEN71_RS25710 0.35 +0.2 5,729,795 + QEN71_RS25710 0.42 -0.4 5,729,795 + QEN71_RS25710 0.42 -0.1 5,729,796 - QEN71_RS25710 0.42 +0.7 5,729,796 - QEN71_RS25710 0.42 +0.3 5,729,828 - QEN71_RS25710 0.46 -1.3 5,729,828 - QEN71_RS25710 0.46 -1.0 5,729,828 - QEN71_RS25710 0.46 -1.3
Or see this region's nucleotide sequence